Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n08f
(605 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 36 0.016
At2g28100.1 68415.m03413 glycosyl hydrolase family 29 / alpha-L-... 35 0.048
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 31 0.59
At4g17240.1 68417.m02592 expressed protein 30 1.4
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 30 1.4
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 30 1.4
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 29 1.8
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 29 1.8
At3g19870.1 68416.m02516 expressed protein 29 1.8
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 29 1.8
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 29 3.2
At5g22760.1 68418.m02658 PHD finger family protein contains Pfam... 28 4.2
At4g39450.1 68417.m05582 expressed protein 28 4.2
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 28 4.2
At5g49110.1 68418.m06079 expressed protein ; expression support... 28 5.5
At5g59670.1 68418.m07481 leucine-rich repeat protein kinase, put... 27 7.3
At3g26820.1 68416.m03355 esterase/lipase/thioesterase family pro... 27 7.3
At1g07910.1 68414.m00860 expressed protein identical to GB:AAB07... 27 7.3
At4g20910.1 68417.m03031 double-stranded RNA binding protein-rel... 27 9.6
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664... 27 9.6
At2g01990.1 68415.m00134 expressed protein 27 9.6
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 27 9.6
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 36.3 bits (80), Expect = 0.016
Identities = 31/97 (31%), Positives = 43/97 (44%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI + R S L L + Y SNA L N G F D + ++G
Sbjct: 69 QSPIDLMNERVNIVSHLGRLN-RDYNPSNAT--LKNRGHDIMLKFEDGAGTIKINGF--- 122
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
EY +Q+H+H + EH ++G +A E H VH
Sbjct: 123 -EYELQQLHWH------SPSEHTINGRRFALELHMVH 152
>At2g28100.1 68415.m03413 glycosyl hydrolase family 29 /
alpha-L-fucosidase, putative similar to
alpha-L-fucosidase SP:P10901 from [Dictyostelium
discoideum]
Length = 506
Score = 34.7 bits (76), Expect = 0.048
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 581 SNLGLGASTVSRRNPTTANPSGWPTAVSKDSYL--LL*WTKWHSAAYPWPSSTCSHPVKS 408
S G G + S NPT N S W ++KDS ++ K H WPS + VKS
Sbjct: 64 SEWGTGKANPSIFNPTHLNASQW-VQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVKS 122
Query: 407 STDQWK 390
S QW+
Sbjct: 123 S--QWR 126
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 274 NAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYA 453
NA L N G F + G EY Q+H+H + EH ++G +A
Sbjct: 67 NATLKNRGHDMMLKFGEEGSGSITVNGT---EYKLLQLHWH------SPSEHTMNGRRFA 117
Query: 454 AECHFVHYN 480
E H VH N
Sbjct: 118 LELHMVHEN 126
>At4g17240.1 68417.m02592 expressed protein
Length = 200
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 448 YAAE-CHFVHYNSKYESLETAVGHPDGLAV 534
Y +E C++ S Y+SLE + G PDGLA+
Sbjct: 96 YLSESCYWQAQTSSYDSLEFSSGSPDGLAL 125
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1
Query: 370 YIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
Y QMH+H T EH L G YAAE H VH
Sbjct: 113 YTLLQMHWH------TPSEHHLHGVQYAAELHMVH 141
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1
Query: 370 YIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
Y QMH+H T EH L G YAAE H VH
Sbjct: 113 YTLLQMHWH------TPSEHHLHGVQYAAELHMVH 141
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 160 HISRLRPSQSPIAISLSRCPTWSSLDPLKFKGY 258
H+ RL S+S +A RC WS LD L + Y
Sbjct: 249 HLERLSSSKSVLASKCLRCIDWSLLDVLTWPVY 281
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 160 HISRLRPSQSPIAISLSRCPTWSSLDPLKFKGY 258
H+ RL S+S +A RC WS LD L + Y
Sbjct: 249 HLERLSSSKSVLASKCLRCIDWSLLDVLTWPVY 281
>At3g19870.1 68416.m02516 expressed protein
Length = 1117
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 436 DGHGYAAECHFVHYNSKYESLET-AVGHPDGLAVVGFLLETVDAPNPRFDRLVQGL 600
DG E V + S S+++ +VGH + AVV LL V+ PN FDR + +
Sbjct: 102 DGSSGLKEQAMVSFTSVLVSIDSFSVGHVE--AVVDLLLALVNRPNHGFDRQARAI 155
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 29.5 bits (63), Expect = 1.8
Identities = 28/97 (28%), Positives = 44/97 (45%)
Frame = +1
Query: 184 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 363
QSPI ++ R +L L+ + Y SNA + F +A + T++G
Sbjct: 50 QSPIDLTDKRVLIDHNLGYLRSQ-YLPSNATIKNRGHDIMMKFEGGNAGLGITINGT--- 105
Query: 364 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVH 474
EY +Q+H+H + EH L+G + E H VH
Sbjct: 106 -EYKLQQIHWH------SPSEHTLNGKRFVLEEHMVH 135
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/82 (31%), Positives = 38/82 (46%)
Frame = +1
Query: 346 SGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDG 525
+G +I + ++ + HW EH LDG A E H VH +S+E GH
Sbjct: 101 AGKIVINDTDYKLVQSHWHAPS----EHFLDGQRLAMELHMVH-----KSVE---GH--- 145
Query: 526 LAVVGFLLETVDAPNPRFDRLV 591
LAV+G L + PN R++
Sbjct: 146 LAVIGVLFREGE-PNAFISRIM 166
>At5g22760.1 68418.m02658 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1566
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +1
Query: 160 HISRLRPSQSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRP 339
H+ RL S +A RC WS LD L + Y A+ +G F FN+ V
Sbjct: 243 HLERLSSEGSEVASKCLRCIDWSLLDALTWPVYLVQYFAAMGHASGPLWRF-FNEFVVEK 301
Query: 340 TLSGGPLI 363
P++
Sbjct: 302 EYCSSPVV 309
>At4g39450.1 68417.m05582 expressed protein
Length = 1553
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +1
Query: 220 TWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHW 399
T+ L L F GY LL+ G + +D + +S +I ++I E++H
Sbjct: 7 TFGPLGWLSFSGY---PTGEYLLHRGVEFFINVDDPTEISAISWEAIIQKHIEEELHHTK 63
Query: 400 SVDDFTGCEHVLD-GHGYAAECHFVHYNSKYESLETAVG 513
+ G EH L G AA F+ + + LE G
Sbjct: 64 TEGTELGLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSG 102
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 DSNANAILLNNGSTAYFTFNDASVRPTLSGGPL--IGEYIFEQMHFHWSVDDFTGCEHVL 435
D N +L+ S+ TFND ++ P +GE + H +S D F+ + ++
Sbjct: 382 DENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAIM 441
Query: 436 DGH-GYAAECHFVHYNS 483
+G G E + +N+
Sbjct: 442 EGSLGMDLEARYPPWNN 458
>At5g49110.1 68418.m06079 expressed protein ; expression supported by
MPSS
Length = 1487
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -1
Query: 353 PPLRVGLTDASLNVKYAVDPLFKSMALALLS-QYPLNLRGSSEDQVGHRLNDIAIGDCEG 177
PPL G T+ + VD + + LALLS + LN+ S G + +A+ E
Sbjct: 941 PPLATGQTNKEKKGRKDVDGRKQCLHLALLSLKELLNIYSSGSGLTGLLEDLLAVPASED 1000
Query: 176 LNLEMCSASEEV 141
LE C + ++
Sbjct: 1001 ATLEECREASKI 1012
>At5g59670.1 68418.m07481 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 868
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -1
Query: 335 LTDASLNVKYAVDPLFKSMALALLSQYPLNLRGSSEDQVGHRLNDIAIGDCEGLN 171
+ D +L Y ++ ++++ LA+ YP + + S QV H L + + G++
Sbjct: 791 IMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHELKECIACENTGIS 845
>At3g26820.1 68416.m03355 esterase/lipase/thioesterase family
protein contains Interpro entry IPR000379
Length = 634
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 495 LGDGGGPSRWIGCGRIPPGDCRRSQP 572
+GDGGGP RW P +CR P
Sbjct: 65 VGDGGGPPRWFS-----PLECRAQAP 85
>At1g07910.1 68414.m00860 expressed protein identical to GB:AAB07881
AT.I.24-9 gene product from [Arabidopsis thaliana] (Mol.
Gen. Genet. 219 (1-2), 106-112 (1989))
Length = 1081
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 474 VDEVAFCGVPVAIEHVLASGEVIYGPV 394
+DEVA VP + +HV GE++ G V
Sbjct: 280 LDEVADISVPASKDHVKVQGEILEGLV 306
>At4g20910.1 68417.m03031 double-stranded RNA binding
protein-related / DsRBD protein-related contains weak
similarity to Pfam profile PF00035: Double-stranded RNA
binding motif
Length = 942
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +1
Query: 85 MDNRTVKIDPKFLSAQPKKTSSDAEHISRLRPSQSPIAISLSR--CPTWSSLDPLKFKGY 258
+D V++D ++S+ S AE + +Q I+ + C + L K Y
Sbjct: 227 IDEEVVELDTLYISSNRHYLDSIAERLGLKDGNQVMISRMFGKASCGSECRLYSEIPKKY 286
Query: 259 WDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDD 411
D++++A +N +++ + + + G + G+ I + + W DD
Sbjct: 287 LDNSSDASGTSNEDSSHIVKSRNARASYICGQDIHGDAILASVGYRWKSDD 337
>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
Protein of unknown function (DUF810)
Length = 985
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 440 PSSTCSHPVKSSTDQWKCICSKMYSPIRGPPLRVGLTDASLNVKYAVDPLFKSMALA 270
PS+ ++ K T K + P+ PPLR GL+D L + A + + SM L+
Sbjct: 131 PSARDNYVFKEETPDIKPVKPIKIIPLGLPPLRTGLSDDDLR-EAAYELMIASMLLS 186
>At2g01990.1 68415.m00134 expressed protein
Length = 221
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 435 EHVLASGEVIYGPVEVHLLEDVLSDQGAPAEGR 337
EH+ S E+ Y V LED L + G ++ R
Sbjct: 14 EHIFGSPEIDYSDVSTGYLEDALIESGERSKRR 46
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 571 GWERRQSPGGIRPQPIHRDGPPPSP 497
G++++ PGG+RP P G PP P
Sbjct: 533 GFQQQPHPGGLRP-PAGPKGKPPRP 556
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,430,565
Number of Sequences: 28952
Number of extensions: 293521
Number of successful extensions: 1016
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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