Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n15f
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.004
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.009
AY865074-1|AAW79480.1| 319|Drosophila melanogaster SR-CIII prot... 29 4.1
BT023297-1|AAY55713.1| 290|Drosophila melanogaster IP02428p pro... 28 9.4
BT023296-1|AAY55712.1| 290|Drosophila melanogaster IP02425p pro... 28 9.4
AY865078-1|AAW79488.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865077-1|AAW79486.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865076-1|AAW79484.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865075-1|AAW79482.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865073-1|AAW79478.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865071-1|AAW79475.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865070-1|AAW79473.1| 317|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865069-1|AAW79471.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865068-1|AAW79469.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865067-1|AAW79467.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865066-1|AAW79465.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865065-1|AAW79463.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865064-1|AAW79461.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865063-1|AAW79459.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865062-1|AAW79457.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865061-1|AAW79455.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AY865060-1|AAW79453.1| 319|Drosophila melanogaster SR-CIII prot... 28 9.4
AF221506-1|AAF37564.1| 320|Drosophila melanogaster scavenger re... 28 9.4
AE014134-698|AAN11166.1| 320|Drosophila melanogaster CG31962-PA... 28 9.4
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 281 KVLESHNLVFLQSLSRRQILTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 102
+ +++ +L+ L S T + IDL++C+P LA W L + SDH+PII
Sbjct: 153 RFIDNMHLILLNDKSPTHFSTH--NTYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPII 210
Query: 101 IS-FP 90
+ FP
Sbjct: 211 TTLFP 215
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -2
Query: 278 VLESHNLVFLQSLSRRQILTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 99
V+ ++L+ L S + T + ID+S+ +PQ+A SWS + + SDH+PI I
Sbjct: 158 VILENSLIVLNDGSPTHLSTH--NTFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITI 215
>AY865074-1|AAW79480.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K++++GD P+W+SQ
Sbjct: 253 NSFRNICTKLIVSGDQGPNWKSQ 275
>BT023297-1|AAY55713.1| 290|Drosophila melanogaster IP02428p
protein.
Length = 290
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 224 NSFRNICTKLTVSGDQGPNWKSQ 246
>BT023296-1|AAY55712.1| 290|Drosophila melanogaster IP02425p
protein.
Length = 290
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 224 NSFRNICTKLTVSGDQGPNWKSQ 246
>AY865078-1|AAW79488.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865077-1|AAW79486.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865076-1|AAW79484.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865075-1|AAW79482.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865073-1|AAW79478.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865071-1|AAW79475.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865070-1|AAW79473.1| 317|Drosophila melanogaster SR-CIII
protein.
Length = 317
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 251 NSFRNICTKLTVSGDQGPNWKSQ 273
>AY865069-1|AAW79471.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865068-1|AAW79469.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865067-1|AAW79467.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865066-1|AAW79465.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865065-1|AAW79463.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865064-1|AAW79461.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865063-1|AAW79459.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865062-1|AAW79457.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865061-1|AAW79455.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AY865060-1|AAW79453.1| 319|Drosophila melanogaster SR-CIII
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 253 NSFRNICTKLTVSGDQGPNWKSQ 275
>AF221506-1|AAF37564.1| 320|Drosophila melanogaster scavenger
receptor-like proteinCIII precursor protein.
Length = 320
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 254 NSFRNICTKLTVSGDQGPNWKSQ 276
>AE014134-698|AAN11166.1| 320|Drosophila melanogaster CG31962-PA
protein.
Length = 320
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 NYFLNLINKILLTGDIPPSWRSQ 4
N F N+ K+ ++GD P+W+SQ
Sbjct: 254 NSFRNICTKLTVSGDQGPNWKSQ 276
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,521,548
Number of Sequences: 53049
Number of extensions: 490480
Number of successful extensions: 1174
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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