Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o05f
         (497 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808...    29   2.1  
01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38...    28   3.6  
01_06_0772 - 31864564-31864653,31864733-31864816,31865547-318656...    28   4.8  
01_05_0090 + 18038219-18038421,18039365-18039488,18040229-180403...    28   4.8  
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879...    27   6.3  

>01_06_0554 +
           30179641-30179658,30179725-30180126,30180580-30180892,
           30180966-30181358,30181442-30182427
          Length = 703

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 190 LCDEVAKIQESILIVKDERKFLLHKLLEYEN 282
           L DE+  +Q+S+ + KDE + L H++ E+E+
Sbjct: 605 LQDEITGLQQSLEMKKDEMQKLAHQVAEHES 635


>01_01_0050 -
           382451-382864,382950-383020,383131-383176,383302-383333,
           383409-383558,383666-383849,383934-384109,384580-384628,
           384724-384923,385515-385548
          Length = 451

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 172 ILENAALCDEVAKIQESILIVKDERKFLLHKLLE-YENDTESIHS 303
           I ++A+   ++AK  + +L  KDE K +L KL + +++  E+  S
Sbjct: 191 IQDSASAFSDIAKTNQELLASKDEDKKILTKLAQAFDSQAEAFRS 235


>01_06_0772 -
           31864564-31864653,31864733-31864816,31865547-31865603,
           31865700-31865828,31866704-31866790,31866856-31866933,
           31867150-31867306,31868000-31868141,31868835-31868986,
           31869118-31869371,31869819-31869896
          Length = 435

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -2

Query: 424 IDNYIKYILYINNFIYLLKFVFFSL*I*VHLN*LKYHFYN*NEYFQYHFHILVVYVVKTF 245
           +   IKY ++I  F+Y+  FV+F L +       KY F    +Y   H  +L V+   +F
Sbjct: 144 VSGLIKYQMFICYFLYIAGFVWFILTL--KKKTYKYQF---KQYAWTHMILLTVFAQSSF 198

Query: 244 S 242
           +
Sbjct: 199 T 199


>01_05_0090 +
           18038219-18038421,18039365-18039488,18040229-18040311,
           18040401-18040473,18040584-18040688,18040803-18040853,
           18041705-18041781,18041879-18042037,18043548-18043692,
           18043776-18043884,18043959-18044107,18044175-18044258,
           18044784-18044825,18045811-18046014
          Length = 535

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 262 KLLEYENDTESIHSSYRSDTLVNLNG 339
           K+LE  ND     + YR   L+ LNG
Sbjct: 409 KILEKRNDLRQFETEYRKRALIELNG 434


>02_04_0481 +
           23284296-23284448,23284553-23284753,23284855-23287971,
           23288510-23289353,23289468-23290120,23290573-23290676,
           23290898-23291000
          Length = 1724

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 190 LCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDTLVNLNGPKSK 351
           L + + + +E    ++DE   +LHKL  +E+   S+H      T+  L   + K
Sbjct: 530 LLNSLYQAKEDAARMQDESSAMLHKLASHESKLNSMHEEVDRLTIALLEEKQEK 583


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,213,926
Number of Sequences: 37544
Number of extensions: 134645
Number of successful extensions: 264
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)