Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n15r
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 227 CIVPMLALHFFSSILFPLGTYSLTKVVSYV 316
           C+VP+    FF ++ +P    S   +V Y+
Sbjct: 23  CLVPLNPYQFFLAVQYPRIVVSTFNIVFYM 52


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -3

Query: 678 SVFFVCFSIVYLLY*MMTYLQNALKLSFIILSVFII 571
           S+ F CF ++ LLY ++ +   +  ++F+    FI+
Sbjct: 364 SIGFNCFWVMKLLYNVLRFGAESQTINFMFSFGFIL 399


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 678 SVFFVCFSIVYLLY*MMTYLQNALKLSFIILSVFII 571
           S+ FVCFS+V      + +L + L      L++ II
Sbjct: 220 SIVFVCFSLVEDTLPCVFFLGSILIFFIFPLAILII 255


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/13 (53%), Positives = 13/13 (100%)
 Frame = -3

Query: 609 LKLSFIILSVFII 571
           +K++F+I+SVFI+
Sbjct: 250 IKITFVIVSVFIL 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,467
Number of Sequences: 336
Number of extensions: 3064
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)