Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n08f
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 42 3e-04
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 41 9e-04
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 40 0.001
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 40 0.002
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 36 0.033
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 34 0.076
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 33 0.13
02_02_0076 + 6581428-6581695,6582247-6582305,6582481-6582531,658... 33 0.18
02_05_0599 - 30251708-30251815,30251864-30251984,30252068-302522... 33 0.23
10_01_0129 + 1535823-1537196 32 0.41
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 30 1.2
07_03_0190 + 14893243-14893582,14893684-14893808 30 1.2
12_02_0643 - 21461123-21461902 29 2.2
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 29 3.8
01_06_0207 + 27534226-27534723 25 5.0
11_01_0081 - 622811-623551 28 5.0
06_02_0266 - 13593346-13594151,13594425-13594743 28 5.0
03_01_0070 + 577328-577835,578106-578136,578184-578196 28 5.0
02_05_1291 - 35516715-35517251,35517339-35518185,35518480-355190... 28 5.0
12_01_0082 - 662016-663215 28 6.6
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960... 28 6.6
08_02_0848 - 21835146-21835217,21835712-21835759,21835846-218359... 28 6.6
08_01_0048 + 335868-336682,338382-340386 28 6.6
10_08_0947 + 21749062-21749411,21750471-21750759 27 8.7
01_03_0181 + 13523172-13524641 27 8.7
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/104 (29%), Positives = 42/104 (40%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI + L L L Y NANA ++N G F D +GG +I
Sbjct: 61 QSPINLGLLDLTLAPGLGDLN---YTYRNANATVVNRGHDIMVRF-DGGDDAAAAGGLVI 116
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYES 495
+ HW EH +DG Y E H VH N++ ++
Sbjct: 117 NGTAYRLRQVHWHAPS----EHAVDGRRYDMELHMVHLNTQNQT 156
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 40.7 bits (91), Expect = 9e-04
Identities = 35/121 (28%), Positives = 50/121 (41%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI + L L L Y NANA ++N G F+ + ++G
Sbjct: 64 QSPINLGLLDLTLAPGLGNLN---YTYKNANASVVNRGHDIMVRFDGDAGSLKINGTA-- 118
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGF 543
Y QMH+H T EH +DG Y E H VH N++ ++ + + G F
Sbjct: 119 --YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQNQAAVIGILYTIGTTPDEF 170
Query: 544 L 546
L
Sbjct: 171 L 171
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/104 (30%), Positives = 45/104 (43%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI + L L L Y NANA ++N G F+ + ++G
Sbjct: 65 QSPINLGLLDLTLAPGLGNLN---YTYQNANASVVNRGHDIMVRFDGDAGSLKINGTA-- 119
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYES 495
Y QMH+H T EH +DG Y E H VH N++ ++
Sbjct: 120 --YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQNQA 155
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/98 (30%), Positives = 45/98 (45%)
Frame = +1
Query: 181 SQSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPL 360
SQSPI I+ S LD L + Y + NA ++NNG F+ + ++G P
Sbjct: 238 SQSPIDINTKTVVPRSDLDTLD-RNY--NAVNATIVNNGKDITMKFHGEVGQVIIAGKP- 293
Query: 361 IGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
Y F+ +H+H EH ++G + E H VH
Sbjct: 294 ---YRFQAIHWH------APSEHTINGRRFPLELHLVH 322
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 35.5 bits (78), Expect = 0.033
Identities = 28/99 (28%), Positives = 49/99 (49%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI I + +++PL + Y + ANA L++N + +A+ +++G
Sbjct: 58 QSPIDIDTNNLVHELNMEPLH-RNY--TAANATLVDNIFNVALRYEEAAGVLSINGV--- 111
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYN 480
+Y +QMH+H + EH ++G + E H VH N
Sbjct: 112 -KYTLKQMHWH------SPSEHTINGFRFPLELHMVHTN 143
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 34.3 bits (75), Expect = 0.076
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Frame = +1
Query: 157 EHISRLRPSQSPIAISLSRCPTWSSLDPLKFK---GYWDSN---ANAILLNNGSTAYFTF 318
EH +L+P + + P S + +K GY D + A A ++N G F
Sbjct: 47 EHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSYRAAEASIVNRGHDIMVRF 106
Query: 319 NDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYES- 495
+ + ++G Y Q+H+H + EH +DG Y E H VH +++ ++
Sbjct: 107 DGDAGSVVINGTA----YYLRQLHWH------SPTEHSVDGRRYDMELHMVHESAEKKAA 156
Query: 496 ---LETAVGHPD 522
L VG PD
Sbjct: 157 VIGLLYEVGRPD 168
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI I L+PL+ Y + AN +++N +ND + + G
Sbjct: 57 QSPINILKDDAVYNPKLEPLEMD-Y--TAANTTIVDNVFNIALRYNDTAGTVKVDGK--- 110
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYN 480
+Y Q+H+H + EH ++G +A E H VH++
Sbjct: 111 -KYKLRQLHWH------SPSEHTINGQRFAVELHMVHHS 142
>02_02_0076 +
6581428-6581695,6582247-6582305,6582481-6582531,
6582766-6582898,6583533-6583618,6583955-6584008,
6584576-6584645,6585198-6585259,6585370-6585457,
6585645-6585728,6585820-6586028
Length = 387
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 94 RTVKIDPKFLSAQPKKTSSDA--EHISRLRPSQSPIAISLSRCPT--WSSLDPLKFKGYW 261
RTVK P+FL +TS+D+ E ++++ ++ ++++ CP W +D G
Sbjct: 169 RTVKPKPRFLRVNTLRTSTDSVIEELNKIHKGKASCMVAVALCPEPGWKVIDACAAPG-- 226
Query: 262 DSNANAILLNNGSTAYFTFN 321
+ + L NG T N
Sbjct: 227 NKTVHLAALMNGEGNIETIN 246
>02_05_0599 -
30251708-30251815,30251864-30251984,30252068-30252215,
30252303-30252480,30252587-30252625,30252704-30252799,
30252879-30253030,30253336-30253722,30253836-30253940,
30254083-30254098
Length = 449
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 407 MTSPDASTCSMATGTPQNATSSTITVNTNPW 499
+TS S+ MATGTPQN ++ N PW
Sbjct: 305 VTSTTTSSSHMATGTPQNLEKNSTPSNQPPW 335
>10_01_0129 + 1535823-1537196
Length = 457
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -2
Query: 580 RTSGWERRQSPGGIRPQPIHRDGPPPSPRIR 488
R SG SPG IR P DG PP PR R
Sbjct: 43 RPSGSSPTSSPGQIRSPPDDGDGQPPPPRRR 73
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/97 (28%), Positives = 41/97 (42%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI +S R + L + Y A A ++N G F + R ++G
Sbjct: 64 QSPIDLSHERL-----MRNLGYLDYSYLPAEASMVNRGHDIEVKFMGNAGRVVINGKA-- 116
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
Y +Q+H+H T EH ++G Y E H VH
Sbjct: 117 --YKLKQLHWH------TPSEHTVNGRRYDMELHLVH 145
>07_03_0190 + 14893243-14893582,14893684-14893808
Length = 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 501 DGGGPSRWIGCGRI-PPGDCRRS 566
D GGP RW G R PP D RRS
Sbjct: 53 DDGGPRRWPGLSRTSPPRDLRRS 75
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 580 RTSGWERRQSPGGIRPQPIHRDGPPPSPR 494
RT ERR+SP +R +P R PPP PR
Sbjct: 202 RTPPPERRESPSPLRGRP--RTPPPPRPR 228
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 289 NNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHF 468
N G + D + + T+ G EY +Q+H+H EH ++G + AE H
Sbjct: 114 NRGHDYMLKWKDGNSKLTVQGK----EYTLKQVHWH------EPSEHTINGTRFDAEMHM 163
Query: 469 VH 474
VH
Sbjct: 164 VH 165
>01_06_0207 + 27534226-27534723
Length = 165
Score = 24.6 bits (51), Expect(2) = 5.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 492 ILGDGGGPSRWIGCGRIPPGD 554
+LGDGGGPS G G GD
Sbjct: 56 LLGDGGGPSVHGGGGPSVHGD 76
Score = 22.2 bits (45), Expect(2) = 5.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 489 RILGDGGGPS 518
R+LGD GGPS
Sbjct: 14 RLLGDDGGPS 23
>11_01_0081 - 622811-623551
Length = 246
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 211 RCPTWSSLDPLKFKGYWDSNANAILLNNGSTAY 309
R P WSSL P F Y ++ + + + ST Y
Sbjct: 38 RTPCWSSLQPPPFANYMHADITSYTVVDSSTIY 70
>06_02_0266 - 13593346-13594151,13594425-13594743
Length = 374
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 256 YWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEY 372
YW + + +L+N ++ T +RP L+G P ++
Sbjct: 37 YWRTQIDLLLINVARESFCTMGMYELRPLLAGDPTFSDF 75
>03_01_0070 + 577328-577835,578106-578136,578184-578196
Length = 183
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 599 RPCTSLSNLGLGASTVSRRNPTTANPSGWPTAV 501
RPC L + S+VSR NP NP+ T V
Sbjct: 27 RPCGHAQTLLISFSSVSRPNPDPNNPTPLTTTV 59
>02_05_1291 -
35516715-35517251,35517339-35518185,35518480-35519009,
35519092-35519529
Length = 783
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -3
Query: 165 NVLGIRRSFLRLSAQKLWIDFHCP--VVHLIVNI 70
NVL IR L ++K+W+ CP + H++ N+
Sbjct: 590 NVLSIRDLHLNFLSEKIWVQPECPKLLAHVLRNL 623
>12_01_0082 - 662016-663215
Length = 399
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 211 RCPTWSSLDPLKFKGYWDSNANAILLNNGSTAY 309
R P WSSL P F Y ++ + + + ST Y
Sbjct: 192 RTPYWSSLQPPPFANYMHADITSYTVVDSSTIY 224
>09_02_0466 +
9599389-9599662,9600324-9600643,9600950-9601186,
9601278-9601445,9601778-9601966
Length = 395
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 409 DFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVV 537
D+ ++DG A + F + ++ AVGH GLAVV
Sbjct: 93 DYDSTATIIDGKSVAEDIRF-QIAEEVRQMKNAVGHVPGLAVV 134
>08_02_0848 -
21835146-21835217,21835712-21835759,21835846-21835943,
21836028-21836136,21837362-21837594,21837664-21837749,
21838038-21838095,21839068-21839135,21839258-21839565
Length = 359
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +3
Query: 510 GPSRWIGCGR-IPPG---DCRRSQPEVR*TSTRSGG 605
G +RWIGC R PP + + +PEV R GG
Sbjct: 36 GGARWIGCFRPAPPAAVKEAKGKRPEVEKEPARGGG 71
>08_01_0048 + 335868-336682,338382-340386
Length = 939
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = -1
Query: 401 DQWKCICSKMYSPIRGPPLRVGLTDASLNVKYAVDPLFKSMALALLSQYPLNLRGSSEDQ 222
++WK I + +P G+ + LN+ Y PL L + +YP + ++
Sbjct: 385 EEWKSIRDSLGAPFDKNKSLEGMRNI-LNLSYKNLPLHLKTCLLYIGKYPEDYEIGRDEL 443
Query: 221 VGHRLNDIAIGDCEGLNLE 165
V + + +G+ G NLE
Sbjct: 444 VTEWIAEGIMGNPHGENLE 462
>10_08_0947 + 21749062-21749411,21750471-21750759
Length = 212
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 163 CARHQKKFSSVERSETLDRFSLSCCPSDRE 74
CA Q + + +E+ +D L CCPSD++
Sbjct: 161 CAVLQSEMTYLEQPPAVDLPRLHCCPSDQD 190
>01_03_0181 + 13523172-13524641
Length = 489
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 604 PPDLVLVYRTSGWERRQSPGGIRPQ-PIHRDGPPPSPRI 491
P L ++ + ERR+ PGG R + + G PP P++
Sbjct: 189 PTVLSMIVNATADERRRQPGGRRRRVTVMTGGAPPPPQV 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,317,859
Number of Sequences: 37544
Number of extensions: 394562
Number of successful extensions: 1434
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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