Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n23r
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   7.4  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 396 LKFNKWNRYLYFNHYTCNYS 455
           L F+  NR+  F H+ CN+S
Sbjct: 837 LIFSPTNRFRIFCHWLCNHS 856


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 304 LTYLCILKKVIKYDIYEVLLTVC 236
           +T LC + KV +  IY+ LL  C
Sbjct: 620 ITSLCAIAKVFELVIYKNLLHAC 642


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 476 CVALLHLGVITCVVIKV 426
           CV   H+ V+TCV++ V
Sbjct: 837 CVDRTHMIVLTCVIVSV 853


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 154 DFILFF*TLVAKCRYRNVKSQFLQY*PATSGPVRVTMFNRAMDI 23
           D I  F  LVA+ R RNV+       P  +   R TM  R + +
Sbjct: 288 DLIHDFNQLVARFRERNVEPIMTTLTPIANSGGRTTMAERLLKL 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,260
Number of Sequences: 2352
Number of extensions: 13249
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)