Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n08f
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 68 5e-12
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 67 8e-12
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 65 3e-11
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 64 1e-10
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 46 2e-05
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 44 6e-05
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 31 0.48
Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical pr... 29 1.9
U88168-1|AAC24403.2| 376|Caenorhabditis elegans Hypothetical pr... 29 2.6
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 28 5.9
Z75538-2|CAA99840.1| 476|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 68.1 bits (159), Expect = 5e-12
Identities = 46/123 (37%), Positives = 54/123 (43%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI I L + D +KF Y D ++NNG + T S P + GG L
Sbjct: 24 QSPINIDLGEVERKDTHDGIKFVNY-DHPIQGDIVNNGHSVQMTPELRSEHPEIYGGGLD 82
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGF 543
Y Q HFHW +D G EH L G Y AE H VH V P LAVVG
Sbjct: 83 QVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHLVH---------QGVEDPGKLAVVGV 133
Query: 544 LLE 552
L+
Sbjct: 134 FLQ 136
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 67.3 bits (157), Expect = 8e-12
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Frame = +1
Query: 184 QSPIAISLSRCPT--WSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDA--SVRPTLSG 351
QSPI I R P ++ L + F Y D + L N G T + ++ +P + G
Sbjct: 49 QSPIDI---RAPDVDYALLHRMHFLNY-DMDGKIELSNTGRTLFAGGFESWQHKQPMIQG 104
Query: 352 GPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLA 531
G L Y Q H HW +D G EH + Y AE H VH +L+ A+ PDGLA
Sbjct: 105 GGLKHRYKLAQFHLHWGQNDAVGSEHAMGSLHYPAELHLVHVREGL-TLKEALSRPDGLA 163
Query: 532 VVG-FLLETVDAPNPRFDRLVQGL 600
VVG FL +T D +F + + L
Sbjct: 164 VVGVFLAKTNDPVANKFSPISERL 187
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +1
Query: 367 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 546
++ Q H HW + G EH LDG + E HFV +N+ YES A+ PDGLAVVG
Sbjct: 69 KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 128
Query: 547 LE 552
L+
Sbjct: 129 LK 130
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +1
Query: 367 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 546
++ Q H HW + G EH LDG + E HFV +N+ YES A+ PDGLAVVG
Sbjct: 114 KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 173
Query: 547 LE 552
L+
Sbjct: 174 LK 175
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/144 (25%), Positives = 66/144 (45%)
Frame = +1
Query: 160 HISRLRPSQSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRP 339
++ L +QSPI I L F+ ++S +N+G++ + S
Sbjct: 60 NVPSLGRTQSPIDIVPVITAFGEHLQNAHFEVTYESTGEFKAVNDGNSIWLMREGNSSEL 119
Query: 340 TLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHP 519
+S P +Y + ++FHW+ + G EH + G GYA E H +H N+++ ++ A+ P
Sbjct: 120 AISFLPE-EQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQP 178
Query: 520 DGLAVVGFLLETVDAPNPRFDRLV 591
+G+ + L N F L+
Sbjct: 179 NGVIAIAVFLNESHDDNAVFSPLI 202
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLS--GGP 357
QSP+ I S+ L P+ +G + A+ N G T D RPT++ GGP
Sbjct: 36 QSPVNIDPSQLLYDPHLMPINIEG---NIVEAVFENTGQLPVVTVKDLPNRPTINITGGP 92
Query: 358 LIG-EYIFEQMHFHWSVDDF--TGCEHVLDGHGYAAECHFVHYNSK-YESLETAVGHPDG 525
+ Y Q+ H+ D G EH +D + AE + YNS Y + A+ P G
Sbjct: 93 TMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAYNSALYPNFSVAMTSPRG 152
Query: 526 LAVVGFLLE 552
L V +++
Sbjct: 153 LLAVSVIVD 161
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 286 LNNGSTAYFTFNDASVRPT--LSGGPLIG-EYIFEQMHFHWSVDDFTGCEHVLDGHGYAA 456
+N G +S +P+ ++ GPL G Y +++ FH + G EH ++G +
Sbjct: 152 VNTGQMVRVRIGYSSKKPSVNITSGPLYGYRYRVQRIDFHMGRKNENGSEHTINGRRFPM 211
Query: 457 ECHFVHYNSK-YESLETAVGHPDGLAVVGFLLE 552
E V YN+ Y + +A P G+A++ L++
Sbjct: 212 EVQLVAYNTDLYPNFTSASKSPHGIAILSVLVD 244
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 605 PSRPCTSLSNLGLGASTVSRRNPTTANPSGWPTAVSKDS 489
P+ PC+ ++ + T ++NP T NP G AVS+ S
Sbjct: 794 PTAPCSFMTCQLIVYKTSEKKNPVTNNPCGGQNAVSRPS 832
>Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 401 DQWKCICSKMYSPIR--GPPLRVGLTDASLNVKYAVDPLF 288
DQW S MY+P+R G GL S+N + PLF
Sbjct: 140 DQWFVNDSAMYNPLRFEGDIANSGLNSRSINTFFGDSPLF 179
>Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 401 DQWKCICSKMYSPIR--GPPLRVGLTDASLNVKYAVDPLF 288
DQW S MY+P+R G GL S+N + PLF
Sbjct: 140 DQWFVNDSAMYNPLRFEGDIANSGLNSRSINTFFGDSPLF 179
>U88168-1|AAC24403.2| 376|Caenorhabditis elegans Hypothetical
protein K11H12.9 protein.
Length = 376
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 NRTVKIDPKFLSAQPKKTSSDAEHISRLR-PSQSPIAISLSRCPTWSSLDPLKFKG 255
N + P L P KTS D ISR S S + S S+ +WS D + G
Sbjct: 37 NDDISSIPDSLEHSPAKTSDDGSEISRANFSSPSSPSRSPSKKVSWSLFDQVSLSG 92
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/118 (22%), Positives = 46/118 (38%)
Frame = +1
Query: 235 DPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDF 414
D ++ K + N N +L+ G++ Y A++ +S IG + + + DD
Sbjct: 819 DKVRQKNKYRPNCNVVLVGYGASTYLIHRAANLVEGISAIISIGFPVMTSLGRRGTADDE 878
Query: 415 TGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRL 588
+ AE + N L T++ P GL VVG + + P RL
Sbjct: 879 ILLTYCPTLFIVGAEGRRFN-NEAITELRTSMISPSGLVVVGHSNDMILVPTSMLLRL 935
>Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical
protein F40F8.11 protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 461 HSAAYPWPSSTCSHPVKSSTDQW--KCICSKMYSPI 360
+S +YPW ++ SH S D W + Y+P+
Sbjct: 3 YSGSYPWNNNYYSHGQSSGNDSWAPSAQSQEQYNPV 38
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 27.9 bits (59), Expect = 5.9
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 355 PLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAV 534
P+IGE + Q+ + VL HG AE HY K + E + D V
Sbjct: 85 PVIGELLKTQVKSGGLIGAICAGPTVLLAHGIVAERVTCHYTVKDKMTEGGYKYLDDNVV 144
Query: 535 VGFLLETVDAPNPRFD---RLVQGLE 603
+ + T P F+ ++V+ LE
Sbjct: 145 ISDRVITSKGPGTAFEFALKIVETLE 170
>Z75538-2|CAA99840.1| 476|Caenorhabditis elegans Hypothetical
protein F20G4.2 protein.
Length = 476
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 232 AKTKSDTGSMI*QSVIVKVLILKCARHQKKFS 137
++ K+ T SM +I V+ LK ARH KFS
Sbjct: 103 SEIKTPTSSMAKIRIITPVIPLKIARHPTKFS 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,899
Number of Sequences: 27780
Number of extensions: 315136
Number of successful extensions: 1126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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