Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o06f
(510 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 99 5e-20
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 97 3e-19
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 97 3e-19
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 93 4e-18
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 88 1e-16
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 82 6e-15
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 81 2e-14
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 77 2e-13
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 77 2e-13
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 75 1e-12
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 71 2e-11
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 68 1e-10
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 68 1e-10
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 68 1e-10
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 66 6e-10
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 64 2e-09
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 63 4e-09
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 61 2e-08
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 60 2e-08
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 60 3e-08
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 60 4e-08
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 60 4e-08
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 59 7e-08
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 59 7e-08
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 58 2e-07
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 55 1e-06
UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;... 54 2e-06
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 50 4e-05
UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, wh... 46 4e-04
UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;... 46 5e-04
UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lambl... 40 0.033
UniRef50_Q8SRM2 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P2; n=1; E... 40 0.043
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 38 0.10
UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus nor... 38 0.10
UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;... 36 0.71
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 36 0.71
UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1; ... 35 0.93
UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q24266 Cluster: Transcription factor btd; n=2; Drosophi... 33 3.8
UniRef50_A3DH59 Cluster: Small GTP-binding protein; n=8; Bacteri... 33 5.0
UniRef50_A0NVH7 Cluster: Sensory box/GGDEF domain/EAL domain pro... 33 5.0
UniRef50_UPI0000D9F841 Cluster: PREDICTED: hypothetical protein,... 32 6.6
UniRef50_Q2CHG3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium john... 32 6.6
UniRef50_Q6K5K0 Cluster: Myosin-like protein; n=5; Oryza sativa|... 32 6.6
UniRef50_A2QA67 Cluster: Contig An01c0330, complete genome; n=1;... 32 6.6
UniRef50_Q5DAP6 Cluster: SJCHGC05592 protein; n=2; Schistosoma j... 32 8.7
UniRef50_Q18749 Cluster: Putative uncharacterized protein ehbp-1... 32 8.7
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 99.1 bits (236), Expect = 5e-20
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+++AAYLL LGG T+P+AADV+ +L SVGIEAD+++L K+I+EL GKD+ +LIA+G E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60
Query: 259 KLSSMPVGG-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+S+P GG G MGFGLFD
Sbjct: 61 KLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 96.7 bits (230), Expect = 3e-19
Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 259 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 96.7 bits (230), Expect = 3e-19
Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 259 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 92.7 bits (220), Expect = 4e-18
Identities = 40/70 (57%), Positives = 60/70 (85%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+ +AAYLLAVLGG T P+ D++KIL+SVG EAD ++++ ++++++GKD+ +LIAAGRE
Sbjct: 1 MKVIAAYLLAVLGGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGRE 60
Query: 259 KLSSMPVGGG 288
KL+S+P GGG
Sbjct: 61 KLASVPAGGG 70
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/112 (38%), Positives = 62/112 (55%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAYLL L G ++P+A D++ +LSSVGI+AD E+L ++ EL GKD+ +LI++G +
Sbjct: 1 MKYMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQ 60
Query: 259 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVP-SGGSGAAPSAGGAAAAGGATEAAPEAAKEEEKEESDDDMGFGLFD 111
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 82.2 bits (194), Expect = 6e-15
Identities = 44/112 (39%), Positives = 60/112 (53%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M++VAAYLL V G T+P+A DV+K+L++ I+AD E+L +I EL GKDV ++IA G +
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60
Query: 259 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPSGG--AAPAAAAGGAAAGGAAEEKAEDKPAEKDEESDDDMGFGLFD 110
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/70 (48%), Positives = 54/70 (77%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+ AA+LLAVLGG P+A +++ I+ +VG + D E ++ ++ E++GKD+ +LIA+GRE
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 259 KLSSMPVGGG 288
KL+S+P GGG
Sbjct: 61 KLASVPSGGG 70
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 79.8 bits (188), Expect = 3e-14
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
MRYVAAYLLA LGG A ++ IL SVGI+AD EKL KVI EL GKD+ ++IAA
Sbjct: 1 MRYVAAYLLAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAAD-A 59
Query: 259 KLSSMPVGG 285
KL+S+P GG
Sbjct: 60 KLASVPSGG 68
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 77.4 bits (182), Expect = 2e-13
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
MRY+AAYLLAVLGG TTP DVEKIL S +E D ++ VI + GK E++IAAG E
Sbjct: 1 MRYIAAYLLAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSE 60
Query: 259 KLSSMPVGG 285
KL+ G
Sbjct: 61 KLAKFGSAG 69
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 77.4 bits (182), Expect = 2e-13
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY L VLGG ++P+A DV+K+L SVG++++ +KL ++ L GK + +LI AG
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 259 KLSSMPVGGG 288
K+SS+ G G
Sbjct: 61 KVSSLSAGAG 70
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 259 KLSSMPVGG 285
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 70.5 bits (165), Expect = 2e-11
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY L VLGG P D+ K+L G+E+ A +K V++ L GK++ +I G++
Sbjct: 1 MKYIAAYALLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQK 60
Query: 259 KLSSMPVGGG 288
+L+S+ VGGG
Sbjct: 61 QLTSLSVGGG 70
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 68.1 bits (159), Expect = 1e-10
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITEL--NGKDVEQLIAAG 252
M+++AAYLLA +GGK PA AD+EKI+++VG DA+ K V+ ++ G VE L++ G
Sbjct: 1 MKHLAAYLLAKMGGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLG 60
Query: 253 REKLSSMPVGG 285
+++++SMP G
Sbjct: 61 KKRMASMPAVG 71
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
++YVA+YLLAV G +P+ DV +L+SVG E D + L + ++GK V + I+AG +
Sbjct: 3 LKYVASYLLAVTCGNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLD 62
Query: 259 KLSSMPVGGG 288
KL ++P GGG
Sbjct: 63 KLQTLPAGGG 72
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/112 (35%), Positives = 53/112 (47%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAYLL G T P A ++ IL SVGIE + EK+ V++ L GK V++LI G E
Sbjct: 1 MKYLAAYLLLNAAGNT-PDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 259 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL+++P G MGFGLFD
Sbjct: 60 KLAAVPAAG-----PASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 65.7 bits (153), Expect = 6e-10
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1
Query: 88 VAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLS 267
+A Y LAVLG +P + DV+KIL ++ I+AD E+L KVI N K++E LI+ G KL
Sbjct: 1 MATYFLAVLGSNDSPNSKDVKKILGNINIKADEERL-KVIGNFNSKNIEDLISQGSNKLD 59
Query: 268 SMPVG 282
SMP G
Sbjct: 60 SMPNG 64
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 63.7 bits (148), Expect = 2e-09
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 52 RFVSI-RT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKD 228
R SI R MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD
Sbjct: 49 RLASIQRRQTMRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKD 108
Query: 229 VEQLIAAGREKLS 267
+ +++AAG E L+
Sbjct: 109 LAEILAAGSEMLA 121
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 62.9 bits (146), Expect = 4e-09
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVI 207
MRYVAAYLLAVLGG +P + D++KIL SVGIE D E+L KV+
Sbjct: 1 MRYVAAYLLAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/69 (39%), Positives = 46/69 (66%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAYLL+ G P V+KIL + G+E DA +L+ V+T+++ K V++L+ G+
Sbjct: 1 MKYIAAYLLSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKT 60
Query: 259 KLSSMPVGG 285
+++ VGG
Sbjct: 61 EMNK--VGG 67
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 60.5 bits (140), Expect = 2e-08
Identities = 37/112 (33%), Positives = 50/112 (44%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY LA L K TP AADVE I + GIE +++ L V+ + G+ V L+A G
Sbjct: 3 MKYLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAA 61
Query: 259 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
K+S++ V MGFGLFD
Sbjct: 62 KMSAVAV-SAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEEDDDMGFGLFD 112
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+YVAAYL+ VLGG P+ +V+ +L +V + + E L I L GK +LI G +
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 259 KLSSMPVGGG 288
KL + +GGG
Sbjct: 63 KLQN--IGGG 70
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 59.7 bits (138), Expect = 4e-08
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M Y+AAYLLAVL +P ++KILSS+G EA+AE L KVI + N K+ E++I
Sbjct: 1 MHYMAAYLLAVLSSNKSPNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESS 59
Query: 259 KLSSM 273
KL+SM
Sbjct: 60 KLASM 64
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +1
Query: 124 TTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 285
T+ +A D++KIL VG+EA + L KVI+ELNGK++E +IA G +L+S+P GG
Sbjct: 4 TSLSAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 58.8 bits (136), Expect = 7e-08
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AA RE
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA-RE 59
Query: 259 K 261
+
Sbjct: 60 R 60
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 58.8 bits (136), Expect = 7e-08
Identities = 37/111 (33%), Positives = 48/111 (43%)
Frame = +1
Query: 82 RYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREK 261
+Y+AAY LA L K +P+ ADVE I +V I+ D L V+ + G+DV LIA G K
Sbjct: 4 KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62
Query: 262 LSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
+S+MP MGFGLFD
Sbjct: 63 MSAMP--AASSGAAAGVTASAAGDAAPAAAAAKKDEPEEEADDDMGFGLFD 111
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/67 (40%), Positives = 46/67 (68%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY+L +G + A V++IL++ G E D K+K+V +NGK+V ++I AG++
Sbjct: 1 MQYIAAYILCTIGHENAEEAK-VKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKK 59
Query: 259 KLSSMPV 279
++ SM V
Sbjct: 60 QMGSMAV 66
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +1
Query: 76 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 255
KM+YVAAY L L G + P+ ADV+ ++ SV DA KL + + GK++E +I AG
Sbjct: 23 KMKYVAAYALLALNG-SQPSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGL 81
Query: 256 EKLSSMPVGG 285
K+ + +GG
Sbjct: 82 SKVGN--IGG 89
>UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P2-A
- Trypanosoma cruzi
Length = 107
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/112 (28%), Positives = 45/112 (40%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY L L G T P+ + VE +L + G+ D ++ + E GKD + + G+
Sbjct: 1 MKYLAAYALVGLSGGT-PSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKS 59
Query: 259 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 414
KL VGG MGFGLFD
Sbjct: 60 KL----VGGVTRPNAATASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M+Y+AAY+L +G + A V++ILS+ G E D K+K+V +NGK+V ++I R
Sbjct: 1 MQYIAAYILCTIGHEHAEEAK-VKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERN 59
Query: 259 K 261
K
Sbjct: 60 K 60
>UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 124
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 85 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKL 264
YVA Y L +LGG +P DV +L IE + +++ +I L KD+ Q+I G+ K+
Sbjct: 60 YVATYALLLLGGNKSPTMYDVAYVLRQADIEPNLPEIEALIKSLKYKDLNQVIKEGKLKM 119
Query: 265 SSM 273
+
Sbjct: 120 PQL 122
>UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 88
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 204
M Y AAYLLAVLG P + D++KI + G+EAD E LK +
Sbjct: 1 MHYEAAYLLAVLGSNDCPNSKDLKKIQDNFGLEADEEWLKAI 42
>UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29764_29144 - Giardia lamblia
ATCC 50803
Length = 206
Score = 39.9 bits (89), Expect = 0.033
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 251 PAAISCSTSLPLSSVITFLSFSASASI--PTELRIFSTSAAAGVVLPPSTASKYAA 90
P + ST P + + F+ SAS+ PT IFS SA AG LPP A +YAA
Sbjct: 5 PRLMRSSTERPPAPTFSTTVFARSASVVPPTAAIIFSMSATAGSFLPPILARRYAA 60
>UniRef50_Q8SRM2 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P2; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P2 - Encephalitozoon cuniculi
Length = 103
Score = 39.5 bits (88), Expect = 0.043
Identities = 17/67 (25%), Positives = 42/67 (62%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M YVAAY++ GK + E + + +G E + E ++ +++++GK ++++++ G+E
Sbjct: 1 MEYVAAYVMFDKVGKELNERSMTE-LFNEIGAEIEPETMRLFLSKVSGKSMDEVMSKGKE 59
Query: 259 KLSSMPV 279
++S+ +
Sbjct: 60 LMASLAI 66
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 38.3 bits (85), Expect = 0.10
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 106 AVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 285
A G + A DVE L ++ +E +AE +KKVI L GK+ E +GR++ SS+ G
Sbjct: 91 AAYAGTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus
norvegicus|Rep: Isoform 2 of Q8CHJ1 - Rattus norvegicus
(Rat)
Length = 107
Score = 38.3 bits (85), Expect = 0.10
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +1
Query: 46 ITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVIT 210
+ F+S R + ++++ A L G ++P+A D++KIL S+GI+ ++L KV+T
Sbjct: 24 LAEFISERVEVVSPLSSWKRA-LRGNSSPSAKDIKKILDSMGIKVGGDQLNKVVT 77
>UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 87
Score = 35.5 bits (78), Expect = 0.71
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +1
Query: 79 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
M Y AAYLLAVL + + D EK S++ + + K +E LI R
Sbjct: 1 MHYEAAYLLAVLDSNDSLISKDWEKTASAL---RQIKSGSRSSASSAAKTMEDLIVQRRS 57
Query: 259 KLSSMPVG 282
KL+S P+G
Sbjct: 58 KLTSTPMG 65
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 35.5 bits (78), Expect = 0.71
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 94 AYLLAVLGGKTTPAAAD-VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 252
AY +L G TP AD VEK+ G+ + + GKD+ L++ G
Sbjct: 54 AYAALLLAGSNTPLTADNVEKLTKKAGVNVPKQLAAAFVKAFEGKDILSLLSVG 107
>UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1750
Score = 35.1 bits (77), Expect = 0.93
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2
Query: 287 PPPTGIDDSFSRPA----AISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVL 120
P P GID++ S A A+S S S +S S +AS+S P S+SAA+
Sbjct: 329 PTPPGIDETSSSVAASSSAVSSSASSSAASSSAASSSAASSSAPASSSAVSSSAASSSAA 388
Query: 119 PPSTASKYAAT 87
S AS AA+
Sbjct: 389 SSSAASSSAAS 399
>UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 76
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 130 PAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 255
P V KI+ +V IEAD+ + K ++ L GKD +A GR
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKDA---VAGGR 54
>UniRef50_Q24266 Cluster: Transcription factor btd; n=2; Drosophila
melanogaster|Rep: Transcription factor btd - Drosophila
melanogaster (Fruit fly)
Length = 644
Score = 33.1 bits (72), Expect = 3.8
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -2
Query: 257 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 102
S P++ S S S+ S +F S SAS S PT T+AAAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>UniRef50_A3DH59 Cluster: Small GTP-binding protein; n=8;
Bacteria|Rep: Small GTP-binding protein - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 582
Score = 32.7 bits (71), Expect = 5.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 118 GKTT---PAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 285
GKTT P D +++ I + +KLK + LN D E+ + G E S + VGG
Sbjct: 122 GKTTVYGPFGKDDKRMNRLWDIILETDKLKSTVVHLNESDEERAVLVGLETSSKVIVGG 180
>UniRef50_A0NVH7 Cluster: Sensory box/GGDEF domain/EAL domain
protein; n=1; Stappia aggregata IAM 12614|Rep: Sensory
box/GGDEF domain/EAL domain protein - Stappia aggregata
IAM 12614
Length = 387
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 17 LFKTNVILSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLPLTL 148
LF NV+L ++ C L + T PR +WL W A L L L
Sbjct: 6 LFSANVLLLSIFAICFLAIS-LQTRPRTHWLSWAAANALLALAL 48
>UniRef50_UPI0000D9F841 Cluster: PREDICTED: hypothetical protein,
partial; n=3; Deuterostomia|Rep: PREDICTED: hypothetical
protein, partial - Macaca mulatta
Length = 262
Score = 32.3 bits (70), Expect = 6.6
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = -2
Query: 284 PPTGIDDSFSRPAAISCSTSLP--LSSVITFLS-FSASASIPTELRIFST--SAAAGVVL 120
PP+ + + S P+A+S + S P LSS + S S++AS P+ L ++ SA +
Sbjct: 174 PPSALSSTASPPSALSSTASPPSALSSTASPPSALSSTASPPSALSSTASPPSALSSTAS 233
Query: 119 PPSTASKYAA 90
PPST S A+
Sbjct: 234 PPSTLSSTAS 243
>UniRef50_Q2CHG3 Cluster: Putative uncharacterized protein; n=1;
Oceanicola granulosus HTCC2516|Rep: Putative
uncharacterized protein - Oceanicola granulosus HTCC2516
Length = 479
Score = 32.3 bits (70), Expect = 6.6
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -2
Query: 287 PPPTGIDDSFSRPAAIS--CSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPP 114
PPP + + ++P+A++ S + P+ +T + A S+ T R+ +T+AAA + PP
Sbjct: 61 PPPAALPSASAQPSALARAASATAPVDDTVTPSATEAVMSLST--RLSATAAAAEIPPPP 118
>UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium
johnsoniae UW101|Rep: Peptidase S41 - Flavobacterium
johnsoniae UW101
Length = 547
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 118 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 258
GK + +IL EAD K+ VIT++NGK +++LI R+
Sbjct: 242 GKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRD 288
>UniRef50_Q6K5K0 Cluster: Myosin-like protein; n=5; Oryza
sativa|Rep: Myosin-like protein - Oryza sativa subsp.
japonica (Rice)
Length = 421
Score = 32.3 bits (70), Expect = 6.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 175 EADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 276
++D EKLK + E N D E L AG+ +SS+P
Sbjct: 291 KSDIEKLKHALDEKNISDAEDLGPAGKASISSVP 324
>UniRef50_A2QA67 Cluster: Contig An01c0330, complete genome; n=1;
Aspergillus niger|Rep: Contig An01c0330, complete genome
- Aspergillus niger
Length = 759
Score = 32.3 bits (70), Expect = 6.6
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 287 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPT-ELRIFSTSAAAGVVLPPS 111
P G++ F+ PAA S STS SSV +++S SA IPT ++R + V PS
Sbjct: 113 PANVGVNSRFAHPAAGSVSTSSSNSSVHSYMSKDDSA-IPTRQIRTDAPLRPLSTVNLPS 171
Query: 110 TAS 102
+S
Sbjct: 172 PSS 174
>UniRef50_Q5DAP6 Cluster: SJCHGC05592 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC05592 protein - Schistosoma
japonicum (Blood fluke)
Length = 502
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -2
Query: 242 ISCSTSLPLSSVIT--FLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 87
I+ S S PL+S +T FLS S+ +S+ T++ + ST ++L T AAT
Sbjct: 329 IAFSFSTPLASFVTYFFLSVSSKSSVETDIGMASTRTGFALLLSGGTFLYVAAT 382
>UniRef50_Q18749 Cluster: Putative uncharacterized protein ehbp-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein ehbp-1 - Caenorhabditis elegans
Length = 901
Score = 31.9 bits (69), Expect = 8.7
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 124 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 243
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,743,262
Number of Sequences: 1657284
Number of extensions: 5531209
Number of successful extensions: 18455
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 17729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18408
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -