Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n08f
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09) 81 9e-16
SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0) 77 1e-14
SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05) 59 3e-09
SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15) 49 3e-06
SB_26056| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 31 0.72
SB_35020| Best HMM Match : Cu-oxidase_2 (HMM E-Value=1.1e-09) 30 1.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_53363| Best HMM Match : Peptidase_S15 (HMM E-Value=1.49939e-43) 29 3.9
SB_47919| Best HMM Match : Uricase (HMM E-Value=8.2e-35) 29 3.9
SB_9710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 6.7
SB_50120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_46481| Best HMM Match : Ribosomal_L6e (HMM E-Value=1.5) 27 8.9
SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19) 27 8.9
>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 81.0 bits (191), Expect = 7e-16
Identities = 54/145 (37%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Frame = +1
Query: 124 SAQPKKTSSDAEHISRLRPSQSPIAISLSRCPTWSSLDPLKFKGY--WDSNANAILLNNG 297
S P K SS + SQSPI I S SL L+F + + + L NNG
Sbjct: 434 SKGPSKWSSSFSQCNG--SSQSPIDIITSSVAFDQSLGELQFVNFDTIPTGSKISLKNNG 491
Query: 298 STAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHY 477
A T+SGG L Y Q H HW + G EH++DG +A H V Y
Sbjct: 492 HAFQVNMLSAGTF-TVSGGGLGATYSTVQFHLHWGSKNEQGSEHLIDGKAFAGAIHIVSY 550
Query: 478 NSKYESLETAVGHPDGLAVVGFLLE 552
N+KY ++ AV DGLAVVG LL+
Sbjct: 551 NTKYPNISAAVDKSDGLAVVGILLK 575
>SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)
Length = 252
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/126 (38%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 181 SQSPIAISLSRCPTWSSLDPLKFKGY--WDSNANAILLNNGSTAYFTFNDASVRPTLSGG 354
SQSPI I S SSL L+F + S A ++ NNG F ++ + GG
Sbjct: 128 SQSPINIVTSSVMYDSSLGKLQFNNFDRIPSGAKIMVRNNGHAFQVNFMTPNLF-YVHGG 186
Query: 355 PLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAV 534
L + Q H H DD G EH++DG AA H V+YN+KY + TA DGLAV
Sbjct: 187 GLGANFTTAQFHMHLGEDDTRGAEHLIDGQRNAACIHIVNYNTKYPDISTAANKSDGLAV 246
Query: 535 VGFLLE 552
+G +LE
Sbjct: 247 IGVILE 252
>SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)
Length = 291
Score = 76.6 bits (180), Expect = 1e-14
Identities = 45/140 (32%), Positives = 64/140 (45%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI I+ SL L + + + + +L+N+ A +S +G L
Sbjct: 56 QSPININTEEAKYDGSLTDLDIR--YPNTTDVLLVNHHGHAIEADILSSEPFVATGADLS 113
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGF 543
Y Q HFH D G EH + G Y E H VHYN KY + +A G DGLAV+
Sbjct: 114 SRYRLAQFHFHVGSSDIQGSEHHIHGVKYPLEMHLVHYNDKYPNASSAQGLLDGLAVISV 173
Query: 544 LLETVDAPNPRFDRLVQGLE 603
L E+ NP + ++ L+
Sbjct: 174 LFESSSTDNPALNEIIDNLQ 193
>SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Frame = +1
Query: 343 LSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSK-YESLETAVG-- 513
++ GPL +Y F Q HFHW D+ G EH +DG Y +E H VHYNS Y+ +A+
Sbjct: 2 ITSGPLSHKYKFAQFHFHWGKDEKEGSEHRVDGKMYPSEMHIVHYNSDLYKDAASAMSSD 61
Query: 514 HPDGLAVVGFLLE--TVDAPN 570
+ DGL V+G LE +V PN
Sbjct: 62 NKDGLCVLGVFLEGSSVAVPN 82
>SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05)
Length = 134
Score = 58.8 bits (136), Expect = 3e-09
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI I SSL L ++ AN+ L N+G T TF A+ LSGGPL
Sbjct: 33 QSPIDIVTKDVTQDSSLGSLW--NTYEPVANSTLTNDGRTLQLTF--ANNNNVLSGGPLT 88
Query: 364 GEYIFEQMHFHW-SVDDFTGCEHVLDGHGYAAECHFVH 474
EY + FHW + ++ G EH++D G+A E + +H
Sbjct: 89 DEYQLAMIKFHWAATEESAGSEHMIDSQGHAIEVNALH 126
>SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)
Length = 338
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 370 YIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVV 537
Y E + FH+ +D+ G EH +DG + E + +N+KY ++ A DGL VV
Sbjct: 102 YQLETVRFHFGCNDWLGSEHAVDGRRHPGEIQMIFHNTKYSNVSDAADKSDGLLVV 157
>SB_26056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = -1
Query: 413 KSSTDQWKCICSKMYSPIRGPPLRVGLTDASLNVKYAVDPLFKSMALALLSQYPLNLRGS 234
K+S + I +KM ++ P + D + V + D + + ++A ++ L R
Sbjct: 5 KASKEDANSITNKMPERLKMPEPLSAVDDHVILVNDSTD-IDEMRSVACQTEDLLASRVE 63
Query: 233 SEDQVGHRLNDIAIGDCEGLNLEMC 159
E+ GHR ND + + + LE+C
Sbjct: 64 DEENCGHRYNDTSTAELSQIKLELC 88
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 31.1 bits (67), Expect = 0.72
Identities = 25/94 (26%), Positives = 41/94 (43%)
Frame = +1
Query: 85 MDNRTVKIDPKFLSAQPKKTSSDAEHISRLRPSQSPIAISLSRCPTWSSLDPLKFKGYWD 264
+ + T P + SA P T++ + S P+ SPI SL++C T S+D +
Sbjct: 1216 LPHETSATSPPYTSASPVPTTTPSASSS---PTISPIGSSLAQCSTVDSMDKPSLRPIGT 1272
Query: 265 SNANAILLNNGSTAYFTFNDASVRPTLSGGPLIG 366
A +TA + + P + GG L+G
Sbjct: 1273 ERA-----CRRATASPLPSMPGISPLIGGGKLVG 1301
>SB_35020| Best HMM Match : Cu-oxidase_2 (HMM E-Value=1.1e-09)
Length = 179
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 40 FNFKIAIILYNIHDQMDNRTVKIDPKFLSAQPKKTSSDAEHISRLRP---SQSPIAISLS 210
+ F+I I Y + +Q R ++ +P A + S +R R S PI ++
Sbjct: 24 YGFQIMKIGYPVVNQTTGRPIRRNPDI--ACENEICSRTRWKTRPRSALLSDRPIVKNVV 81
Query: 211 RCPTWSSLDPLKFK----GYWDSNANAIL-LNNGSTAYFTFNDASVRPTLSGGPLIGEYI 375
P + L+FK GYW + + +L L+ G + + + P +G P G+Y
Sbjct: 82 NVPAYGYA-VLRFKSNNPGYWLLHCHQMLHLSEGMSLTLNITEKGLPPPPAGFPTCGDYS 140
Query: 376 FEQMHFH 396
+ FH
Sbjct: 141 VGKDEFH 147
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 DTIRKSNTSNAGLFNFKIAIILYN-------IHDQMDNRTVKIDPKFLS-AQPKKTSSDA 156
D RKSNTS+ GL + I ++ IH+Q +R ++ + AQP T+S
Sbjct: 765 DVSRKSNTSSDGLVGKVLGQIGHSTYTAQEEIHEQKPSRKTNVEQVLKAIAQPTSTTSQK 824
Query: 157 EHISRLRPSQSPIAISLSRCPTWSSLDP 240
+ ++ P + S +S++DP
Sbjct: 825 KVVTETFPQPRDMIGSTMTKIIFSAIDP 852
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 193 IAISLSRCPTWSSLDPL-KFKGYWDSNANAILLNNGSTAYFTFNDAS 330
+++S+SR TWSSL+ L Y S NAI+ + S F+ D S
Sbjct: 2118 VSLSVSRQRTWSSLENLNNAVDYVGSMNNAIMRKSSSMKNFSQRDQS 2164
>SB_53363| Best HMM Match : Peptidase_S15 (HMM E-Value=1.49939e-43)
Length = 461
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 461 HSAAYPWPSSTCSHPVKSSTDQWK--CICSKMYSPIRGPPLRVG 336
H ++YPW ++ SH + D WK IC +S I P L +G
Sbjct: 158 HHSSYPWMNTWLSHQTRD--DYWKHASICED-FSQISCPVLLIG 198
>SB_47919| Best HMM Match : Uricase (HMM E-Value=8.2e-35)
Length = 537
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +1
Query: 316 FNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYES 495
++D S T +G L+G ++ H H S+ F G +L GH E Y++ +
Sbjct: 269 YSDTSWTHTSTG--LLGYFL--DTHKHVSMTLFKGATRILPGHAQTRE-----YDTFKRA 319
Query: 496 LETAVGHPDGLAVVGFLLET 555
GH ++G+ L+T
Sbjct: 320 TRILPGHAQTRGLLGYFLDT 339
>SB_9710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 SPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFND--ASVRPT 342
S +A+++SR + +P Y+ SNA+ I+ NN S+ +ND +RPT
Sbjct: 11 SSLAMTVSRVFYFFFAEPYT---YYQSNASCIIFNNDSSRSSRYNDDICCLRPT 61
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 112 PKFLSAQPKKTSSDAEHISRLRPSQSPIAISLS 210
P+ + A P++ S +H+S R SQ+P S S
Sbjct: 378 PQRVQASPRRRSQSPDHVSPRRKSQTPNRASTS 410
>SB_50120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 469 VHYNSKYESLETAVGHPDGLAVVGFLLETV---DAPNPRF 579
V + + Y S+E A DGL VVG L+ + ++ NP F
Sbjct: 2 VFFKTVYGSVEKAADKTDGLTVVGVFLKKISLLNSVNPSF 41
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +2
Query: 320 TTRQ*DRPSAGAPXXXXXXXXXXXXXGP*MTSPDASTCSMATGTPQNATSSTITVNTN 493
TT +PS P P T+P +T + AT TP T T T T+
Sbjct: 32 TTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
>SB_46481| Best HMM Match : Ribosomal_L6e (HMM E-Value=1.5)
Length = 221
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3
Query: 312 EICSRSII*KYGVSVAVPISLEL 244
++C+R++I V++AVPIS EL
Sbjct: 2 KLCARAVIRSKAVTIAVPISREL 24
>SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19)
Length = 879
Score = 27.5 bits (58), Expect = 8.9
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Frame = +1
Query: 85 MDNRTVKIDPKFLSAQPKKTSSDAEHISRLRPSQSPIAISLSRCPTWSSL-DPLKFKGYW 261
M IDP + P T+ + PS P S ++S+ DPL++ +W
Sbjct: 1 MSQNPPNIDPTQV-VPPSNTTQVVPPPNITHPSNQPFIPQASNFNSYSTRGDPLEWMTFW 59
Query: 262 DSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYI 375
DS A+ G FN + + IG Y+
Sbjct: 60 DSFNVAVHSKPGLPDVDKFNYLKAQVSGEAEQAIGGYL 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,470,478
Number of Sequences: 59808
Number of extensions: 423221
Number of successful extensions: 1252
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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