Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n15f
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    32   0.014
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    31   0.031
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    31   0.041
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.0  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   3.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.6  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   6.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 32.3 bits (70), Expect = 0.014
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 200 SAIDLSICTPQLASSLSWSTLCSTYNSDH 114
           S IDL+ C+P LASS++W    +   SDH
Sbjct: 167 SIIDLTFCSPALASSMNWRVSNAYTLSDH 195


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 215 PGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 99
           PG   S +DL+  +  +A S  W  L S  NSDH  I I
Sbjct: 168 PGRT-SVVDLTFASRTVARSFKWEVLSSYMNSDHRAIRI 205


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 30.7 bits (66), Expect = 0.041
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 200 SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 96
           SAIDL+  +  L  +  W  L    NSDH  I+I+
Sbjct: 173 SAIDLTFVSQSLMETTGWEVLPDYMNSDHIGILIT 207


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 200 SAIDLSICTPQLASSLSWSTLCSTYNSDH 114
           S ID++  +P +    +W  L S + SDH
Sbjct: 170 SVIDVTFASPSIVRYNTWEVLKSYWYSDH 198


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 200 SAIDLSICTPQLASSLSWSTLCSTYN-SDH 114
           S +D++  TP +A   +W+ +C  Y+ SDH
Sbjct: 173 SIVDVAFATPTIAQPGTWN-VCGDYSYSDH 201


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +2

Query: 209 HQAL*GSAYDLRTVEILGCGTRVPCFVTLGNEVPVILKFRADFSSRKLDQDVVININ 379
           HQ L  S Y L    +   GT VPC         +  + R+  + +KL + + I  N
Sbjct: 546 HQVLYPSLYTLAMSTLCIPGTSVPCERLFSKAGQIYSEKRSRLAPKKLQEILFIQQN 602


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 154 REDANWGVQMDRSMALITS 210
           + + NW V  D+S+A++TS
Sbjct: 40  QNNGNWVVDRDKSVAIVTS 58


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 200 SAIDLSICTPQLASSLSWSTLCSTYNSDH 114
           S +D++ C+  L+  L+W    +   SDH
Sbjct: 165 SIVDITFCSTTLSERLNWRVSDALTLSDH 193


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 372 LITTSWSNFLDEKSARNFNITGTSLP 295
           L T +WS++LD ++  +F     S P
Sbjct: 254 LPTVAWSSYLDVRNRDDFRQLNVSFP 279


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -2

Query: 281 KVLESHNLVFLQSLSRRQILTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 102
           ++++S  L  + S +    + +     S ID+   TP +A   +W  +     SDH  I 
Sbjct: 165 QLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATPSIARPETWE-VHEFARSDHQLIT 223

Query: 101 IS 96
            S
Sbjct: 224 YS 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,658
Number of Sequences: 2352
Number of extensions: 11134
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)