Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o07r
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 93 3e-19
SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 92 4e-19
SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34) 68 1e-11
SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 38 0.009
SB_33861| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 29 4.1
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 29 5.4
SB_49057| Best HMM Match : DUF346 (HMM E-Value=7.2) 28 7.2
SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.2
>SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 313
Score = 92.7 bits (220), Expect = 3e-19
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Frame = -2
Query: 644 VLNTVDRILEGSAYLDAFDWIVVPVVNPDGYEYTHTNLRLWSKSRSTRSNLGIICPGVNI 465
+L T D + + LD ++W+++PV+N DGYEYT T R+W K+R+ G C GV+
Sbjct: 94 ILETGDSDSDVTDMLDNYEWVILPVLNVDGYEYTRTKDRMWRKTRTP----GTKCVGVDP 149
Query: 464 NRNFDLDWXXXXXXXXXXSHLYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNNGGFL 285
NRNF+ + S +Y G + FSE T + + E R + Y+
Sbjct: 150 NRNFNYRFGVTGTSNNECSQIYRGKQAFSEKVTYNVAKFLYENRHRLKGYIDFHAYSQMF 209
Query: 284 TYPWHFEKAASGMFRQHHLTGIDAVNAM----NENYILGAASVVFGERASGTSVDYVRSN 117
PW + A + +H AVNA+ Y+ G AS A T+
Sbjct: 210 LSPWGYTDAKPSNYTEHMKAMTAAVNALQAVHGTRYVFGPASTTIYPTAGDTTDWTYGVL 269
Query: 116 GLLYTFNIDIVQRGN--GVLIPAGEIRSIVDDVWRGISAM 3
G ++++ +++ GN G ++P +I + + + A+
Sbjct: 270 GCVHSYCVELRPTGNPPGFILPPAQIIPTGQETFAALKAL 309
>SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 249
Score = 92.3 bits (219), Expect = 4e-19
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Frame = -2
Query: 710 AIRPVVIIEAGIIPNEWIT-------IPAVLNTVDRILEGSAYLDAFDWIVVPVVNPDGY 552
A +PV + GI EW++ I +++ ++ + ++ LD D+I+ P+VNPDGY
Sbjct: 67 ADKPVFFVNCGIHAREWVSPATCMYIIHELVSKYEKDAKVTSVLDKMDFIIHPMVNPDGY 126
Query: 551 EYTHTNL--RLWSKSRSTRSNLGIICPGVNINRNFDLDWXXXXXXXXXXSHLYAGVEPFS 378
+TH N RLW KSR S G C G ++NRNF W S +Y G P+S
Sbjct: 127 VFTHKNESNRLWRKSRKPTSKAG--CIGADLNRNFGYQWGKPGSSDKPCSFIYRGEAPYS 184
Query: 377 EPETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASGMFRQHHLTGIDAVN 207
E E K + + + + YL + + G YPW + ++ + ++ G N
Sbjct: 185 EVEVKNMAAFLWKLAPNLKGYLDIHSYGQLWMYPWGYTNQSTQVEKEMDTHGATRAN 241
>SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 86.6 bits (205), Expect = 2e-17
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Frame = -2
Query: 704 RPVVIIEAGIIPNEWITIPAVLNTVDRILEG-------SAYLDAFDWIVVPVVNPDGYEY 546
+PV + GI EWIT + + + + + LD D+I++PV+N DGY Y
Sbjct: 137 KPVFFMNCGIHAREWITPATCMYIITQFITKYRSDKSVTEVLDKMDFIIMPVLNADGYVY 196
Query: 545 THTNLRLWSKSR--STRSNLG-IICPGVNINRNFDLDWXXXXXXXXXXSHLYAGVEPFSE 375
T T R+W K+R + +S G C G + NRN+ W S + G SE
Sbjct: 197 TWTGNRMWRKTRKPNIQSWWGQKTCYGTDPNRNWGYKWGLPGASSNPCSDTFRGKTAQSE 256
Query: 374 PETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASGMFRQ---HHLTGIDAV-N 207
E + + G R + Y+ + F PW + A + ++ G+DA+
Sbjct: 257 VEVDNVAKFLKGLGPRVKGYMDIHAYSQFWMIPWGYTTANAKDHKELMRVSKIGVDAIRQ 316
Query: 206 AMNENYILGAASVVFGERASGTSVDYVRSN-GLLYTFNIDIVQRGN-GVLIPAGEIRSIV 33
Y G++S + + SG+S DY + + Y+F +++ G G L+P G+I
Sbjct: 317 TYGTAYRYGSSSNII-YKNSGSSKDYTYGHLNIKYSFALELRDTGRYGFLLPPGQILPTA 375
Query: 32 DDVWRGISAM 3
+ + GI AM
Sbjct: 376 LETFNGIIAM 385
>SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 81.0 bits (191), Expect = 1e-15
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Frame = -2
Query: 704 RPVVIIEAGIIPNEWITIPAVLNTVDRILEG-------SAYLDAFDWIVVPVVNPDGYEY 546
+PV + GI EW++ + ++L ++ LD D++++PV+NPDGY +
Sbjct: 9 KPVFFMNCGIHAREWVSPATCMYIAKQLLSRYGKDANVTSVLDKMDFVIMPVLNPDGYVF 68
Query: 545 THTNLRLWSKSRSTRSNLGIICPGVNINRNFDLDWXXXXXXXXXXSHLYAGVEPFSEPET 366
T R W K+ + N G C G + NRN+D W + Y G FSE E
Sbjct: 69 TWERQRFWRKT--LKPNSGTFCVGTDPNRNWDYKWGAEGASTDPCADDYRGPHAFSEIEI 126
Query: 365 KLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASGMFRQHHLTGIDAVNAMNENYI 186
+ + + G R + Y+ + F PW + S +++ N + Y
Sbjct: 127 VNVAKYLKKLGDRIKGYMDIHAYSQFWMIPWGHTQTPSKDYQEL------VRNLKHPPYS 180
Query: 185 LGAASVVFGERASGTSVDYV-RSNGLLYTFNIDIVQRG-NGVLIPAGEIRSIVDDVWRGI 12
+ V SG S DY + G+ Y+F +++ G G L+P +I + + G+
Sbjct: 181 RSPRTDV----NSGGSKDYTYGALGIKYSFALELRDTGKEGFLLPPEQIIPTALETFNGV 236
Query: 11 SA 6
A
Sbjct: 237 IA 238
>SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34)
Length = 235
Score = 67.7 bits (158), Expect = 1e-11
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Frame = -2
Query: 611 SAYLDAFDWIVVPVVNPDGYEYTHTNLRLWSKSRSTRSNLGIICPGVNINRNFDLDWXXX 432
+A LD D++++P++N DGY YTHT+ R+W K+R C G + NRN+ W
Sbjct: 12 TAMLDKMDFVIMPILNVDGYVYTHTHNRMWRKTRKPYGG----CYGADPNRNWSFKWGGV 67
Query: 431 XXXXXXXSHLYAGVEPFSEPETKLLKHLIDEYGTRTRL--YLSLQNNGGFLTYPWHFEKA 258
Y G PFSE E + + Y R L Y+ + W F +A
Sbjct: 68 GTSSDPCRDTYRGPRPFSEVEALNVARYL--YRNRKSLIGYMDIHAYSQLWMTSWGFNRA 125
Query: 257 ASGMFR-QHHLTGIDAVNAMNE----NYILGAASVV 165
+ + G AV A+ + +Y LG +S++
Sbjct: 126 YPPAYNTKVKPAGQKAVEALRKVYGTHYRLGPSSII 161
>SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Frame = -2
Query: 740 SILKISRATTAIRPVVIIEAGIIPNEWITIPAVLNTVDRILEG-------SAYLDAFDWI 582
S+ ++ A +PV + GI EWI+ + +D+++ ++ LD D++
Sbjct: 466 SLFQVKGAYKPNKPVFYWQCGIHAREWISPATCMYAIDQMVTKYGKDSGITSMLDKMDFV 525
Query: 581 VVPVVNPDGYEYTHT 537
++PVVNPDGYEYT T
Sbjct: 526 ILPVVNPDGYEYTWT 540
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 404 LYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASGMFRQH 234
+Y G PFSE ET+ + + + R R Y+ + G PW F K +R+H
Sbjct: 13 IYPGSRPFSEVETRNVARYLYKKRKRLRAYVDFHSYGQLWMSPWGFTKKFPPNYRRH 69
>SB_33861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1205
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 155 RASGTSVDYVRSNGLLYTFNIDIVQRGNGVLIPAGE 48
R SG S DYV + + I +V GNG LI AG+
Sbjct: 1017 RLSGQSADYVPATPIQENGTIKLVFGGNGCLITAGQ 1052
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 29.1 bits (62), Expect = 4.1
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Frame = -2
Query: 581 VVPVVNPDGYE--YTHTNLRLWSKSRSTRSNLGIICPGVNINRNFDLDWXXXXXXXXXXS 408
++P +NPDGYE + N + W RS N V++NRNF +
Sbjct: 732 LLPSMNPDGYELAFKGDNRKNWIIGRSNSKN-------VDLNRNFPDQFFKSSTG----- 779
Query: 407 HLYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASG 249
EP +PETK + I E LS +GG L + F+ + SG
Sbjct: 780 ------EP--QPETKAVMKWIKE----VPFVLSANLHGGSLVANYPFDDSPSG 820
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 633 CIQNCRYSYPFIRDNTSFYYHHRS 704
C+Q+CRY+ PF +N Y S
Sbjct: 741 CLQSCRYNIPFFSENYGPVYEEMS 764
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 719 ATTAIRPVVIIEAGIIPNEW--ITIPAVLNTVDRILEGSAYLDAFDWIVV 576
A A+ + E IP E ITIPAV + +L GSA L AF + V
Sbjct: 302 AAAAVSAKIQAEERGIPPELAPITIPAVTTVITSMLPGSAGLVAFPTVAV 351
>SB_49057| Best HMM Match : DUF346 (HMM E-Value=7.2)
Length = 147
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 621 YSIHCIQNCRYSYPFIRDNTSFYYHHR 701
YSIH I +SYP +R N + HHR
Sbjct: 101 YSIHSISQPSWSYP-VRTNATSASHHR 126
>SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1176
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 444 VQVEIAIDVDPRADDAKVTSGASRFRPE---SQIGMSIFISIRINNRYDNPIKCIQIGRP 614
V+V + + P +T+ PE + + S + + ++N DNP+ C Q+GRP
Sbjct: 294 VRVHVRASLAPERRHQLITAAIHWTLPEDIHALLKESFKVYVLVDN--DNPVICSQLGRP 351
Query: 615 --FQYSIH 632
F +++H
Sbjct: 352 ADFYWTVH 359
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,323,706
Number of Sequences: 59808
Number of extensions: 523938
Number of successful extensions: 1377
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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