Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n24r
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.4  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 100 EQTPTRTRLWRRGPPESPWHWSRPPTSKT 186
           ++T   TRLW R    +   WS P    T
Sbjct: 560 DETSLDTRLWPRAAAFAERVWSDPQLDVT 588


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 173 GGRDQCQGDSGG 138
           GGRD  +GD GG
Sbjct: 97  GGRDGDRGDGGG 108


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 357 PPQDCHH*FQFHVYNKAAIP 416
           PP   HH  ++H Y    +P
Sbjct: 166 PPVYTHHYARYHPYPNFGVP 185


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 107 VCSWGQYCAD 78
           VC WG+Y  D
Sbjct: 521 VCMWGEYVDD 530


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 154  WHWSRPPTSKTP 189
            WH   PPTS+ P
Sbjct: 1374 WHPPIPPTSEKP 1385


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 402 KAAIPGYWL 428
           KA  PGYWL
Sbjct: 593 KATNPGYWL 601


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 213 STVNGSVTLDAGILIDGPDLDV 278
           S +  ++++D GIL + PD+ +
Sbjct: 471 SQLKNALSIDKGILREKPDVKI 492


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 310 YSEGLIRSNSVTSRSGPSIRMPASNVTDP 224
           +S G + S   ++ SG   + PA+ V DP
Sbjct: 56  FSFGQVNSPPSSTSSGSLGQFPATPVIDP 84


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 12/48 (25%), Positives = 19/48 (39%)
 Frame = +2

Query: 149 HPGTGRDHRRPKHQSTTC*R**HG*WVCNVGRRHSD*WSRPGRDGVAP 292
           +P TG    +P+    T  +   G W C+      + W R  R  + P
Sbjct: 683 NPSTGSKPGKPRSAFLTDLKLMGGKWSCDCDLGWVEVWERKRRQYLCP 730


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,840
Number of Sequences: 336
Number of extensions: 3234
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)