Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n03r
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    30   0.066
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.82 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   1.1  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   2.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.8  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   7.6  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
 Frame = -1

Query: 616 RDRQLVV---LNAWLGAWGMERR 557
           R+R  V+   +N W GAWGMERR
Sbjct: 115 RNRDTVIGGYVNVWSGAWGMERR 137



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 508 VRGPTEWSIYADDMLIGELE 449
           V GPT W++  DD+L   LE
Sbjct: 626 VLGPTLWNVMYDDLLRLPLE 645


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -3

Query: 725 PTNATFFRDRPHGRRPRVAAAEHSSTRQRPSARR 624
           PT        P GRR R A A     R RP ARR
Sbjct: 479 PTRVAAAAAAPEGRRRRRAIARARRRRCRPRARR 512


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 540 LFLEH*LHFKLSAVRLNGLYTLTIC*SAS*SI-ALHQEA*RHCAS 409
           L L H     L A  LNGLY L++    + ++  +H EA R+C+S
Sbjct: 421 LLLSHNKLKYLDAYSLNGLYALSLLSLDNNALTGVHPEAFRNCSS 465


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 617 TGSATCRAQRLARCLGHGEETTHRQTYSW 531
           + S TC AQ+LA  +  GEE T R  + W
Sbjct: 93  SNSPTCGAQQLADRIYFGEE-TERGAHPW 120


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 508 VRGPTEWSIYADDMLIGELEHRAS 437
           + GPT W+I  D +L  EL   AS
Sbjct: 640 ILGPTLWNIMYDGVLAVELPEGAS 663



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 658 IHLHVNVRAHVESQRDRQLVVLNAWLG 578
           +H H++ R HVE   D+ L V+ A  G
Sbjct: 747 LHDHLSWRPHVEMVADKALRVVRALRG 773


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 686 RRPRVAAAEHSSTRQRPSARRVATGSATC 600
           R PR   +E   TR  PS+ R+A  S TC
Sbjct: 35  RCPRTRRSEAVMTRSTPSSPRLAQAS-TC 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,594
Number of Sequences: 2352
Number of extensions: 15965
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)