Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n24r
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 68 4e-12
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 57 1e-08
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 48 3e-06
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 30 1.3
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 2.2
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 2.2
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 2.9
Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 3.9
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 28 5.1
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 5.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 28 5.1
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 27 6.7
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 27 6.7
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 27 6.7
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 27 8.9
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 27 8.9
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 27 8.9
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 27 8.9
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 27 8.9
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 27 8.9
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 68.1 bits (159), Expect = 4e-12
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = -2
Query: 308 LGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCSGVLDVGGRDQCQGDSGGPLL 129
+G +E+L+ + IN+ CV + I +++ + C+G L+ GG D CQGDSGGP
Sbjct: 160 MGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCAGYLE-GGIDSCQGDSGGPFA 217
Query: 128 HNR-----VLVGVCSWGQYCADRRFPGVNVRVSRFTSWIQS 21
R VL GV SWG CA ++ PG+ V+ + SWI +
Sbjct: 218 CRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISA 258
Score = 31.1 bits (67), Expect = 0.55
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 457 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 314
R++GG T +P AAL N CG +IL++ +++AAHC
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHC 70
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 56.8 bits (131), Expect = 1e-08
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = -2
Query: 314 SILGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANMLCSGVLDVGGRDQCQGDSGG 138
+I G S ++ LR + V ++ C I R +MLC+G G D CQGDSGG
Sbjct: 185 TIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY-SYGKIDSCQGDSGG 243
Query: 137 PLLHNR----VLVGVCSWGQYCADRRFPGVNVRVSRFTSWI 27
PL+ R L GV SWG CA PGV V ++WI
Sbjct: 244 PLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
Score = 34.3 bits (75), Expect = 0.059
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = -3
Query: 469 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 314
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHC 100
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Frame = -2
Query: 296 NSEQLRHVQVWTINQNACVQRYRPINRA---ITANMLCSGVLDVGGRDQCQGDSGGPLLH 126
NS+ L+ V I+ + CV+ +R ++ IT +C+G G GDSGGPLL
Sbjct: 179 NSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHG---TAPGDSGGPLLI 235
Query: 125 NR-----VLVGVCSWGQYCADR-----RFPGVNVRVSRFTSWIQ 24
++ V +G+ S+G D +FPGV R+S++ WIQ
Sbjct: 236 HKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQ 279
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 64 PGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEHNMLAVIA 216
P K+R+ + P++ P + + R + PW S P + P + V A
Sbjct: 109 PEKKRAVEPTPKQAAPIKEKSKSRESKKEPWKTSTAPAATAPVTETVTVAA 159
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 37 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 195
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1493 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1542
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 37 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 195
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1669 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1718
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 32 KR*NGKRER*HQGSDGQRSTVPKSR-HQRGRGCGGEDHRSHPGTGRDHRRPK 184
KR + +G+D +RST H+ R HR H G R+HR K
Sbjct: 259 KRKRSRSRSTDRGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHK 310
>Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical
protein T19B10.6 protein.
Length = 368
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 385 WNQWWQSCGGNILNQRSILSAAHCPYSEGLIRSNSVTSRSGPSIRMPASNVTDPLTVL 212
W+Q QSCGGN L + +G R+N GP+++ +T P L
Sbjct: 176 WSQHQQSCGGNFL---KVKEPEGYGQGKGSKRTNDKNKSGGPALK---KTITPPRVTL 227
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 56 R*HQGSDGQRSTVPKSRHQRGRGCGGEDHRS-HPGTGRDHRRPKH 187
R H G G RS P RH G G GG RS PG H H
Sbjct: 236 RGHGGRHGSRSGSPGGRHGHG-GHGGHGSRSGSPGGRHGHGGSGH 279
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 64 PGKRRSAQYCPQEQT-PTRTRLWRRG 138
P K +SAQ CP QT P +T + R G
Sbjct: 53 PAKEKSAQTCPTAQTPPAKTPMERSG 78
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 430 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 314
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 40 KRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPES 150
+R +RT + +RRS +TP R RR PP S
Sbjct: 99 RRRSRTRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRS 135
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 370 QSCGGNILNQRSILSAAHCPYSEGLIRSNSVTSRSGPSIRMPASNVTDPLTV 215
Q+CGG+ + + + L A H +E + V SG + M + DPL V
Sbjct: 455 QNCGGSTIRKMTELRAIHAQNAENW--TFGVDGTSGDLVDMNKLEIWDPLAV 504
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 61 TPGKRRSAQ----YCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTP 189
T G + SAQ Y +Q P + + + PP+ P +++PP + P
Sbjct: 40 TQGYQDSAQVPQGYPQSQQAPQAPQGYPQQPPQDPTQYAQPPQQQQP 86
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 104 RHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
R+ RG GE HR G HR H+ T
Sbjct: 4 RYYRGESHRGETHRGETHRGETHRGETHRGKT 35
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 62 HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
H+G + R + RG+ GE HR G HR H+ T
Sbjct: 16 HRG-ETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGET 60
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 62 HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
H+G + R + + RG GE HR G HR H+ T
Sbjct: 21 HRG-ETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKT 65
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 62 HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
H+G + T H RG GE HR G+ HR H+ T
Sbjct: 31 HRGKTHRGETHRGETH-RGETHRGETHRGETHRGKTHRGETHRGET 75
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 29 SKR*NGKRER*HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
++R +R H+G + R + RG GE HR G HR H+ T
Sbjct: 39 TRRGETRRGETHRG-ETHRGETHRGETHRGETHRGETHRGETYRGETHRGETHRGET 94
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 62 HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 199
H+G + +R + RG GE HR G HR H+ T
Sbjct: 35 HRG-ETRRGETRRGETHRGETHRGETHRGETHRGETHRGETHRGET 79
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -2
Query: 218 RAITANMLCSGVLDVGGRDQCQGDSGGPLLHNRVLVGVCS---WGQYCADRRFPGVNVRV 48
R + AN L DV G Q P+ N + C+ G YC + G+ +R
Sbjct: 232 RILQANCLMIESHDVTGHRMPQEYKSDPVQANVSVFDACNVAFMGSYCTEGEGIGIVIRT 291
Query: 47 SRFT 36
+FT
Sbjct: 292 GKFT 295
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -2
Query: 218 RAITANMLCSGVLDVGGRDQCQGDSGGPLLHNRVLVGVCS---WGQYCADRRFPGVNVRV 48
R + AN L DV G Q P+ N + C+ G YC + G+ +R
Sbjct: 232 RILQANCLMIESHDVTGHRMPQEYKSDPVQANVSVFDACNVAFMGSYCTEGEGIGIVIRT 291
Query: 47 SRFT 36
+FT
Sbjct: 292 GKFT 295
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -2
Query: 218 RAITANMLCSGVLDVGGRDQCQGDSGGPLLHNRVLVGVCS---WGQYCADRRFPGVNVRV 48
R + AN L DV G Q P+ N + C+ G YC + G+ +R
Sbjct: 232 RILQANCLMIESHDVTGHRMPQEYKSDPVQANVSVFDACNVAFMGSYCTEGEGIGIVIRT 291
Query: 47 SRFT 36
+FT
Sbjct: 292 GKFT 295
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -2
Query: 218 RAITANMLCSGVLDVGGRDQCQGDSGGPLLHNRVLVGVCS---WGQYCADRRFPGVNVRV 48
R + AN L DV G Q P+ N + C+ G YC + G+ +R
Sbjct: 232 RILQANCLMIESHDVTGHRMPQEYKSDPVQANVSVFDACNVAFMGSYCTEGEGIGIVIRT 291
Query: 47 SRFT 36
+FT
Sbjct: 292 GKFT 295
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 476 CSYQPTKDYWWLHD 435
CS P+K WW HD
Sbjct: 136 CSKNPSKTRWWFHD 149
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 364 CGGNILNQRSILSAAHC 314
CGG ++ + +L+AAHC
Sbjct: 62 CGGTLITLKHVLTAAHC 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,497,452
Number of Sequences: 27780
Number of extensions: 301085
Number of successful extensions: 951
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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