Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n08f
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.65 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 120 KLWIDFHCPVVHLIVNII*YNSNFKI 43
           +LW+D+ C    LIV I  Y   F +
Sbjct: 250 QLWVDYGCSPKKLIVGIPFYGRTFTL 275


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 464  WHSAAYPWPSSTCSHPVKSST 402
            W+     WP +T  HP  SST
Sbjct: 2271 WNKDHCDWPENTECHPDASST 2291


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 377 KMYSPIRGPPLRVGLTDASLN 315
           + Y+P R PPL  G+ D + N
Sbjct: 288 RSYAPERYPPLAQGVNDDAFN 308


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +1

Query: 67  YNIHDQMDNRTVKIDPKFLSAQPKKTSSDAEHISRLR 177
           Y+ H+        I PK L +  ++ +   EH+++ R
Sbjct: 576 YDFHNMSFENDFIIQPKHLLSIARQVALGMEHLAKTR 612


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,657
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)