Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o01r
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa su... 81 1e-15
BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase comple... 79 5e-15
U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein p... 33 0.45
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 33 0.45
U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein p... 33 0.45
BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting p... 33 0.45
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 33 0.45
BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting p... 33 0.45
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 33 0.45
AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive p... 33 0.45
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 33 0.45
BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog, s... 29 5.6
AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string pr... 29 5.6
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 28 9.7
AK074718-1|BAC11159.1| 458|Homo sapiens protein ( Homo sapiens ... 28 9.7
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 28 9.7
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 28 9.7
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 28 9.7
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 28 9.7
>L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa
subunit protein.
Length = 102
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/76 (42%), Positives = 50/76 (65%)
Frame = -1
Query: 313 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXXXX 134
++ +S+PT +DY GQ AE++++ I +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 133 LTVPPWPMYRRNPLNW 86
LT+PPWP+YRR+PL W
Sbjct: 62 LTLPPWPIYRRHPLKW 77
>BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase complex
subunit 1 homolog (S. cerevisiae) protein.
Length = 104
Score = 79.0 bits (186), Expect = 5e-15
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = -1
Query: 313 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXX-- 140
++ +S+PT +DY GQ AE++++ II +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 139 XXLTVPPWPMYRRNPLNW 86
LT+PPWP+YRR+PL W
Sbjct: 62 AQLTLPPWPIYRRHPLKW 79
>U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein
protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 383 QLNG 394
+++G
Sbjct: 303 EIDG 306
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 250
Query: 383 QLNG 394
+++G
Sbjct: 251 EIDG 254
>U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein
protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 215 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 271
Query: 383 QLNG 394
+++G
Sbjct: 272 EIDG 275
>BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 383 QLNG 394
+++G
Sbjct: 303 EIDG 306
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 250
Query: 383 QLNG 394
+++G
Sbjct: 251 EIDG 254
>BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 383 QLNG 394
+++G
Sbjct: 303 EIDG 306
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 190 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 246
Query: 383 QLNG 394
+++G
Sbjct: 247 EIDG 250
>AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 383 QLNG 394
+++G
Sbjct: 303 EIDG 306
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 382
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 181 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 237
Query: 383 QLNG 394
+++G
Sbjct: 238 EIDG 241
>BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 5 beta protein.
Length = 199
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 239 NNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYC 126
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
>AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string
protein protein.
Length = 199
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 239 NNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYC 126
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 413 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 472
>AK074718-1|BAC11159.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ90237 fis, clone NT2RM2000622. ).
Length = 458
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 244 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 303
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 439 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 498
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 490 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 549
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 1122 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 1181
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 278 LRRTSKSREIIQGNNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYCSSMANVPTQ 99
+RR S ++ N Q SW L L +S SW +SA C S C + + Q
Sbjct: 646 IRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQ 705
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,935,334
Number of Sequences: 237096
Number of extensions: 934983
Number of successful extensions: 2016
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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