Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o09f
         (639 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putativ...    59   3e-09
At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1 f...    37   0.013
At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family si...    32   0.28 
At1g79360.1 68414.m09248 transporter-related low similarity to S...    30   1.5  
At4g38830.1 68417.m05497 protein kinase family protein contains ...    28   4.5  
At5g54960.1 68418.m06845 pyruvate decarboxylase, putative strong...    27   7.9  
At4g36550.1 68417.m05190 U-box domain-containing protein low sim...    27   7.9  
At2g42710.1 68415.m05289 ribosomal protein L1 family protein           27   7.9  

>At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putative
           SP:Q9LD45: Bax inhibitor-1 (BI-1) (AtBI-1). [Mouse-ear
           cress]             {Arabidopsis thaliana}
          Length = 247

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 35/99 (35%), Positives = 52/99 (52%)
 Frame = +2

Query: 338 RLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNG 517
           ++ P V+ HLK VY TL    V+++ G Y+ +      G L+ I   G M+ L++ P   
Sbjct: 27  QISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNI-GGILTTIGCIGTMIWLLSCPPYE 85

Query: 518 KNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITA 634
                RL  L    +  G S+GPL++    VDPSI+ITA
Sbjct: 86  HQK--RLSLLFVSAVLEGASVGPLIKVAIDVDPSILITA 122


>At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1
           family protein similar to SP|Q9LD45 Bax inhibitor-1
           (BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam
           profile PF01027: Uncharacterized protein family UPF0005
          Length = 247

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 26/88 (29%), Positives = 45/88 (51%)
 Frame = +2

Query: 371 NVYATLMMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLL 550
           ++Y TL    ++++ G Y+ M      G +S +  +G+M+ L  T       N+ L  L 
Sbjct: 42  DLYLTLFFALLASAIGAYIHMVWNI-GGNVSTLGFSGIMIWLRFTL---YEPNM-LYLLF 96

Query: 551 GFGLTSGMSMGPLLEYVSVVDPSIIITA 634
            F L  G S+GP++  V   D S+++TA
Sbjct: 97  LFALLKGASVGPMIMLVIDFDSSVLVTA 124


>At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family
           similar to SP|Q9LD45 Bax inhibitor-1 (BI-1) (AtBI-1)
           {Arabidopsis thaliana}
          Length = 187

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 530 LRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITA 634
           +R   LL FG+  G S+GP ++    +D SI+ITA
Sbjct: 32  IRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITA 66


>At1g79360.1 68414.m09248 transporter-related low similarity to
           SP|O76082 Organic cation/carnitine transporter 2 (Solute
           carrier family 22, member 5) (High-affinity
           sodium-dependent carnitine cotransporter) {Homo
           sapiens}; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 527

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/72 (30%), Positives = 35/72 (48%)
 Frame = +2

Query: 389 MMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTS 568
           M+T  S +  VY  +  RF  GF  A +G     ++++T   GK    R+G +  FG   
Sbjct: 157 MLTVFSPNIWVYAVL--RFVNGFGRATIGT--CALVLSTELVGKKWRGRVGIMSFFGFML 212

Query: 569 GMSMGPLLEYVS 604
           G    PL+ Y++
Sbjct: 213 GFLSLPLMAYMN 224


>At4g38830.1 68417.m05497 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 665

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   ESLATPVMTYGIRVFQSSTSEFSLVNKI 84
           E+++T  M +   V Q +TS FSL NK+
Sbjct: 323 ENISTDSMKFDFSVLQDATSHFSLENKL 350


>At5g54960.1 68418.m06845 pyruvate decarboxylase, putative strong
           similarity to pyruvate decarboxylase 1 [Vitis vinifera]
           GI:10732644; contains InterPro entry IPR000399: Pyruvate
           decarboxylase
          Length = 607

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 4   SLATPVMTYGIRVFQSSTSEFSLVNKITPHHPILFTAIFSTAQNEN 141
           ++  P  T  +R FQ+ T   +++N +   H ++ TAI STA  E+
Sbjct: 157 TIGLPDFTQELRCFQAVTCFQAVINNLEEAHELIDTAI-STALKES 201


>At4g36550.1 68417.m05190 U-box domain-containing protein low
           similarity to immediate-early fungal elicitor protein
           CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
           profile PF04564: U-box domain
          Length = 577

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +1

Query: 130 QNENYLFVLL*LV--KLEYCCCVILKAINI 213
           + EN + +LL L   K+EYCC V+ +A +I
Sbjct: 459 EQENAISILLQLCVQKIEYCCLVVREATDI 488


>At2g42710.1 68415.m05289 ribosomal protein L1 family protein
          Length = 415

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 470 VGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMG 583
           VGA +  +L+A P   K T+   GY+  F L S M  G
Sbjct: 357 VGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKG 394


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,907,675
Number of Sequences: 28952
Number of extensions: 284752
Number of successful extensions: 573
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)