Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n17f
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   2.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 218 TVSFVPLLSTVMVLYLSPSLINVV 147
           TV  +P++   +VLY +  L NVV
Sbjct: 136 TVYLLPIIINPLVLYEARKLANVV 159


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +1

Query: 127 LLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP 237
           +LQ +P+T+   + D ++   + S+GT     +  +P
Sbjct: 51  ILQVRPSTSAAADVDGWQVTPLPSDGTTSPEPDPEIP 87


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 338 HSKGNTVTP 364
           HS GNTVTP
Sbjct: 12  HSLGNTVTP 20


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 31  MSFLGKKYTFDREENFDGFLKFVGLPEDQIRKL 129
           ++F+   YT  +   FDG       PE++ +K+
Sbjct: 133 LAFVNSAYTLVKAYGFDGLDLAWEFPENKPKKI 165


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
 Frame = +1

Query: 286 VDGNTVTHVVEN-----PNGTATFKREYGDTE 366
           +D N  TH+        PNGT     E+GD E
Sbjct: 48  IDPNICTHINYAFLGVYPNGTLQMIDEWGDIE 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,345
Number of Sequences: 336
Number of extensions: 2713
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)