Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o03r
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 113 1e-25
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 88 6e-18
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 66 2e-11
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 5e-07
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 0.57
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 5.1
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0) 28 6.7
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 113 bits (272), Expect = 1e-25
Identities = 81/224 (36%), Positives = 114/224 (50%), Gaps = 27/224 (12%)
Frame = -2
Query: 713 VVIIHXHSG-TATTTINPIV-------KDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVT 558
V+IIH +G T T+I V K+ L GD+NVI+VDW + ++ AV
Sbjct: 108 VIIIHGFAGFTTLTSIRHEVNWWGFPMKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTR 167
Query: 557 GVGSSIATFLKNLK----LPLNKVHIVGFNLGAHVAGVTGRNLEGK---VARITGLDPSA 399
VG+ A L+ L+ L VH++GF+ GAHVAG GR ++ + + RIT LDP+A
Sbjct: 168 LVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAA 227
Query: 398 RDW---ENNVLRLGTNDAQYVEVIHTDGSGVNKNGLGVAIGHIDFFVNGRLVQPGCTN-- 234
W + +RL T+DA +V+VIHT G+ IGH DF+ NG QPGC N
Sbjct: 228 M-WFHKHHEDVRLDTSDALFVDVIHTSAD----YGITSTIGHADFYPNGGKKQPGCDNFF 282
Query: 233 ------NLCSHNRAYEVFAATI-THGKHYGNQCSTEAEITANNC 123
C H RA +F ++ T Y C +E + + NC
Sbjct: 283 RGFSSYLFCGHKRAPALFTTSLYTKTPLYSYPCRSEDDFNSGNC 326
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 97.5 bits (232), Expect = 1e-20
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 17/176 (9%)
Frame = -2
Query: 659 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HI 492
++ A + D NVI DWS + Y A VG+ I +K L ++
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 491 VGFNLGAHVAGVTGRNLEG---KVARITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTD 327
VGF+LGAH++G GR + K+ RITGLDP++ + N +V +RL +DA +V+V+HTD
Sbjct: 692 VGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD 751
Query: 326 GSGVNKNGLGVAIGHIDFFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 183
++ G GHIDF+ NG QPGC + L C H RA E +A ++T
Sbjct: 752 ---MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 88.2 bits (209), Expect = 6e-18
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Frame = -2
Query: 659 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VH 495
+KD L D NVI+VDW + Y AV VG+ +A F+K L L ++ H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 494 IVGFNLGAHVAGVTGRNLE--GK-VARITGLDPSARDWENNV--LRLGTNDAQYVEVIHT 330
+GF+LGAH++G G+ L+ G+ + RITGLDP+ ++ +RL DAQ+V+VIHT
Sbjct: 175 SIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHT 234
Query: 329 DGSGVNKNGLGVAIGHIDFFVNGRLVQPGCT 237
G+ GH+DF+ NG Q GC+
Sbjct: 235 S----YVFGITAPHGHMDFYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -2
Query: 716 IVVIIHXHSGTATTTINPIVKDAFLTSGDYNVIVVDWSSFS--LSTYSTAVMAVTGVGSS 543
+V+IIH + + +++D L NVI VDW S + L+ Y A VG+
Sbjct: 25 LVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQ 84
Query: 542 IATFLKNLK----LPLNKVHIVGFNLGAHVAGVTGRNLEGKVARIT 417
+A + ++ L +VH++G +LGAHVAG G L GKV RIT
Sbjct: 85 LAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = -2
Query: 413 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGVAIGHIDFFVNGRLVQPGC 240
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 239 -------TNNL-CSHNRAYEVFAATIT 183
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 29.5 bits (63), Expect(2) = 0.57
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 244 PGWTRRPLTKKSMC-PIATPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRAEGSRP 417
P +P+ +C P+ +P P +++P P I + + VP+ TL QS A P
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPASILNP 251
Score = 21.0 bits (42), Expect(2) = 0.57
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 538 AILDPTPVTAITAVEYVDKLN 600
++ P P++A Y++KLN
Sbjct: 257 SVTSPAPLSAAEEQAYLEKLN 277
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = -2
Query: 494 IVGFNLGAHVAGVTG---RNLEG-KVARITG 414
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -2
Query: 377 LRLGTNDAQYVEVIHTDGSGVNKNGLGVAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 204
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 203 VFAATITHGKHYGNQCSTEAEITANN-CRG 117
AT+T G Y EAE T CRG
Sbjct: 61 EAEATVTEGVQY-----VEAEATVTEVCRG 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 542 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 402
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 278 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 144
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 659 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAV 570
+K+ L GD+NVI+VDW + ++ AV
Sbjct: 19 MKNELLWEGDFNVIIVDWMRGAWFPFTRAV 48
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 311 KNGLGVAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 210
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 533 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 402
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 710 VIIHXHSGTATTTINPIVKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGS 546
VI H ++ + +T+ ++ A L D NV++ DW + Y A VG+
Sbjct: 106 VIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVGA 160
>SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 2497
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -2
Query: 686 TATTTINPIVKDAFLTSGDYNVIV---VDWSSFSLSTYSTAVMAVTGVGSSIATFLKN 522
T TTT N ++K A L +GDY V + VD+ + +YS + VT + FL+N
Sbjct: 64 TITTTKNALIKAASLKAGDYFVRLSASVDYVQ-GMVSYSYGFVRVTAAKPRV-KFLRN 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,837,614
Number of Sequences: 59808
Number of extensions: 488286
Number of successful extensions: 1139
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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