Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o07r
         (759 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42320.1 68418.m05150 zinc carboxypeptidase family protein co...    45   6e-05
At1g32150.1 68414.m03955 bZIP transcription factor family protei...    30   1.9  
At5g44530.1 68418.m05455 subtilase family protein contains Pfam ...    29   4.4  
At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR) id...    29   4.4  
At1g16110.1 68414.m01931 wall-associated kinase, putative contai...    28   7.7  

>At5g42320.1 68418.m05150 zinc carboxypeptidase family protein
           contains Pfam domain, PF00246: Zinc carboxypeptidase
          Length = 461

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
 Frame = -2

Query: 476 GVNINRNFDLDWXXXXXXXXXXSHLYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNN 297
           GV++NRN+ +DW               G  PFSEPET++++ L   +     + +     
Sbjct: 207 GVDLNRNWGVDWGKKEKDYDPSEE-NPGTAPFSEPETQIMRKLAISFDPHIWINVHSGME 265

Query: 296 GGFLTYPWHFEKAASGMFRQHHLTGIDAVNAM--NENYILGAASVVFGERASGTSVDYV 126
             F+ Y  H      G+  Q   T ++ +N    ++  ++G+     G  A GT+ DY+
Sbjct: 266 ALFMPYD-HKNITPEGLPSQKMRTLLEKLNKFHCHDRCMIGSGGGSVGYLAHGTATDYI 323


>At1g32150.1 68414.m03955 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription factor
          Length = 389

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = -2

Query: 446 DWXXXXXXXXXXSHLYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYP 276
           DW           H Y    P   P    ++H++  YGT    Y+++   GG   +P
Sbjct: 48  DWSGFQAYSPMPPHGYVASSPQPHPYMWGVQHMMPPYGTPPHPYVTMYPPGGMYAHP 104


>At5g44530.1 68418.m05455 subtilase family protein contains Pfam
           profiles: PF00082 subtilase family
          Length = 840

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  NSSPNIIYNTSNFTCRYQNTVSSLYNINIESI 107
           N S  +++N + F C   NT  S +++N+ SI
Sbjct: 715 NGSDTVVFNYTGFRCPANNTPVSGFDLNLPSI 746


>At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR)
           identical to sulfite reductase [Arabidopsis thaliana]
           GI:804953, GI:2584721
          Length = 642

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 406 TFMLESNPSQNQKPNS*SI**TNMVPELGCTYLFRTTEGS*HIHGILRRLLVGCLGSII 230
           +FML +     + PN   +   ++  E G   L  TT  +  +HG+L++ L   + SII
Sbjct: 130 SFMLRTKNPSGKVPNQLYLTMDDLADEFGIGTLRLTTRQTFQLHGVLKQNLKTVMSSII 188


>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
           similarity to wall-associated kinase 2 GI:4826399 from
           [Arabidopsis thaliana]
          Length = 642

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +3

Query: 567 NNRYDNPIKCIQIGRPFQYSIHCIQNCRYSYPFIRDNTSFYYHHRSYGGGGPGYLQY 737
           ++RY NP+ C  + R   YS     +C Y Y       S+   + +YG  G  YL++
Sbjct: 265 DSRYRNPLGCRNMTRYSSYSSFDKCSCEYDY---FSGMSYRICYCNYGYTGNPYLRH 318


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,569
Number of Sequences: 28952
Number of extensions: 370965
Number of successful extensions: 939
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)