Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n15r
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q552E1 Cluster: CAMP/cGMP-stimulated cAMP/cGMP phosphod...    35   2.5  
UniRef50_P53865 Cluster: Chaotic nuclear migration protein 67; n...    34   3.3  
UniRef50_P34449 Cluster: Uncharacterized protein F54F2.2, isofor...    33   7.6  

>UniRef50_Q552E1 Cluster: CAMP/cGMP-stimulated cAMP/cGMP
           phosphodiesterase; n=2; Dictyostelium discoideum|Rep:
           CAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase -
           Dictyostelium discoideum AX4
          Length = 1096

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 245 ALHFFSSILFPLGTYSLTKVVSYVAVAFFKFSHFSRSCD-GVRGKRRIDELKSF 403
           + H   +I F L  Y+  K +SY A  F+    F +  D GV  K+RI+ LKSF
Sbjct: 646 SFHVIPTIRFKLEIYN--KKISYSADTFYDLQKFKQLKDQGVLSKKRIERLKSF 697


>UniRef50_P53865 Cluster: Chaotic nuclear migration protein 67; n=2;
           Saccharomyces cerevisiae|Rep: Chaotic nuclear migration
           protein 67 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 581

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = -2

Query: 385 DSSFPTNSIAASTKMGKLKERYGNIRNNLSKAVGAKRKQDGRKEMQG*HRDNALAEYLIA 206
           D+   TN++  S ++  L+ R+GN+  N S+ +  K     R ++     +  + E + +
Sbjct: 423 DAEKKTNTL--SKELDNLRSRFGNLEGNTSERITIKNILQSRPDISAEECNFLMVEQIDS 480

Query: 205 KKRFDLENKEKEIVVA 158
                L+N  KEIV+A
Sbjct: 481 ANLTTLQNTVKEIVLA 496


>UniRef50_P34449 Cluster: Uncharacterized protein F54F2.2, isoform
           b; n=2; Eukaryota|Rep: Uncharacterized protein F54F2.2,
           isoform b - Caenorhabditis elegans
          Length = 211

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 361 IAASTKMGKLKERYGNIRNNLSKAVGAKRKQDGRK 257
           +A + K  K+KER+ + R  L + VG KRK  G +
Sbjct: 24  VACTVKKEKIKERHNHNRTLLKRTVGGKRKDTGHR 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,970,031
Number of Sequences: 1657284
Number of extensions: 10662578
Number of successful extensions: 22423
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22401
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)