Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n20f
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01290.1 68415.m00043 expressed protein 119 1e-27
At1g71100.1 68414.m08205 ribose 5-phosphate isomerase-related si... 118 3e-27
At3g04790.1 68416.m00516 ribose 5-phosphate isomerase-related si... 105 2e-23
At5g20790.1 68418.m02470 expressed protein predicted protein, Ar... 31 0.85
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 31 0.85
At1g50900.1 68414.m05723 expressed protein 30 1.1
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 29 3.4
At1g26110.1 68414.m03186 expressed protein 28 4.5
At2g41750.1 68415.m05161 DTW domain-containing protein contains ... 28 6.0
At5g66220.1 68418.m08342 chalcone-flavanone isomerase, putative ... 27 7.9
>At2g01290.1 68415.m00043 expressed protein
Length = 265
Score = 119 bits (287), Expect = 1e-27
Identities = 62/160 (38%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Frame = +1
Query: 151 LKMSLEQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTS 327
+ ++ ++ K++AAY+AV+ FV + + G+G+GST +AV R+ E + KL+ + IPTS
Sbjct: 29 MNLTQDELKRIAAYKAVE-FVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTS 87
Query: 328 FQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKL 507
+ ++ + G+ L +L+ +P ID++IDGADEVD + L+KG GG LL+EK+I SKK
Sbjct: 88 KKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKF 147
Query: 508 IVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISL 627
+VI D +K +G K +P+E++P + K+ SL
Sbjct: 148 VVIVDDSKMVKHIGGS-KLALPVEIVPFCWKFTAEKLRSL 186
>At1g71100.1 68414.m08205 ribose 5-phosphate isomerase-related
similar to ribose-5-phosphate isomerase GI:18654317 from
[Spinacia oleracea]
Length = 267
Score = 118 bits (284), Expect = 3e-27
Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Frame = +1
Query: 157 MSLEQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTSFQ 333
++ E+ K++AAY+AV+ FV + + G+G+GST +AV R++E + KLK + IPTS
Sbjct: 27 LTQEELKKIAAYKAVE-FVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTT 85
Query: 334 AKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIV 513
+ + G+ L +L+++P +D++IDGADEVD + L+KG GG LL+EK+I SKK +V
Sbjct: 86 THEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVV 145
Query: 514 IADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLY 630
I D +K VK VP+EV+P + K+ L+
Sbjct: 146 IVDESK-LVKYIGGSGLAVPVEVVPFCCDFTRGKLEELF 183
>At3g04790.1 68416.m00516 ribose 5-phosphate isomerase-related
similar to ribose-5-phosphate isomerase GI:18654317 from
[Spinacia oleracea]
Length = 276
Score = 105 bits (253), Expect = 2e-23
Identities = 59/165 (35%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Frame = +1
Query: 106 ASKLISRHFFIQSTTLKMSLEQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAER 285
+S S F +++ ++ +S + K++AA +AV+ + + G+G+GST +AV ++ +
Sbjct: 26 SSPRTSVSFSVKAQSVALSQDDLKKLAAEKAVEA-IKPGMVLGLGTGSTAAFAVDQIGKL 84
Query: 286 VESEKL-KVTCIPTSFQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGG 462
+ S +L + IPTS + ++ G+ L L+T+P ID+ IDGADEVD N+ L+KG GG
Sbjct: 85 LSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGG 144
Query: 463 CLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAY 597
LL+EK++ + + K IV+AD TK LG +P+EV+ +
Sbjct: 145 ALLREKMVEAVADKFIVVADDTKLVTGLGGS-GLAMPVEVVQFCW 188
>At5g20790.1 68418.m02470 expressed protein predicted protein,
Arabidopsis thaliana
Length = 193
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 322 TSFQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGG 462
T + + LI G+ G+L +DV +DG V+ ++T + GGG
Sbjct: 93 TVTKTEPLICDDGVTKGKLTMCYEVDVDVDGGRCVNGDLTAVSYGGG 139
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 30.7 bits (66), Expect = 0.85
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -1
Query: 452 PLISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDST-RSA 276
PL S S SAP+ +TS+ + SP SP L I FA + S + S S+
Sbjct: 139 PLHSSSPFSFGSAPAAITSVSSGPAQSPASSPRLWIDRFATSSSASATSSSSTSSPFHSS 198
Query: 275 SL---CTA*TTVDPLPTP 231
SL A T+V PTP
Sbjct: 199 SLLGFAPAVTSVSSAPTP 216
>At1g50900.1 68414.m05723 expressed protein
Length = 175
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 428 STSSAPSIVTSIFGFVSSSPRL 363
S S APS+ TS+F SSSPRL
Sbjct: 7 SFSCAPSLATSLFSTTSSSPRL 28
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 244 GSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELETNPNIDVT 405
GST + AVQ L +V ++ VT P A ++ G+ G++ +DVT
Sbjct: 413 GSTRIPAVQELVRKVTGKEPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVT 466
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 461 PPPPLISVMFESTSSAPSIVTSIFGFVSSSPRLSP 357
PPPP S + SS P +S+F F +SS L+P
Sbjct: 217 PPPPTGSSSLQG-SSLPEAPSSLFPFSTSSQMLAP 250
>At2g41750.1 68415.m05161 DTW domain-containing protein contains
Pfam domain, PF03942: DTW domain
Length = 253
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 566 PFLYLSPSFTESFV*SAITISFFEQDAIIFSCNRHPPPPLISVMFEST 423
P +YL PS S A+TIS F+ ++ PPPL ++F++T
Sbjct: 91 PTIYLFPSSPSS---PAVTISEFKSLNLLNHREISNPPPLRLIVFDAT 135
>At5g66220.1 68418.m08342 chalcone-flavanone isomerase, putative /
chalcone isomerase, putative (CHI) similar to SP|P41088
Length = 223
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 358 GLNLGEL-ETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKD 534
G N EL E+ P + G E + +T+ K G EK++ +C + + YT+
Sbjct: 61 GKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRS 120
Query: 535 SVKLGDRY 558
K D++
Sbjct: 121 EAKAIDQF 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,033,646
Number of Sequences: 28952
Number of extensions: 237016
Number of successful extensions: 693
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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