Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n04f
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 74 9e-14
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 73 2e-13
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 69 4e-12
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 60 2e-09
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 55 4e-08
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 52 3e-07
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 52 3e-07
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 48 5e-06
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 44 1e-04
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 43 3e-04
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 41 0.001
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 40 0.001
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 40 0.001
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 40 0.001
SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014) 40 0.002
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 39 0.004
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 38 0.005
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 36 0.029
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 36 0.039
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 35 0.051
SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 33 0.21
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 33 0.27
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 33 0.27
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 31 0.83
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 31 1.1
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 29 2.5
SB_12783| Best HMM Match : Pep_M12B_propep (HMM E-Value=6.3e-12) 29 2.5
SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38) 29 3.4
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 29 3.4
SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19) 29 3.4
SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3) 29 3.4
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 28 5.9
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 28 5.9
SB_41434| Best HMM Match : Keratin_B2 (HMM E-Value=1.8) 28 5.9
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 28 5.9
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 28 7.7
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 74.1 bits (174), Expect = 9e-14
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Frame = +3
Query: 42 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSD 221
+KV+ ITGA+ GIG + R+ +G + A ++L +E+ ++ G + ++D
Sbjct: 7 EKVMLITGASRGIGAATARLAAAQGYALCLNYQRQQAAAEALVSEI-TQAGGRAIAVQAD 65
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITST 380
V DE + + + Q G +DV++NNA ++ + + +++ NV
Sbjct: 66 VADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCC 125
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI-YFATKSAVLQFSNCIGRPEHFSKT 557
+AI+ M GG GG ++N+SS AA + I Y A K A+ S +G + +
Sbjct: 126 REAIKRMSTRQGGNGGAIVNLSSAAARLGAPGEYIDYAAVKGAI--DSMTLGLAKEVAAD 183
Query: 558 GVRVLTVCLGATDTAL 605
G+RV V G +T +
Sbjct: 184 GIRVNAVRPGVIETEI 199
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Frame = +3
Query: 48 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYG-NKTKFYRSDV 224
V +TG GIG ++ + LLD K + +LDI E+ G L+ Y ++ F + DV
Sbjct: 7 VAIVTGGVQGIGLAISKALLDRDGK-VCMLDINEKTGNETLKLLSENYSKHRVLFIKCDV 65
Query: 225 TDEEHFLGILNAVVQEQGGIDVVINNAALM---NDSI--GIYKKAIEVNVTALITSTLKA 389
T + G +D++ NNA + ND + G +K I++NV +I TL
Sbjct: 66 TSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVILGTLLG 125
Query: 390 IEIMGKHSG-GKGGTVINVSSVAALTQ 467
++ MG G GGT++NV+S+A Q
Sbjct: 126 LDHMGVSGAKGHGGTIVNVASLAESIQ 152
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 224
+V +TG A+GIG++ V L EG +AILDI +E GQ ++ +L S GNK KFY DV
Sbjct: 25 RVAIVTGGASGIGKATVERLAREGAS-VAILDINDELGQQVETDLRSS-GNKVKFYHVDV 82
Query: 225 TDEEHFLGILNAVVQEQG-GIDVVINNAA 308
+++ ++ V + G + +++NNAA
Sbjct: 83 ANKDMCAHVVGCVAADHGSAVHILVNNAA 111
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 68.5 bits (160), Expect = 4e-12
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Frame = +3
Query: 39 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 218
+ + V ITGAA+GIG IL +G K + + DI EA +++ E+ G +T ++
Sbjct: 34 RGETVLITGAASGIGRLTALILAKKGCK-LVLWDINLEALKAVAQEIQD-LGAETHYFEC 91
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTALITST 380
DV ++ + NAV + G + ++INNA + +N S + +VN A I +
Sbjct: 92 DVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTI 151
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEH-FSKT 557
+ I M + + G +++++SVA Y A+K A + + R H K
Sbjct: 152 QRFIPSMMEKNRGH---IVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREIHGLGKM 208
Query: 558 GVRVLTVCLGATDTALLTDEKL 623
G+ T+C T T + KL
Sbjct: 209 GIEFTTICPHFTATGMFAGVKL 230
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQ--SLQAELNSKYGNKTKFYRS 218
KV ITG ++GIG + IL +G K + + SL++ + G+
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIREL 63
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEI 398
DV+ ++ LNA+ +E+G ID+++NNA + + IG+ + + V + +
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISH--IGMLETQTQSLVKETFNTNFFGVLR 121
Query: 399 MGK-----HSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 509
M K G +IN+SS A T +Y A+K AV
Sbjct: 122 MSKAVIPRMKSDHSGHIINISSTAGHTGMPFTGLYCASKFAV 163
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 55.2 bits (127), Expect = 4e-08
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHI------AILDIAEEAGQSLQAELNSKYGNKTK 206
+V +ITGA++GIGE++ L G K + + L+ +E ++ E N+ Y
Sbjct: 43 RVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQD 102
Query: 207 FY--RSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITST 380
DVT+ + ++ +V+ ID++INN+ + + IEV L +
Sbjct: 103 ILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNF 162
Query: 381 LKAIE----IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHF 548
L + ++ K G ++ SSVA + + Y ATK AV + + + R E F
Sbjct: 163 LAVVSLTKAVLPHMIERKNGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGL-RVELF 221
Query: 549 SKTGVRVLTVCLGATDTAL 605
K + V VC G TA+
Sbjct: 222 PK-NIHVTLVCPGPVRTAI 239
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQ--SLQAELNSKYGNKTKFYRS 218
+VV +TG ++GIG ++ +L + K + G+ +L + + +
Sbjct: 35 RVVVVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLGKKDALLEKCSGVVEDLLNIKEL 94
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTALITST 380
DV +E ++ +V+++G IDV++NNA + + K E NV L+ T
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 509
I M K + G V+N+ SV + + IY A+K AV
Sbjct: 155 NAVIPHMKKQ---RAGHVVNIGSVLGIVGTPFSEIYCASKFAV 194
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Frame = +3
Query: 48 VVFITGAATGIGESVVRILL-DEG--VKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 218
+V ITG +TGIG + +L D+G K A + E+ G L+ + G+ +
Sbjct: 198 IVLITGCSTGIGLAAALLLAKDDGRRFKVYATMRNLEKRG-ILEEAARRQLGDTLIVKQL 256
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNA------ALMNDSIGIYKKAIEVNVTALITST 380
DVT +E +L ++ + IDV++NNA L ++ + ++ VN ++ T
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLT 316
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 509
KA ++ K G G +IN+ S+ + IY ++K AV
Sbjct: 317 -KA--VIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAV 356
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 52.8 bits (121), Expect = 2e-07
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 7/205 (3%)
Frame = +3
Query: 15 TLKMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYG 194
T + K+KVV ++ AA GIG++ EG K IA DI E EL+S G
Sbjct: 7 TKSLGDRLKNKVVVLSAAAQGIGKATALACAREGAKVIA-TDINAEK----LKELHSVPG 61
Query: 195 NKTKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAALM------NDSIGIYKKAIEVN 356
+T+ DVTD E + E +DV+ N A L+ S + +++N
Sbjct: 62 IETRVV--DVTDYE----AIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLN 115
Query: 357 VTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFAT-KSAVLQFSNCIG 533
V ++ T + I M + G++IN++SVA+ + + T K+AV+ F+ I
Sbjct: 116 VKSMFRMTKECIPKMRQQG---SGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIA 172
Query: 534 RPEHFSKTGVRVLTVCLGATDTALL 608
++ +K G+RV VC G T L
Sbjct: 173 -ADYITK-GIRVNAVCPGTIYTESL 195
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 52.4 bits (120), Expect = 3e-07
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Frame = +3
Query: 48 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVT 227
V I G A+GIG + L+ G + + I+D+ GQ+ E +G+ F V
Sbjct: 290 VALIAGGASGIGRATAIRLIRAGARAV-IVDLPSSEGQNTAQE----FGSHCTFIPGHVD 344
Query: 228 DEEHFLGILNAVVQEQGGIDVVINNAAL------MNDS-----IGIYKKAIEVNVTALIT 374
E + ++ G ++ IN AAL +++S + ++++ +++N
Sbjct: 345 SESEIKAAIKVAKEKYGCVNASINTAALNTKELTLSESGCPHPLELFEETMKINAVGTFN 404
Query: 375 STLKAIEIMGKHSG---GKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEH 545
E M ++ G+ G ++NVSS+ Y ATK A+ + + R
Sbjct: 405 VARLVAESMATNTPDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLPMAR--D 462
Query: 546 FSKTGVRVLTVCLGATDTAL 605
+K G+RV T+ G +T +
Sbjct: 463 LAKLGIRVNTISPGIFNTPM 482
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 52.4 bits (120), Expect = 3e-07
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Frame = +3
Query: 42 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSD 221
D++V ITGA +GIG+ + G K I +DI ++A E+ K Y+ D
Sbjct: 53 DEIVLITGAGSGIGKGMAIEFAKIGAK-IVCVDINKQANDQ-TVEVIKSLNQKAFGYKCD 110
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTA------ 365
+ E + + V +E G + +++NNA + ++ + +K +EVN A
Sbjct: 111 CSSREDIYRVADIVKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILA 170
Query: 366 ----LITSTLKAIE-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
I TL+ ++ + G V+N++S A M Y ++K + F +
Sbjct: 171 LNPDYIVFTLQTVKSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESL 230
Query: 531 GRP-EHFSKTGVRVLTVC 581
KTGV+ VC
Sbjct: 231 RMELSSLGKTGVKTTVVC 248
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 48.4 bits (110), Expect = 5e-06
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKY---GNKTKFYR 215
K+V ITG +TG+G ++ + +G H ++ A + AE+N KY G +FY
Sbjct: 3 KIVAITGVSTGLGLALTKWFSSQG--H-TVVGCGRSAAKI--AEMNEKYCGKGKPNQFYV 57
Query: 216 SDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYK-------KAIEVNVTALIT 374
D+TD+ V + G D V+NNA +N + +++ K ++VN+
Sbjct: 58 VDITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSAN 117
Query: 375 STLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATK 500
+ M K GK G ++N SS M Y ATK
Sbjct: 118 VIRSFLPKMIK--AGK-GVIVNFSSGYGKAGKAKMAPYCATK 156
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/86 (27%), Positives = 49/86 (56%)
Frame = +3
Query: 57 ITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTDEE 236
+TG GIG VV+ L+ + +I + ++E G++ LN G + ++++ DVT +
Sbjct: 28 VTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLN--VGGRVEYHKLDVTSND 85
Query: 237 HFLGILNAVVQEQGGIDVVINNAALM 314
+ V ++ GG+D+++NNA ++
Sbjct: 86 SIHELTLHVQEKYGGLDILVNNAGIL 111
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/90 (28%), Positives = 50/90 (55%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 224
+V +TGA++GIG +V + L + GVK +A+ EE L+ E+ + G+ ++DV
Sbjct: 105 QVAIVTGASSGIGAAVAKALAEAGVK-VALAARREERLTQLRDEIIAN-GDVAISVKTDV 162
Query: 225 TDEEHFLGILNAVVQEQGGIDVVINNAALM 314
T +E ++ G +D++++ A +M
Sbjct: 163 TIKEQMESLVKRTDSTLGPVDILVSCAGVM 192
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +3
Query: 279 GIDVVINNAALMNDS------IGIYKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVIN 440
G+ V NNA M + + YK+ +VN+ L+ T + ++ K + G+ V+N
Sbjct: 20 GLWAVYNNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLPLV-KMARGR---VVN 75
Query: 441 VSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRVLTVCLGATDTALLTDEK 620
VSS+A + M Y TK V FS+ + R S GVRV+ + G T L ++K
Sbjct: 76 VSSIAGIVVVPSMAAYSITKYGVEAFSDALRR--EMSPWGVRVIIIEPGGFKTPLWDEQK 133
Query: 621 L 623
+
Sbjct: 134 I 134
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 42.7 bits (96), Expect = 3e-04
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +3
Query: 246 GILNAVVQEQG-GIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIMGKHS--- 413
G LNA V G GI V + ++ +++K ++VN T E M K+
Sbjct: 90 GPLNAAVNCAGIGIAVKTLSKTGEAHALDLFEKVLKVNTTGSFNVIRLVAEQMIKNEPTE 149
Query: 414 GGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRVLTVCLGAT 593
GG+ G + N +SVAA Y A+K ++ + I R ++ G+RV T+ G
Sbjct: 150 GGERGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIAR--DLARNGIRVNTIAPGLF 207
Query: 594 DTALL 608
T LL
Sbjct: 208 LTPLL 212
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/97 (34%), Positives = 45/97 (46%)
Frame = +3
Query: 333 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 512
YKK +VN+ LI TL + ++ K GG V+N+SS+A Y TK V
Sbjct: 13 YKKMADVNLWGLIDVTLTFLPLIRK----CGGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 513 QFSNCIGRPEHFSKTGVRVLTVCLGATDTALLTDEKL 623
FS+ + R S GV+V V G T L + L
Sbjct: 69 AFSDALRR--EVSPWGVKVTLVEPGGFHTRFLAEGAL 103
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 40.7 bits (91), Expect = 0.001
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Frame = +3
Query: 33 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFY 212
++ +K V +TG +G G +V I LD H+ + + + +L +T
Sbjct: 383 DYHNKYVLVTGCDSGFGRDLV-IRLDGMGFHVFGACLTQPG----KRDLEQTCSKRTVGL 437
Query: 213 RSDVTDEEHFLGILNAV--VQEQG-GIDVVINNAALMNDS------IGIYKKAIEVNVTA 365
DVT E + V V G G+ V NNA M + + YK+ +VN+
Sbjct: 438 LMDVTSHEQIIEAFEQVKRVLPSGTGLWAVYNNAGYMTLAPLEWFPLDDYKRMADVNLWG 497
Query: 366 LITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEH 545
L+ + + ++ K + G+ V+NV+S L + + Y TK V FS+ + R E
Sbjct: 498 LVDVSKTFLPLV-KMARGR---VVNVASTVGLIANELTAPYSITKYGVEAFSDVL-RREM 552
Query: 546 FSKTGVRVLTVCLGATDTALLTD 614
F GVRV + A T L D
Sbjct: 553 F-PWGVRVSIIEPQAFKTPLWDD 574
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +3
Query: 333 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 512
YK+ +VN+ L+ T + ++ K + G+ V+NVSS+ L + + Y TK V
Sbjct: 14 YKRMADVNLWGLVDVTKTFLPLV-KMARGR---VVNVSSIVGLIANELTAPYSITKYGVE 69
Query: 513 QFSNCIGRPEHFSKTGVRV 569
FS+ + R GVRV
Sbjct: 70 AFSDVLRR--EMLPWGVRV 86
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 126 IAILDIAEEAGQSLQAELNSKYGN-KTKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINN 302
+ ++D+ ++AG + L +K+G+ F DV++++ V G +D+V NN
Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGHLDIVFNN 83
Query: 303 AALMNDSIGIYKKAIEVNV 359
A ++++ + K ++VN+
Sbjct: 84 AGILDEE--RWSKTLDVNL 100
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Frame = +3
Query: 57 ITGAATGIGESVVRILLDEGVK-HIAILDIAEEAGQSLQAELNSKYGNKTKF-YRSDVTD 230
ITGA +GIG+ R L G H+ D E+ G+ + EL + GN+ + + D++
Sbjct: 48 ITGANSGIGKETARALAKSGATVHMVCRD--EQRGEQARQELLQESGNQNIYLHVLDMSQ 105
Query: 231 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-VTALITSTLKAIEIMGK 407
+ + V++NNA M ++ I + +E+N T + + + E++
Sbjct: 106 PSNVCKFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMNFATNTLGTYILTKELLPC 165
Query: 408 HSGGKGGTVINVSS 449
+ + VI VSS
Sbjct: 166 LTSQESPRVITVSS 179
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Frame = +3
Query: 42 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSD 221
DK V ITG+++G+G I LD+ H+ + SL+ + + +
Sbjct: 41 DKFVLITGSSSGMGRETA-IALDKLGFHVLATCRTRKGEDSLRLDCSERMRTYVMDVSDT 99
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNAALMN------DSIGIYKKAIEVNVTALITSTL 383
V+ + IL + EQ G+ ++NNA ++ S+ K+ +VN+ LI T
Sbjct: 100 VSVRSVYQQILQLLESEQQGLWGLVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTK 159
Query: 384 KAIEIMGKHSG 416
+ ++ K G
Sbjct: 160 TFLPLLKKAKG 170
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Frame = +3
Query: 57 ITGAATGIGESVVRILLDEGVK-HIAILDIAEEAGQSLQAELNSKYGNKTKF-YRSDVTD 230
ITGA +GIG+ R L G H+ D E+ G+ + EL + GN+ + + D++
Sbjct: 48 ITGANSGIGKETARALAKSGATVHMVCRD--EQRGEQARQELLQESGNQNIYLHVLDMSQ 105
Query: 231 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-VTALITSTLKAIEIMGK 407
+ + V++NNA M ++ I + +E+N T + + + E++
Sbjct: 106 PSNVCKFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMNFATNTLGTYILTKELLPC 165
Query: 408 HSGGKGGTVINVSS 449
+ + VI VSS
Sbjct: 166 LTSQESPRVITVSS 179
>SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014)
Length = 268
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +3
Query: 9 YGTLKMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSK 188
Y ++MS ++ +TG GIG ++ L G I + +E + ++EL SK
Sbjct: 70 YVCIEMSKALSNRYALVTGGTRGIGLAISHKLAKNGYYLILGYNANDERAEKAKSELESK 129
Query: 189 YGNKTKFYRSDVTDEEHFLGILNAV-VQEQGGIDVVINNAALMNDSIGIYKKAI-EVNVT 362
Y + + DV ++ ++ ++ ++NA L +G+ A E ++T
Sbjct: 130 YNVRVFTVKGDVAEDSTINAFFESIKANFDNKLNAFVHNAGL---QVGLTTDATSEASIT 186
Query: 363 AL 368
AL
Sbjct: 187 AL 188
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 102 LLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTDEEHFLGILNAVVQEQGG 281
LL +G A + + +E G A +G + + + D+ + L ++Q G
Sbjct: 57 LLLQGQWLDASIQLTDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGR 116
Query: 282 IDVVINNAALMND------SIGIYKKAIEVNVT-ALITSTLKAIEIMGKHSGGKGGTVIN 440
IDV++NNA M + ++K V+V A + S + A +++ + G+GG +IN
Sbjct: 117 IDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQ---GQGGRIIN 173
Query: 441 VSSVAALTQSHVMPIYFATKSAV 509
++SV T Y A K A+
Sbjct: 174 ITSVHEHTPLPDASAYTAAKHAL 196
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +3
Query: 48 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVT 227
V +TGAA +G +VR L G + + + + E + + E+NS + ++D++
Sbjct: 14 VALVTGAAKRLGAGIVRALHGSGFRVVIHYNNSGEDAEKIVQEMNSVRSDSAIMLKADLS 73
Query: 228 D--EEHFLGILNAVVQEQGGIDVVINNAA 308
+E ++ V G +D+++NNA+
Sbjct: 74 TNIQETARKLIEDTVTAFGQLDLLVNNAS 102
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +3
Query: 39 KDKVVFITGAATGIGESVVRILLDEGVKHI-AILDIAEEAGQSLQAELNSKYGN-KTKFY 212
K K V ITGA +GIG V R L + I A D+ G AE+ GN +
Sbjct: 71 KGKTVIITGANSGIGMEVARDLAWRKARVIMACRDV--HKGMKAAAEIVQSAGNMDVEVK 128
Query: 213 RSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIE 350
+ D+ V +E+ +DV+INNA +G KK ++
Sbjct: 129 KLDLASFASIREFAKEVNEEESRVDVLINNAGY----LGSQKKTVD 170
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 35.9 bits (79), Expect = 0.029
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEA---GQSLQA------ELNSKYGN 197
+VV +TGA G+G + G + + D+ + G+S +A E+ +K G
Sbjct: 11 RVVLVTGAGNGLGRQYALAFAERGAS-VVVNDLGGDTKGEGKSGRAADKVVQEIRAKGGK 69
Query: 198 KTKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIE---VNVTAL 368
Y S ++ ++ ++ G IDVV+NNA ++ D + ++ V L
Sbjct: 70 AVADYNSVEQGDQ----VVETAIKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHL 125
Query: 369 ITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR 536
S L K G +I +S + + + Y A K ++ SN + +
Sbjct: 126 KGSFLVTRAAWPHMKKQKFGRIIMTTSTSGIYGNFGQANYSAAKLGLVGLSNTLAQ 181
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 35.5 bits (78), Expect = 0.039
Identities = 30/96 (31%), Positives = 44/96 (45%)
Frame = +3
Query: 333 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 512
YK+ EVN+ + T + ++ + G V+N+SSVA + Y +K V
Sbjct: 61 YKQIAEVNLWGTVRMTKAFLPLLKREKG----RVVNISSVAGMVPLQRSSAYCISKFGVS 116
Query: 513 QFSNCIGRPEHFSKTGVRVLTVCLGATDTALLTDEK 620
FS+ + R S GV V+ V GA T TD K
Sbjct: 117 VFSDALRR--EMSPWGVGVVLVEPGAFKTQ-ATDPK 149
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 35.1 bits (77), Expect = 0.051
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 39 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTK--FY 212
+ ++ +TG +GIG +V L + G ++++D+ G +E + + + T+ +
Sbjct: 192 RGRLALVTGGGSGIGRAVCEALANRGAS-VSVIDL-HGVGAKETSENLATHNDTTRHTHF 249
Query: 213 RSDVTDEEHFLGILNAVVQE-QGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKA 389
+V +L A+ +E Q +++N+A + D++ + K E + +I LK
Sbjct: 250 AVNVASSSEVKDLLQAIHKEYQRAPCILVNSAGIAKDALLLKMK--EQDFDDVIDVNLKH 307
Query: 390 IEIMG 404
+ ++G
Sbjct: 308 VRVIG 312
>SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/138 (18%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Frame = +3
Query: 21 KMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEE--AGQSLQAELNSKYG 194
+ + + +VV +TG ++GIG ++ +L + K + +L + + G
Sbjct: 29 EFTEDKSQRVVLVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLVKKDALLEKCSGVVG 88
Query: 195 NKTKFYRSDVTDEEHFLGILNAVVQEQGGIDVV---INNAALMNDSIGIYK--KAIEVNV 359
+ DV +E ++ +V+++G IDV+ + + ND I K + +
Sbjct: 89 DLLNIKELDVCSDESVKAVVAEIVEKEGRIDVLGRHLKTPSTSNDVISALKLDQGRHLKT 148
Query: 360 TALITSTLKAIEI-MGKH 410
+ + A+++ +G+H
Sbjct: 149 PSTSNDVISALKLDLGRH 166
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHI---AILDIAEEAGQSLQAELNSKYGNKTKFYR 215
K V ITGA TGIG+ L G + I LD A + +QA S+
Sbjct: 38 KTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEHLDL 97
Query: 216 SDVTDEEHFLGILNAVVQEQGGIDVVINNAAL 311
+ ++ F ++N +++ +D+++NNA +
Sbjct: 98 ASLSSVRKFAEVIN---KKEERVDILMNNAGV 126
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 33.1 bits (72), Expect = 0.21
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 9/176 (5%)
Frame = +3
Query: 36 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYR 215
+ +K V ITG TG G I L++ ++ + ++ +SL+ + G F
Sbjct: 31 YNNKYVLITGCDTGFGRDTA-IRLNQMGFNVFGACLTDKGMKSLKEACS---GRLVAFL- 85
Query: 216 SDVTDEEHF---LGILNAVVQEQGGIDVVINNAALMN------DSIGIYKKAIEVNVTAL 368
DVT E + + + G+ + NNA M ++ YK ++N+ L
Sbjct: 86 MDVTKHEQIEAAYAKVKSCLPPDTGLWALDNNAGYMGLGPLEWFTMDDYKMQADINLWGL 145
Query: 369 ITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR 536
I T + ++ K + G+ V+N SS+A + + Y TK V FS+ + R
Sbjct: 146 IDVTKTFLPLI-KVAKGR---VVNFSSIAGVATPALRAAYSVTKYGVESFSDALRR 197
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Frame = -2
Query: 439 LITVPPLPPLCFPIISMAFNVLVIKAVTLTSMAFL*MPILSFMRAALLITTSMPPCS*TT 260
++T PLPP P ++ +L++ LTS +P L+ L++TTS P
Sbjct: 8 MVTTSPLPPPTIPFLAATTPLLMVTTSPLTSPT---IPFLATTTPLLMVTTSPLPSPTIP 64
Query: 259 ALRIPRKCSSSVTSDL*NFVLLPYFEFSSACNDCPASSAMSKIAICLTPSSNNILTTDSP 80
L TS L +P+ ++ S S L ++ ++ T SP
Sbjct: 65 FLATTTPLLMVTTSTL-PPPTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSP 123
Query: 79 MP-VAAPVIKTT 47
+P P + TT
Sbjct: 124 LPSPTIPFLATT 135
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 32.7 bits (71), Expect = 0.27
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Frame = +3
Query: 234 EHFLGILNAVVQEQGGIDVVINNAA------LMNDSIGIYKKAIEVNVTALITSTLKAIE 395
E + V E G +D+++NNA L++ + +KAIE+N+ A ++
Sbjct: 1284 EEIYATASRVKGEVGDVDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSR---S 1340
Query: 396 IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEH-FSKTGVRVL 572
+G+ G ++ +SSV+ + Y A+K + F + + + K GV+
Sbjct: 1341 FLGRMLEQNQGHIVTISSVSGSFPTAFQVEYCASKYGAVGFHDALSHELYTLGKDGVKTT 1400
Query: 573 TV 578
V
Sbjct: 1401 LV 1402
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS-D 221
K V ITGA TGIG+ L G + + I + G + ++ S+ G++ F D
Sbjct: 38 KTVIITGATTGIGKETAVDLAKRGAR-VIIGARNLDRGNTAVRDIQSRSGSQQVFVEHLD 96
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNAAL 311
+ + ++ I ++INNA +
Sbjct: 97 LASLSSVRKFAEVMNNKEERIHILINNAGV 126
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHI-AILDIAEEAGQSLQAELNSKYGNKTKFYR-S 218
K V +TGA +GIG++ L G + I A D+ E+ + +E+ K R
Sbjct: 69 KTVIVTGANSGIGKATALELARRGARVIMACRDL--ESAEKAASEIRYKVPKAEVVCRFL 126
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNAAL 311
D+ V++E+ +D+++NNA +
Sbjct: 127 DLNSLISVRKFAEDVMREEKRLDILVNNAGV 157
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 30.7 bits (66), Expect = 1.1
Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 224
+VV ITG + G+G ++V+ G I ++ + + + K K +FY D+
Sbjct: 8 EVVVITGVSYGLGLAMVKWFNANGHTVIGCARSHDKIEKINEEFASGK--EKRQFYVVDI 65
Query: 225 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITSTL 383
+++E V+ + G ++INN+ + N + + K +++N+ T+ +
Sbjct: 66 SNDEAVKQWSQQVMLDFGAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKG--TANV 123
Query: 384 KAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR--PEHFS 551
+ + G ++N +S + + Y TK A+ S + PE+ +
Sbjct: 124 LRHFLPSMIEAKRKGVIVNFTSGWGRCVAPEVAPYCTTKWALEGLSKALAEELPEYLT 181
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNA--ALMNDSIGI----YKKAIEVNVTA-LITST 380
V D+ + + +++ Q D+++NNA A+ + I + + E NV A L +
Sbjct: 7 VCDDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIAQ 66
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHV 476
A +++ K G+GG ++NVSSV T+ H+
Sbjct: 67 AVAKKMVAK---GEGGAIVNVSSV--FTELHL 93
>SB_12783| Best HMM Match : Pep_M12B_propep (HMM E-Value=6.3e-12)
Length = 457
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 406 STAVVKEVQLSTFLRLPL*RNLTLCQYTSQLKALCCSSVIVSVD---RNTFRKPGSEY 570
S +V E S +LPL L C YT ++ SS I+SV R TF G EY
Sbjct: 134 SPGLVVEHVFSAGHKLPLDSGLAHCFYTGSIQGDSLSSAILSVCHGLRGTFFTGGQEY 191
>SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38)
Length = 451
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 51 VFITGAATGIGESVVRILLDEGVK 122
V +TG A +G S+V ILLD+G K
Sbjct: 143 VLVTGGAGYLGSSLVPILLDQGYK 166
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 282 IDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIM 401
ID++IN L+N S+ K AI + T+ ST I I+
Sbjct: 427 IDIIINTFILINSSVSSSKTAISSSTTSPPLSTFPIITII 466
>SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19)
Length = 1036
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 379 H*KPLR*WGSTAVVKEVQLSTFLRLPL*RNLTLCQYTSQLKALC 510
H KP + TA+ ++ L F R L RN+ LCQY +K +C
Sbjct: 279 HAKPKK---KTAITEKTSLVFFER-ELPRNVCLCQYHENIKLIC 318
>SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3)
Length = 166
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 282 IDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIM 401
ID++IN L+N S+ K AI + T+ ST I I+
Sbjct: 113 IDIIINTFILINSSVSSSKTAISSSTTSPPLSTFPIITII 152
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 96 RILLDEGVKHIAILDIAEEAGQSL 167
++L D+ KH AIL++AE AGQ L
Sbjct: 2279 QLLKDDIAKHNAILEMAENAGQQL 2302
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 252 LNAVVQEQGGID----VVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIMGKHSGG 419
+ A+ QG + V NNA + ++ A+E L T T K+ + + +G
Sbjct: 254 IEAICSGQGALSSLHSVQENNATSTDKTVTSKNTAVEKKRKTLTTQTDKSCKFLKNANGE 313
Query: 420 KGGTVINVSSVAALTQSHVMPI 485
K NVS+ LT V I
Sbjct: 314 KSSCTENVSANEVLTTQKVKEI 335
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +3
Query: 210 YRSDVTDE-EHFLGILNAVVQEQGGIDVV---------INNAALMNDSIGIYKKAIEVNV 359
Y++ VT E H +V Q G + + NN + + S+G+Y + +V
Sbjct: 177 YKNGVTSEPSHLCAKATSVTQPIGSVGIEPNQTTRSSSTNNGVMSSASVGVYSSREKTDV 236
Query: 360 TALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQS 470
TA +T+ A+ HS N SSV ++TQS
Sbjct: 237 TAYVTTYTPAL-----HSSLL--MKANPSSVTSVTQS 266
>SB_41434| Best HMM Match : Keratin_B2 (HMM E-Value=1.8)
Length = 381
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 169 CNDCPASSAMSKIAICLTPSSNNILTTDSPMPVAAPVIKTTLSFHSCDIF 20
C P+S + + +C+ P+S++ L + S P I T F S F
Sbjct: 323 CTIRPSSHRSTLVTLCIMPTSDSTLASCSASAQVCPTIFTIQPFSSIIFF 372
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 28.3 bits (60), Expect = 5.9
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHI-----------AILDIAEEAGQSLQAELN--- 182
KV +TG TGIG+++ LL G K + A +D+ + S AE+
Sbjct: 17 KVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLEKFIPPSSSAEVKVIP 76
Query: 183 ---SKYGNKTKFYRSDVTDEEHFLGILN---AVVQEQGGIDVVINNAA------LMNDSI 326
K T S ++ L + N + + G ID ++NN + N S
Sbjct: 77 CNIRKESQVTNLMESSMSSYYFSLKVTNLMKSTLSSYGRIDYLVNNGGGQFLCPVSNMSY 136
Query: 327 GIYKKAIEVNVTALITSTLKAIEI-MGKHSGGKGGTVINV 443
+ I+ N+ +A + M +H GG+++N+
Sbjct: 137 KGWNAVIDTNLNGTFLCCTEAYRLWMSEH----GGSIVNI 172
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNK 200
+VV +TGA++GIG + L G H+ + + ++ +AEL+ K NK
Sbjct: 46 RVVMVTGASSGIGLATASALAAHGA-HVVM--ACRDMEKAHKAELHIKKTNK 94
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAE 149
K VFITGA+ GIG+++ + +G + AE
Sbjct: 6 KTVFITGASRGIGKAIAVKVARDGANVVIAAKTAE 40
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 51 VFITGAATGIGESVVR--ILLDEGVKH-IAILDIAEEAGQSLQAELNSKYGNKTKFYRSD 221
VFITG + GIG V+ + L + KH IA +EA + + L + ++ D
Sbjct: 9 VFITGCSRGIGLEFVKQFVCLAKPPKHIIATSRKIDEASELYKLGL---IHDNLHVFQLD 65
Query: 222 VTDEEHFLGILNAV--VQEQGGIDVVINNAAL 311
VT E + + G+ ++INNA L
Sbjct: 66 VTSPESIREATEKATSILQGSGLSLLINNAGL 97
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNK 200
+VV +TGA++GIG + L G H+ + + ++ +AEL+ K NK
Sbjct: 94 RVVMVTGASSGIGLATASALAAHGA-HVVM--ACRDMEKAHKAELHIKKTNK 142
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 27 SHEWKDKVVFITGAATGIGESVVR 98
S + KV +TG + GIGE VVR
Sbjct: 7 SGRYAGKVTIVTGGSKGIGEGVVR 30
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,123,904
Number of Sequences: 59808
Number of extensions: 409706
Number of successful extensions: 1123
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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