Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o07f
(613 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g50170.1 68416.m05485 hypothetical protein contains Pfam prof... 32 0.26
At1g18800.1 68414.m02343 nucleosome assembly protein (NAP) famil... 31 0.60
At1g32540.1 68414.m04016 zinc finger protein, putative similar t... 30 1.4
At5g10470.1 68418.m01213 kinesin motor protein-related TH65 prot... 29 1.8
At1g64590.1 68414.m07321 short-chain dehydrogenase/reductase (SD... 29 1.8
At1g01110.1 68414.m00014 expressed protein contains Prosite PS00... 29 2.4
At3g47850.1 68416.m05216 expressed protein 29 3.2
At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.2
At1g55430.1 68414.m06340 DC1 domain-containing protein contains ... 29 3.2
At5g36035.1 68418.m04341 hypothetical protein 28 4.2
At1g35100.1 68414.m04351 hypothetical protein 28 4.2
At1g24938.1 68414.m03113 hypothetical protein 28 4.2
At5g40450.1 68418.m04905 expressed protein 27 7.4
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont... 27 7.4
At3g42080.1 68416.m04318 hypothetical protein hypothetical prote... 27 7.4
At2g15490.2 68415.m01773 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.4
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.4
At1g36320.1 68414.m04514 expressed protein similar to hypothetic... 27 7.4
At3g48070.1 68416.m05241 expressed protein 27 9.8
At3g43610.1 68416.m04640 tubulin family protein 27 9.8
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 27 9.8
At1g75240.1 68414.m08741 zinc finger homeobox family protein / Z... 27 9.8
At1g48820.1 68414.m05463 terpene synthase/cyclase family protein... 27 9.8
>At3g50170.1 68416.m05485 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 541
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 231 GQAMVPPSH---FPWFEEQLEKLGIERSLHVTDVF-EFLKEKDPTPMLRN 368
G+A+ P W E+ L+ LG + LH DVF L + PTP R+
Sbjct: 289 GEALTKPDQSKLMNWLEKSLDTLGDKGELHCLDVFRRSLLQSSPTPNTRS 338
>At1g18800.1 68414.m02343 nucleosome assembly protein (NAP) family
protein similar to SP|Q01105|SET protein (HLA-DR
associated protein II) (PHAPII) (Phosphatase 2A
inhibitor I2PP2A) {Homo sapiens}; contains Pfam profile
PF00956: Nucleosome assembly protein (NAP)
Length = 256
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 NLQRNVVGQAMVPPSHFPWFEEQLEKLGIERSLHVTDVFEFLKEK-DPTPMLRNNRNFDY 386
N ++N +A+ S F WF + K +E + V + +KE P P+ N + D
Sbjct: 166 NHEKNGNKRALPEESFFTWFSDAQHKEDVEDEMQDEQVADIIKEDLWPNPLTYFNNDADE 225
Query: 387 TDF 395
DF
Sbjct: 226 EDF 228
>At1g32540.1 68414.m04016 zinc finger protein, putative similar to
zinc-finger protein Lsd1 [Arabidopsis thaliana]
gi|1872521|gb|AAC49660
Length = 187
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 191 NQIAFKQMELVLLLLGRKGQVVNPEPHILL 102
NQI F + VLL +G+ ++ PEPH+ +
Sbjct: 6 NQI-FSDSQFVLLFMGKNCSIIFPEPHLFI 34
>At5g10470.1 68418.m01213 kinesin motor protein-related TH65
protein, Arabidopsis thaliana, EMBL:AJ001729; contains
Pfam profile PF00225: Kinesin motor domain
Length = 1273
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +3
Query: 375 NFDYTDFYRYNEILNHLNTLKESYANNPNINVD----IIQHGVTDQNRPLVYLKISRA 536
+F + F YNE + L L E+ +N PNIN+D +I+ G + PL +L + ++
Sbjct: 265 SFSLSVFEIYNEQIRDL--LSETQSNLPNINMDLHESVIELGQEKVDNPLEFLGVLKS 320
>At1g64590.1 68414.m07321 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 334
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 363 RNNRNFDYTDFYRYNEILNHLNTLKES---YANNPNINVDIIQHGV 491
RNNRN+D T Y +++ N L+T++ S + + N+ + + G+
Sbjct: 194 RNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGI 239
>At1g01110.1 68414.m00014 expressed protein contains Prosite
PS00165: Serine/threonine dehydratases
pyridoxal-phosphate attachment site
Length = 364
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 282 RVALRTMGNEKAEPWPDRPHCVVDLVAARIQSNR 181
R ++ G+ AE W DRPH +D V +Q R
Sbjct: 51 RQSMSREGSSAAEDWDDRPH-TIDAVKVMLQRRR 83
>At3g47850.1 68416.m05216 expressed protein
Length = 322
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 348 PTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYANNPNINVDIIQHGVTDQNRPLV 515
P + +RN + DF +L+ NPN+N+ + VTDQ P++
Sbjct: 18 PRRWIMPDRNLSFKDF---KSLLHRRKKALSRLPLNPNLNLSVKTELVTDQENPIL 70
>At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 372
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 237 AMVPPSHFPWFEEQLEKLGIERSL-HVTDVF 326
A+V FPW E EKLG+ R + H T F
Sbjct: 16 ALVADMFFPWATESAEKLGVPRLVFHGTSFF 46
>At1g55430.1 68414.m06340 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 489 LHVV*CLR*YLDC---LRKILLRCLDDLRFHCTYKNRCSQNFC 370
LHVV + Y D + K++ C+ LR+ C + RC + C
Sbjct: 427 LHVVPTIDTYTDPNMPITKVIFNCIGCLRYGCGFHYRCHEKGC 469
>At5g36035.1 68418.m04341 hypothetical protein
Length = 231
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 160 TSSICLKAI*LNSGSDQIYNAMWSVRPWFRLLISHGSKSN---SKNWVSKG 303
TSS CL +I +S + + ++ P L++SH S+ KNW+ G
Sbjct: 3 TSSKCLHSITQSSDTQRKIARLYIPEPILALIVSHVSEEGIEALKNWIKSG 53
>At1g35100.1 68414.m04351 hypothetical protein
Length = 231
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 160 TSSICLKAI*LNSGSDQIYNAMWSVRPWFRLLISHGSKSN---SKNWVSKG 303
TSS CL +I +S + + ++ P L++SH S+ KNW+ G
Sbjct: 3 TSSKCLHSITQSSDTQRKIARLYIPEPILALIVSHVSEEGIEALKNWIKSG 53
>At1g24938.1 68414.m03113 hypothetical protein
Length = 317
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 160 TSSICLKAI*LNSGSDQIYNAMWSVRPWFRLLISHGSKSN---SKNWVSKG 303
TSS CL +I +S + + ++ P L++SH S+ KNW+ G
Sbjct: 3 TSSKCLHSITQSSDTQRKIARLYIPEPILALIVSHVSEEGIEALKNWIKSG 53
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 198 WQRPNLQRNVVGQAMVPPSHFPWFEEQLEKLGIERSLHVTDVFEFLKEKDPT 353
++ PN Q+ + VP EE+L+K E S + D+F +KE +PT
Sbjct: 2766 YEVPNQQKREITNE-VPSLENSKIEEELQKKD-EESENTKDLFSVVKETEPT 2815
>At4g00820.1 68417.m00113 calmodulin-binding protein-related
contains Pfam profile PF00612: IQ calmodulin-binding
motif
Length = 534
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 282 RVALRTMGNEKAEPWPDRPHCVVDLVAARIQSNR 181
R ++ G+ AE W DRPH ++ V A +Q R
Sbjct: 225 RRSMSREGSSIAEDWDDRPH-TIEEVKAMLQQRR 257
>At3g42080.1 68416.m04318 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 161
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 141 STQEQQDKFHLLKSDLIEFWQRPNLQRNVVGQ 236
ST+E+ F + +L+EFW Q N +G+
Sbjct: 67 STEEEHLIFDSVAKELLEFWTGYKAQENTIGK 98
>At2g15490.2 68415.m01773 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 270
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 237 AMVPPSHFPWFEEQLEKLGIERSL-HVTDVF 326
A+V FPW E EK+G+ R + H T F
Sbjct: 125 ALVADMFFPWATESAEKIGVPRLVFHGTSSF 155
>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 484
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 237 AMVPPSHFPWFEEQLEKLGIERSL-HVTDVF 326
A+V FPW E EK+G+ R + H T F
Sbjct: 125 ALVADMFFPWATESAEKIGVPRLVFHGTSSF 155
>At1g36320.1 68414.m04514 expressed protein similar to hypothetical
protein GB:CAB37532 from [Arabidopsis thaliana],
Length = 414
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 405 NEILNHLNTLKESYANNPN 461
NE HL+T+ ESY +NP+
Sbjct: 196 NEFFEHLHTVAESYYDNPD 214
>At3g48070.1 68416.m05241 expressed protein
Length = 319
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 340 SFKNSNTSVTCKLLSIPNFSSCSSN 266
S NS S+ + SIPNFSS SS+
Sbjct: 98 SLSNSPNSILSGMNSIPNFSSSSSS 122
>At3g43610.1 68416.m04640 tubulin family protein
Length = 1120
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 417 NHLNTLKESYANNPNINVDIIQH---GVTDQN 503
N+L+ L+ S A+N N N +++QH G D N
Sbjct: 548 NYLSALRFSVASNGNCNQNLVQHSDSGYIDNN 579
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 69 LAIIAVVS---AKNEEYMGFRVYNLTFSTQEQQDKFHL 173
LA++ VS NE+ M FRV+N++ TQE + + L
Sbjct: 585 LAVVTHVSDCLPSNEQVMEFRVFNISKMTQELKGRVAL 622
>At1g75240.1 68414.m08741 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 309
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 599 SYPFIRDNTSFYYHHRSYGGGG 534
S I + +YHH YGGGG
Sbjct: 131 SSDLISHHRHHHYHHNQYGGGG 152
>At1g48820.1 68414.m05463 terpene synthase/cyclase family protein
similar to terpene cyclase GI:9293912 from [Arabidopsis
thaliana]
Length = 561
Score = 27.1 bits (57), Expect = 9.8
Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Frame = +3
Query: 210 NLQRNVVGQAMVPPSHFPWFEEQLEKLGIERSLHVT--------------DVFEFLKEKD 347
+L+ N+ V H P F+E L+ G+E ++ T + +E+LK +D
Sbjct: 387 SLRINLQVAKWVKAGHLPSFDEYLDVAGLELAISFTFAGILMGMENVCKPEAYEWLKSRD 446
Query: 348 P------TPMLRNNRNFDYTDFYRYNEILNHLNTLKESYANNPNINVDIIQHGVTDQNRP 509
T + N F Y D R + N +N K+ Y + + V D +
Sbjct: 447 KLVRGVITKVRLLNDIFGYEDDMRRGYVTNSINCYKKQYGVTEEEAIRKLHQIVADGEKM 506
Query: 510 L--VYLKISRATTAIRPVVIIE 569
+ +LK + VVI++
Sbjct: 507 MNEEFLKPINVPYQVPKVVILD 528
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,177,063
Number of Sequences: 28952
Number of extensions: 318503
Number of successful extensions: 943
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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