Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o07f
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 32 0.005
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 26 0.25
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.25
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.44
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.44
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.44
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.44
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 3.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 4.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 7.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 7.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 7.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 7.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 7.2
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 21 7.2
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.005
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 270 EEQLEKLGIERSLHVTDVFEFLKEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYA 449
E + K G D E + K+P + + N+ Y+++ YN N+ N +Y
Sbjct: 286 EREYRKYGETSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYN 345
Query: 450 NN 455
NN
Sbjct: 346 NN 347
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 26.2 bits (55), Expect = 0.25
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 357 MLRNNR--NFDYTDFYRYNEILNHLNTLKESYANNPNINVDIIQHGVTDQNR 506
++RN+R NFD D YN N +S N N + D H NR
Sbjct: 408 LIRNSRCANFDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNNR 459
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 360 LRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ NN N++ ++ YN N+ N K+ Y N
Sbjct: 90 IHNNNNYNNNNYNNYNYNNNNYNNYKKLYYN 120
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIVSSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYAN 452
+ K+P + + N++Y+++ YN N+ N K+ Y N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNN-NNNYNNYKKLYYN 112
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.4 bits (53), Expect = 0.44
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRYNEI--LNHLNTLKESYANNPNINVDII 479
+ K+P + + N+ Y+++ YN N+ N K+ Y N IN++ I
Sbjct: 308 RSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLYYKNYIINIEQI 357
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 164 LVLLLLGRKGQVVNPEPHILLIFS 93
LV L+LG G++ NP P + + S
Sbjct: 74 LVGLILGFLGRLANPTPQSITLIS 97
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 171 LLKSDLIEFWQRPNLQ 218
LLK + EFW+R LQ
Sbjct: 179 LLKDPVKEFWERRTLQ 194
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 171 LLKSDLIEFWQRPNLQ 218
LLK + EFW+R LQ
Sbjct: 232 LLKDPVKEFWERRTLQ 247
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 66 SLAIIAVVSAKNEEYMGFRVYNLTFSTQEQQDKFHLLKSDLIEF 197
SLA+ A+ A YM + Q D FH L S+ ++
Sbjct: 188 SLAVQAIDLANTLVYMADHKGDALIVYQNADDSFHRLTSNTFDY 231
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 302 PFDTQFFELLFEPW 261
PFD Q L+FE W
Sbjct: 150 PFDVQECPLIFESW 163
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 396 YRYNEILNHLNTLKESYANNPNINVDII 479
Y+Y+ N+ N K+ Y N IN++ I
Sbjct: 89 YKYSNYNNYNNYNKKLYYKNYIINIEQI 116
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 340 SFKNSNTSVTCKLLSI 293
S +N NTS CKL +
Sbjct: 264 SSENQNTSAECKLAKV 279
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRY-NEILNHLNTLKESYAN 452
+ K+P + + N+ Y+++ Y N N+ N K Y N
Sbjct: 75 RSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRY-NEILNHLNTLKESYAN 452
+ K+P + + N+ Y+++ Y N N+ N K Y N
Sbjct: 75 RSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRY-NEILNHLNTLKESYAN 452
+ K+P + + N+ Y+++ Y N N+ N K Y N
Sbjct: 75 RSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 KEKDPTPMLRNNRNFDYTDFYRY-NEILNHLNTLKESYAN 452
+ K+P + + N+ Y+++ Y N N+ N K Y N
Sbjct: 75 RSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYN 114
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 340 SFKNSNTSVTCKLLSI 293
S +N NTS CKL +
Sbjct: 14 SSENQNTSAECKLAKV 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,619
Number of Sequences: 438
Number of extensions: 4375
Number of successful extensions: 27
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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