Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o01f
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa su... 81 1e-15
BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase comple... 79 7e-15
U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein p... 33 0.59
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 33 0.59
U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein p... 33 0.59
BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting p... 33 0.59
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 33 0.59
BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting p... 33 0.59
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 33 0.59
AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive p... 33 0.59
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 33 0.59
BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog, s... 29 7.2
AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string pr... 29 7.2
>L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa
subunit protein.
Length = 102
Score = 81.4 bits (192), Expect = 1e-15
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +1
Query: 85 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXXXX 264
++ +S+PT +DY GQ AE++++ I +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 265 XTVPPWPMYRRNPLNW 312
T+PPWP+YRR+PL W
Sbjct: 62 LTLPPWPIYRRHPLKW 77
>BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase complex
subunit 1 homolog (S. cerevisiae) protein.
Length = 104
Score = 79.0 bits (186), Expect = 7e-15
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +1
Query: 85 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXX-- 258
++ +S+PT +DY GQ AE++++ II +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 259 XXXTVPPWPMYRRNPLNW 312
T+PPWP+YRR+PL W
Sbjct: 62 AQLTLPPWPIYRRHPLKW 79
>U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein
protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 15 QLNG 4
+++G
Sbjct: 303 EIDG 306
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 250
Query: 15 QLNG 4
+++G
Sbjct: 251 EIDG 254
>U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein
protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 215 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 271
Query: 15 QLNG 4
+++G
Sbjct: 272 EIDG 275
>BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 15 QLNG 4
+++G
Sbjct: 303 EIDG 306
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 250
Query: 15 QLNG 4
+++G
Sbjct: 251 EIDG 254
>BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 15 QLNG 4
+++G
Sbjct: 303 EIDG 306
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 190 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 246
Query: 15 QLNG 4
+++G
Sbjct: 247 EIDG 250
>AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive
protein, 60kDa protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 302
Query: 15 QLNG 4
+++G
Sbjct: 303 EIDG 306
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 32.7 bits (71), Expect = 0.59
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 192 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILKKLIRSN 16
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K I
Sbjct: 181 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFF 237
Query: 15 QLNG 4
+++G
Sbjct: 238 EIDG 241
>BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 5 beta protein.
Length = 199
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 159 NNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYC 272
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
>AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string
protein protein.
Length = 199
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 159 NNYIVQYSWFCMGLYSSAILAVSVYSWCWISACCHSYC 272
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,170,851
Number of Sequences: 237096
Number of extensions: 1019812
Number of successful extensions: 2147
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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