Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o05f
(497 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023540-1|AAY84940.1| 269|Drosophila melanogaster IP09871p pro... 38 0.008
AE014297-3701|AAN14036.1| 269|Drosophila melanogaster CG31111-P... 38 0.008
AE013599-1195|AAF58734.1| 297|Drosophila melanogaster CG18004-P... 29 2.6
AE013599-1194|AAM68756.2| 291|Drosophila melanogaster CG18004-P... 29 2.6
AE014297-2198|AAF55307.1| 202|Drosophila melanogaster CG10317-P... 29 3.5
AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p pro... 28 6.1
AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid horm... 28 6.1
AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator tra... 28 6.1
AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA... 28 6.1
BT023596-1|AAY84996.1| 168|Drosophila melanogaster IP09307p pro... 28 8.1
BT023585-1|AAY84985.1| 215|Drosophila melanogaster IP09407p pro... 28 8.1
>BT023540-1|AAY84940.1| 269|Drosophila melanogaster IP09871p
protein.
Length = 269
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +1
Query: 166 SLILENAALCDEVAKIQESILIVKDERKFLLHKLLEYE 279
S +LENAAL DE+ ++Q + + + +R +L+ +L+ +E
Sbjct: 18 SYLLENAALTDEICRLQAELSVTRSQRLYLIERLMFHE 55
>AE014297-3701|AAN14036.1| 269|Drosophila melanogaster CG31111-PA
protein.
Length = 269
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +1
Query: 166 SLILENAALCDEVAKIQESILIVKDERKFLLHKLLEYE 279
S +LENAAL DE+ ++Q + + + +R +L+ +L+ +E
Sbjct: 18 SYLLENAALTDEICRLQAELSVTRSQRLYLIERLMFHE 55
>AE013599-1195|AAF58734.1| 297|Drosophila melanogaster CG18004-PA,
isoform A protein.
Length = 297
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 169 LILENAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDT 321
LI EN D + Q +L V +R FLL +LL YE + S +D+
Sbjct: 76 LIYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKPAKDSSDSDATDS 126
>AE013599-1194|AAM68756.2| 291|Drosophila melanogaster CG18004-PB,
isoform B protein.
Length = 291
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 169 LILENAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDT 321
LI EN D + Q +L V +R FLL +LL YE + S +D+
Sbjct: 70 LIYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKPAKDSSDSDATDS 120
>AE014297-2198|AAF55307.1| 202|Drosophila melanogaster CG10317-PA
protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 181 NAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDTLVNLNGPKSKV 354
N ++ D+ K ESIL V E E +D ++ SY+S T + S++
Sbjct: 99 NMSMSDDKEKENESILRVNKESAVFQSANTELPSDPNTVERSYQSKTTIRHTNKDSEI 156
>AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p
protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 EVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSY 309
E+ + + I I KD+R +L LLE +DT+ I Y
Sbjct: 95 EICVLSDVISIAKDKRYLVLDPLLEEADDTKPIVQVY 131
>AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP80 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 EVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSY 309
E+ + + I I KD+R +L LLE +DT+ I Y
Sbjct: 95 EICVLSDVISIAKDKRYLVLDPLLEEADDTKPIVQVY 131
>AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator
transcriptional cofactorTRAP80 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 EVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSY 309
E+ + + I I KD+R +L LLE +DT+ I Y
Sbjct: 95 EICVLSDVISIAKDKRYLVLDPLLEEADDTKPIVQVY 131
>AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA
protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 199 EVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSY 309
E+ + + I I KD+R +L LLE +DT+ I Y
Sbjct: 95 EICVLSDVISIAKDKRYLVLDPLLEEADDTKPIVQVY 131
>BT023596-1|AAY84996.1| 168|Drosophila melanogaster IP09307p
protein.
Length = 168
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 181 NAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDTLV 327
N ++ D+ K ESIL V E E +D ++ SY+S T +
Sbjct: 52 NMSMSDDKEKENESILRVNKESAVFQSANTELPSDPNTVERSYQSKTTI 100
>BT023585-1|AAY84985.1| 215|Drosophila melanogaster IP09407p
protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 181 NAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDTLV 327
N ++ D+ K ESIL V E E +D ++ SY+S T +
Sbjct: 99 NMSMSDDKEKENESILRVNKESAVFQSANTELPSDPNTVERSYQSKTTI 147
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,642,274
Number of Sequences: 53049
Number of extensions: 261845
Number of successful extensions: 766
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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