Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n08r
(773 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 60 1e-09
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 56 3e-08
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 51 7e-07
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 51 7e-07
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 46 4e-05
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 44 9e-05
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 43 2e-04
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 42 6e-04
At2g28100.1 68415.m03413 glycosyl hydrolase family 29 / alpha-L-... 35 0.069
At5g13540.2 68418.m01564 expressed protein HERC2 - Homo sapiens,... 30 2.0
At4g17240.1 68417.m02592 expressed protein 30 2.0
At3g19870.1 68416.m02516 expressed protein 29 2.6
At1g12810.1 68414.m01488 proline-rich family protein contains pr... 29 2.6
At3g52710.1 68416.m05807 expressed protein predicted protein, Ar... 29 4.5
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 60.5 bits (140), Expect = 1e-09
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Frame = -3
Query: 771 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 592
EY +Q+H+H + EH ++G +A E H VH G +AVV L
Sbjct: 123 EYELQQLHWH------SPSEHTINGRRFALELHMVH-----------EGRNRRMAVVTVL 165
Query: 591 LETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGN--YVTYKGSLTTP 418
+ R D ++ LE + + M +++ +D ++IG+ Y Y GSLTTP
Sbjct: 166 YKI-----GRADTFIRSLEKELEGIAEMEEAEKNVGMIDPTKIKIGSRKYYRYTGSLTTP 220
Query: 417 PYTECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQR 283
P T+ VTW + K + +Q+ LLR D+ R V+PT +
Sbjct: 221 PCTQNVTWSVVRKVRTVTRKQVKLLRVAVHDDANSNARPVQPTNK 265
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 55.6 bits (128), Expect = 3e-08
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Frame = -3
Query: 762 FEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLET 583
++ + HW EH LDG A E H VH +S+E GH LAV+G L
Sbjct: 111 YKLVQSHWHAPS----EHFLDGQRLAMELHMVH-----KSVE---GH---LAVIGVLFRE 155
Query: 582 VDAPNPRFDRL---VQGLEGIQKRE-SVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPP 415
+ PN R+ + + +Q E S+ + W + + Y+GSLTTPP
Sbjct: 156 GE-PNAFISRIMDKIHKIADVQDGEVSIGKIDPREFGW------DLTKFYEYRGSLTTPP 208
Query: 414 YTECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQRHPPGHSVIYVKQVRS 238
TE V W I K + EQ+ +L E+N RP Q P ++Y+ + S
Sbjct: 209 CTEDVMWTIINKVGTVSREQIDVLTDAR---RGGYEKNARPAQ--PLNGRLVYLNEQSS 262
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 51.2 bits (117), Expect = 7e-07
Identities = 43/159 (27%), Positives = 68/159 (42%)
Frame = -3
Query: 762 FEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLET 583
F + HW + EH ++G Y E H VH +++ + AV+G L +
Sbjct: 119 FNLVQCHWH----SPSEHTVNGTRYDLELHMVHTSARGRT-----------AVIGVLYK- 162
Query: 582 VDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPPYTEC 403
+ PN +L+ G++ + +E + + + Q + Y GSLT PP TE
Sbjct: 163 LGEPNEFLTKLLNGIKAVGNKEINLGMIDPREI-----RFQTRKFYRYIGSLTVPPCTEG 217
Query: 402 VTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQ 286
V W + ++ I EQ+ LRQ E N RP Q
Sbjct: 218 VIWTVVKRVNTISMEQITALRQAV---DDGFETNSRPVQ 253
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 51.2 bits (117), Expect = 7e-07
Identities = 50/164 (30%), Positives = 69/164 (42%), Gaps = 3/164 (1%)
Frame = -3
Query: 768 YIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLL 589
Y QMH+H T EH L G YAAE H VH DG V L
Sbjct: 113 YTLLQMHWH------TPSEHHLHGVQYAAELHMVHQAK------------DGSFAVVASL 154
Query: 588 ETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLW-MDREDLQ--IGNYVTYKGSLTTP 418
+ P ++ + L +++ N T++ + +D ++ Y Y GSLTTP
Sbjct: 155 FKIGTEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTP 214
Query: 417 PYTECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQ 286
P +E V+W I K + EQ+ LLR P + N RP Q
Sbjct: 215 PCSENVSWTILGKVRSMSKEQVELLR---SPLDTSFKNNSRPCQ 255
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 45.6 bits (103), Expect = 4e-05
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Frame = -3
Query: 771 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 592
+Y Q H+H + EH ++G Y E H VH ++ ++ VVG L
Sbjct: 119 DYKLVQCHWH------SPSEHTINGTSYDLELHMVHTSASGKT-----------TVVGVL 161
Query: 591 LETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQI--GNYVTYKGSLTTP 418
+ + P+ +++ G++G+ K+E + + +D D++ N+ Y GSLT P
Sbjct: 162 YK-LGEPDEFLTKILNGIKGVGKKEIDLGI-------VDPRDIRFETNNFYRYIGSLTIP 213
Query: 417 PYTECVTWIIYEK 379
P TE V W + ++
Sbjct: 214 PCTEGVIWTVQKR 226
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 44.4 bits (100), Expect = 9e-05
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Frame = -3
Query: 771 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 592
EY Q+H+H + EH ++G +A E H VH N LAVV L
Sbjct: 95 EYKLLQLHWH------SPSEHTMNGRRFALELHMVHENIN-----------GSLAVVTVL 137
Query: 591 LETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGN--YVTYKGSLTTP 418
+ + P+ L L I + N + + +D D++IG+ + Y GSLTTP
Sbjct: 138 YK-IGRPDSFLGLLENKLSAITDQ----NEAEKYVDVIDPRDIKIGSRKFYRYIGSLTTP 192
Query: 417 PYTECVTWIIYEK 379
P T+ V W + +K
Sbjct: 193 PCTQNVIWTVVKK 205
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 43.2 bits (97), Expect = 2e-04
Identities = 44/180 (24%), Positives = 75/180 (41%)
Frame = -3
Query: 771 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 592
EY +Q+H+H + EH L+G + E H VH + + A + L +
Sbjct: 106 EYKLQQIHWH------SPSEHTLNGKRFVLEEHMVHQSKDGRNAVVAFFYK--LGKPDYF 157
Query: 591 LETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPPY 412
L T++ R ++ + + + + + + + +Y + GSLTTPP
Sbjct: 158 LLTLE-------RYLKRITDTHESQEFVEMVHPRTFGFESK-----HYYRFIGSLTTPPC 205
Query: 411 TECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQRHPPGHSVIYVKQVRSKL 232
+E V W I ++ + +QL +LR S N RP QR +Y+ SKL
Sbjct: 206 SENVIWTISKEMRTVTLKQLIMLRVTVHDQS---NSNARPLQRKNERPVALYIPTWHSKL 262
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Frame = -3
Query: 768 YIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLL 589
Y QMH+H T EH L G YAAE H VH DG V L
Sbjct: 113 YTLLQMHWH------TPSEHHLHGVQYAAELHMVHQAK------------DGSFAVVASL 154
Query: 588 ETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLW-MDREDLQ--IGNYVTYKGSLTTP 418
+ P ++ + L +++ N T++ + +D ++ Y Y GSLTTP
Sbjct: 155 FKIGTEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTP 214
Query: 417 PYTECVTWIIYEKPV 373
P +E V+W I K +
Sbjct: 215 PCSENVSWTILGKVI 229
>At2g28100.1 68415.m03413 glycosyl hydrolase family 29 /
alpha-L-fucosidase, putative similar to
alpha-L-fucosidase SP:P10901 from [Dictyostelium
discoideum]
Length = 506
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 557 SNLGLGASTVSRRNPTTANPSGWPTAVSKDSYL--LL*WTKWHSAAYPWPSSTCSHPVKS 730
S G G + S NPT N S W ++KDS ++ K H WPS + VKS
Sbjct: 64 SEWGTGKANPSIFNPTHLNASQW-VQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVKS 122
Query: 731 STDQWK 748
S QW+
Sbjct: 123 S--QWR 126
>At5g13540.2 68418.m01564 expressed protein HERC2 - Homo sapiens,
EMBL:AF071172; isoform contains non-consensus GG
acceptor splice site at intron 6
Length = 788
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3
Query: 480 MDREDLQIGNYVTYKGSLTTPPY 412
++ E+L+IG++V K S+TTP Y
Sbjct: 656 IEEEELKIGDWVRVKASITTPTY 678
>At4g17240.1 68417.m02592 expressed protein
Length = 200
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 690 YAAE-CHFVHYNSKYESLETAVGHPDGLAV 604
Y +E C++ S Y+SLE + G PDGLA+
Sbjct: 96 YLSESCYWQAQTSSYDSLEFSSGSPDGLAL 125
>At3g19870.1 68416.m02516 expressed protein
Length = 1117
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 702 DGHGYAAECHFVHYNSKYESLET-AVGHPDGLAVVGFLLETVDAPNPRFDRLVQGL 538
DG E V + S S+++ +VGH + AVV LL V+ PN FDR + +
Sbjct: 102 DGSSGLKEQAMVSFTSVLVSIDSFSVGHVE--AVVDLLLALVNRPNHGFDRQARAI 155
>At1g12810.1 68414.m01488 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 129
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 519 PSSESPPDLVLVYRTSGWERRQSPGGIRPQPIHRDG-PPPSP 641
P S PP Y G+ P G P H +G PPP P
Sbjct: 8 PESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQP 49
>At3g52710.1 68416.m05807 expressed protein predicted protein,
Arabidopsis thaliana
Length = 289
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 604 GRIPPGDCRRSQPEVR*TSTRSGGDSEEGV 515
GR+PPGD +S P+ T +R D E V
Sbjct: 238 GRLPPGDVGKSSPQRNSTGSRRSIDGGEPV 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,176,123
Number of Sequences: 28952
Number of extensions: 384557
Number of successful extensions: 1214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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