Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n03r
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 44 9e-05
U64852-4|AAB04967.1| 192|Caenorhabditis elegans Galectin protei... 36 0.023
AB038501-1|BAB11966.1| 192|Caenorhabditis elegans galectin LEC-... 36 0.023
Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical pr... 36 0.041
M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactosid... 36 0.041
AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galect... 36 0.041
Z66512-6|CAC70097.1| 278|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 34 0.094
AB038503-1|BAB11968.1| 278|Caenorhabditis elegans galectin LEC-... 34 0.094
Z49067-2|CAA88850.1| 283|Caenorhabditis elegans Hypothetical pr... 34 0.12
U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin prote... 34 0.12
AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-... 34 0.12
AB038505-1|BAB11970.1| 283|Caenorhabditis elegans galectin LEC-... 34 0.12
Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.38
U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protei... 31 0.66
AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-... 31 0.66
AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical ... 31 1.2
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 31 1.2
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 31 1.2
AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear horm... 29 4.7
Z92833-1|CAE17827.1| 160|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear recep... 28 8.1
AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear horm... 28 8.1
AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-... 28 8.1
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = -1
Query: 631 HVESQRDRQLVVLNAWLGAWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGEL 452
H+ Q R ++ N+W G+WG E+ + + G + +++GPT +SIY ++LI +
Sbjct: 63 HIRVQYLRNSIIYNSWFGSWGGEQFSQQP-FLSGNYYSISVLKGPTYYSIYMGNLLITKY 121
Query: 451 EHR 443
R
Sbjct: 122 AFR 124
>U64852-4|AAB04967.1| 192|Caenorhabditis elegans Galectin protein
10 protein.
Length = 192
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = -1
Query: 745 LGITGRLRPMLH-SFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNA-WLGAW 572
+ + G +R H +FA++L+ G PN+ LHVN R H E +VV+N+ + G W
Sbjct: 25 ISVHGHVRHGHHKNFAVELLSG------PNVVLHVNFRFHHE-----HVVVMNSQFSGMW 73
Query: 571 GMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLYP 392
G E R + L I + I + + + HR V+A+ ++GD++
Sbjct: 74 GPEIRHKNP-LHHSEHFHLSIKVHAGYYHISVNGHHLADYPHRYPYQSVQAIGLKGDVHV 132
Query: 391 QRI 383
++
Sbjct: 133 DKV 135
>AB038501-1|BAB11966.1| 192|Caenorhabditis elegans galectin LEC-10
protein.
Length = 192
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = -1
Query: 745 LGITGRLRPMLH-SFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNA-WLGAW 572
+ + G +R H +FA++L+ G PN+ LHVN R H E +VV+N+ + G W
Sbjct: 25 ISVHGHVRHGHHKNFAVELLSG------PNVVLHVNFRFHHE-----HVVVMNSQFSGMW 73
Query: 571 GMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLYP 392
G E R + L I + I + + + HR V+A+ ++GD++
Sbjct: 74 GPEIRHKNP-LHHSEHFHLSIKVHAGYYHISVNGHHLADYPHRYPYQSVQAIGLKGDVHV 132
Query: 391 QRI 383
++
Sbjct: 133 DKV 135
>Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical
protein W09H1.6b protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F I+L ++ ++ LHV+VR D +VLN++ G WG E R+ + G
Sbjct: 46 FTINLHSKTADFSGNDVPLHVSVRF------DEGKIVLNSFSNGEWGKEERKSNP-IKKG 98
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
+I + I D + EHR + L + GDLY
Sbjct: 99 DSFDIRIRAHDDRFQIIVDHKEFKDYEHRLPLSSISHLSIDGDLY 143
>Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical
protein W09H1.6a protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F I+L ++ ++ LHV+VR D +VLN++ G WG E R+ + G
Sbjct: 40 FTINLHSKTADFSGNDVPLHVSVRF------DEGKIVLNSFSNGEWGKEERKSNP-IKKG 92
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
+I + I D + EHR + L + GDLY
Sbjct: 93 DSFDIRIRAHDDRFQIIVDHKEFKDYEHRLPLSSISHLSIDGDLY 137
>M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactoside
binding protein protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F I+L ++ ++ LHV+VR D +VLN++ G WG E R+ + G
Sbjct: 40 FTINLHSKTADFSGNDVPLHVSVRF------DEGKIVLNSFSNGEWGKEERKSNP-IKKG 92
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
+I + I D + EHR + L + GDLY
Sbjct: 93 DSFDIRIRAHDDRFQIIVDHKEFKDYEHRLPLSSISHLSIDGDLY 137
>AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galectin
protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F I+L ++ ++ LHV+VR D +VLN++ G WG E R+ + G
Sbjct: 40 FTINLHSKTADFSGNDVPLHVSVRF------DEGKIVLNSFSNGEWGKEERKSNP-IKKG 92
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
+I + I D + EHR + L + GDLY
Sbjct: 93 DSFDIRIRAHDDRFQIIVDHKEFKDYEHRLPLSSISHLSIDGDLY 137
>Z66512-6|CAC70097.1| 278|Caenorhabditis elegans Hypothetical
protein F52H3.7b protein.
Length = 278
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 643 NVRAHVESQRDRQLVVLNAWLG-AWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDM 467
++ H+ ++ D + VV N+ + AWG E R+ +I P +++ +
Sbjct: 188 DIALHLNARFDEKHVVRNSLINSAWGNEEREGKMPFEKAVGFDLEIHNEPYAFAVTVNGE 247
Query: 466 LIGELEHRASPGGVKALRVRGDL 398
HR SP V L++ GD+
Sbjct: 248 RFASYAHRLSPDEVNGLQIGGDV 270
Score = 31.1 bits (67), Expect = 0.87
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F ++L ++ ++ LHV+VR D +V N + G WG E R+ G
Sbjct: 38 FTVNLHTNTADFSGNDVPLHVSVRF------DEGKLVFNTFSKGEWGKEERKSNPYK-KG 90
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDL 398
+I +++ I+ D + E EHR + + GD+
Sbjct: 91 DDIDIRIRAHDSKFQIFVDQKEVKEYEHRVPLSSITHFTIDGDV 134
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical protein
F52H3.7a protein.
Length = 1245
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 643 NVRAHVESQRDRQLVVLNAWLG-AWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDM 467
++ H+ ++ D + VV N+ + AWG E R+ +I P +++ +
Sbjct: 1155 DIALHLNARFDEKHVVRNSLINSAWGNEEREGKMPFEKAVGFDLEIHNEPYAFAVTVNGE 1214
Query: 466 LIGELEHRASPGGVKALRVRGDL 398
HR SP V L++ GD+
Sbjct: 1215 RFASYAHRLSPDEVNGLQIGGDV 1237
Score = 31.1 bits (67), Expect = 0.87
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F ++L ++ ++ LHV+VR D +V N + G WG E R+ G
Sbjct: 1005 FTVNLHTNTADFSGNDVPLHVSVRF------DEGKLVFNTFSKGEWGKEERKSNPYK-KG 1057
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDL 398
+I +++ I+ D + E EHR + + GD+
Sbjct: 1058 DDIDIRIRAHDSKFQIFVDQKEVKEYEHRVPLSSITHFTIDGDV 1101
>AB038503-1|BAB11968.1| 278|Caenorhabditis elegans galectin LEC-2
protein.
Length = 278
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 643 NVRAHVESQRDRQLVVLNAWLG-AWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDM 467
++ H+ ++ D + VV N+ + AWG E R+ +I P +++ +
Sbjct: 188 DIALHLNARFDEKHVVRNSLINSAWGNEEREGKMPFEKAVGFDLEIHNEPYAFAVTVNGE 247
Query: 466 LIGELEHRASPGGVKALRVRGDL 398
HR SP V L++ GD+
Sbjct: 248 RFASYAHRLSPDEVNGLQIGGDV 270
Score = 31.1 bits (67), Expect = 0.87
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = -1
Query: 706 FAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPG 530
F ++L ++ ++ LHV+VR D +V N + G WG E R+ G
Sbjct: 38 FTVNLHTNTADFSGNDVPLHVSVRF------DEGKLVFNTFSKGEWGKEERKSNPYK-KG 90
Query: 529 TLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDL 398
+I +++ I+ D + E EHR + + GD+
Sbjct: 91 DDIDIRIRAHDSKFQIFVDQKEVKEYEHRVPLSSITHFTIDGDV 134
>Z49067-2|CAA88850.1| 283|Caenorhabditis elegans Hypothetical
protein C44F1.3 protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = -1
Query: 745 LGITGRLRPMLHSFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWG 569
L + G++ I+L+ G E PN + ++++ + + ++ V+LN++ G WG
Sbjct: 28 LNVHGKINEGAQVAEINLLQGGGEIG-PNTQVILHLKLNFKEKK----VILNSYENGVWG 82
Query: 568 MERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDL 398
E R+ + G +I I AD+ I E +HR ++ L VRGDL
Sbjct: 83 KEERE-SLPFQAGQEFDLRIRVLDEGLEISADNKKIHEFKHRLPFQSIEYLSVRGDL 138
>U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin protein
5 protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 601 VVLNAWLG-AWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGV 425
VV NA WG E R+ L + I+ + I+ ++ HR SP +
Sbjct: 233 VVRNAMTSNVWGKEEREGKMPLDKKQVFDITIINEEYSFQIFLNNERFTTFSHRGSPSDI 292
Query: 424 KALRVRGDLYPQRI 383
K L + GD+ Q +
Sbjct: 293 KTLEIDGDVEIQTV 306
>AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-5
protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 601 VVLNAWLG-AWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGV 425
VV NA WG E R+ L + I+ + I+ ++ HR SP +
Sbjct: 233 VVRNAMTSNVWGKEEREGKMPLDKKQVFDITIINEEYSFQIFLNNERFTTFSHRGSPSDI 292
Query: 424 KALRVRGDLYPQRI 383
K L + GD+ Q +
Sbjct: 293 KTLEIDGDVEIQTV 306
>AB038505-1|BAB11970.1| 283|Caenorhabditis elegans galectin LEC-4
protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = -1
Query: 745 LGITGRLRPMLHSFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAWG 569
L + G++ I+L+ G E PN + ++++ + + ++ V+LN++ G WG
Sbjct: 28 LNVHGKINEGAQVAEINLLQGGGEIG-PNTQVILHLKLNFKEKK----VILNSYENGVWG 82
Query: 568 MERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDL 398
E R+ + G +I I AD+ I E +HR ++ L VRGDL
Sbjct: 83 KEERE-SLPFQAGQEFDLRIRVLDEGLEISADNKKIHEFKHRLPFQSIEYLSVRGDL 138
>Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical
protein ZK892.1b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = -1
Query: 643 NVRAHVESQRDRQLVVLNAWL-GAWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDM 467
++ H + D + VV N+ + G WG E R+ T +I + I+ +
Sbjct: 188 DIALHFNPRFDEKSVVRNSLVNGEWGNEEREGKNPFERLTAFDLEIRNEEFAFQIFVNGE 247
Query: 466 LIGELEHRASPGGVKALRVRGDL 398
HR P + L+++GD+
Sbjct: 248 RFASYAHRVDPHDIAGLQIQGDI 270
>U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protein 9
protein.
Length = 140
Score = 31.5 bits (68), Expect = 0.66
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = -1
Query: 748 QLGITGRLRPMLHSFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAW 572
Q+ + G ++ F ++L+ G NI LHVN R E Q+ +V +NA + AW
Sbjct: 25 QIAVNGLVKHK-KDFVVNLISGG------NIALHVNFR--FEKQK---IVAINAKIDNAW 72
Query: 571 GMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
G E L QI P + I + +L+G+ HR ++A+ + G ++
Sbjct: 73 GNEISHANP-LHHDQAFDLQIRVYPGYFHITTNGVLLGDFPHRLPFESIQAINLEGKVH 130
>AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-9
protein.
Length = 140
Score = 31.5 bits (68), Expect = 0.66
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = -1
Query: 748 QLGITGRLRPMLHSFAIDLMDGAREWPLPNIHLHVNVRAHVESQRDRQLVVLNAWL-GAW 572
Q+ + G ++ F ++L+ G NI LHVN R E Q+ +V +NA + AW
Sbjct: 25 QIAVNGLVKHK-KDFVVNLISGG------NIALHVNFR--FEKQK---IVAINAKIDNAW 72
Query: 571 GMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLY 395
G E L QI P + I + +L+G+ HR ++A+ + G ++
Sbjct: 73 GNEISHANP-LHHDQAFDLQIRVYPGYFHITTNGVLLGDFPHRLPFESIQAINLEGKVH 130
>AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical
protein W04B5.3c protein.
Length = 353
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 514 QIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLYPQRIFLCPATSTPI 353
+I+ + I ++ + + HR P VK++ V G + + + + P TS P+
Sbjct: 93 KIITSQHSFQILFNESKVADFVHRVDPTLVKSVLVSGPMITEDVTITPGTSQPL 146
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 514 QIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLYPQRIFLCPATSTPI 353
+I+ + I ++ + + HR P VK++ V G + + + + P TS P+
Sbjct: 93 KIITSQHSFQILFNESKVADFVHRVDPTLVKSVLVSGPMITEDVTITPGTSQPL 146
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 514 QIVRGPTEWSIYADDMLIGELEHRASPGGVKALRVRGDLYPQRIFLCPATSTPI 353
+I+ + I ++ + + HR P VK++ V G + + + + P TS P+
Sbjct: 93 KIITSQHSFQILFNESKVADFVHRVDPTLVKSVLVSGPMITEDVTITPGTSQPL 146
>AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 132 protein.
Length = 276
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 686 RRPRVAAAEHSSTRQRPSARRVATGSATCRAQRLARCLGHGEETTHRQ 543
RR H Q+PS + G C+ RL RC+ G T + Q
Sbjct: 33 RRTATVPKWHQKNCQKPSKCKNGEGQYHCKPCRLKRCIAVGMNTENFQ 80
>Z92833-1|CAE17827.1| 160|Caenorhabditis elegans Hypothetical
protein F38A6.4 protein.
Length = 160
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 675 SGRCRTFIYTSTSERT*SRNGIGNLSCSTPGSVLGAWRGDNAPPDL 538
SG I S +E+T S N I NL + + GA PPDL
Sbjct: 17 SGLVSVAISQSITEKTPSLNEIKNLKNTELDEIFGATMSKTPPPDL 62
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Frame = -1
Query: 622 SQRDRQLVVLNAWLGAWGMERRQRTARLIPGTLTTFQ-IVRGPTEWSIYADDMLIGELEH 446
S +R+ ++ W G R+Q+ + L FQ + P E+ + E +
Sbjct: 585 SSNNREAAIIGLWTGVCSKCRKQQGMLITAVLLANFQSLFAVPVEFIEQVKRLECEEKDR 644
Query: 445 RASPGGVKALRVRGDL---YPQRIFLCPAT-STPIRD*KISKTK 326
+ P K R R D P + PA P+R+ KTK
Sbjct: 645 YSGPRYAKITRSRNDWQPPVPDKPQASPAVFKKPLREVACEKTK 688
>Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical
protein ZK892.1d protein.
Length = 312
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 601 VVLNAWL-GAWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGV 425
VV N+ + G WG E R+ T +I + I+ + HR P +
Sbjct: 229 VVRNSLVNGEWGNEEREGKNPFERLTAFDLEIRNEEFAFQIFVNGERFASYAHRVDPHDI 288
Query: 424 KALRVRGDL 398
L+++GD+
Sbjct: 289 AGLQIQGDI 297
>Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical
protein ZK892.1a protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 601 VVLNAWL-GAWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGV 425
VV N+ + G WG E R+ T +I + I+ + HR P +
Sbjct: 214 VVRNSLVNGEWGNEEREGKNPFERLTAFDLEIRNEEFAFQIFVNGERFASYAHRVDPHDI 273
Query: 424 KALRVRGDL 398
L+++GD+
Sbjct: 274 AGLQIQGDI 282
>AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear receptor
NHR-87 protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 635 SARRVATGSATCRAQRLARCLGHG 564
S ++TG+A C+ RLA+CL G
Sbjct: 57 SCEVISTGNALCKGCRLAKCLAVG 80
>AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 87 protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 635 SARRVATGSATCRAQRLARCLGHG 564
S ++TG+A C+ RLA+CL G
Sbjct: 48 SCEVISTGNALCKGCRLAKCLAVG 71
>AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-3
protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 601 VVLNAWL-GAWGMERRQRTARLIPGTLTTFQIVRGPTEWSIYADDMLIGELEHRASPGGV 425
VV N+ + G WG E R+ T +I + I+ + HR P +
Sbjct: 214 VVRNSLVNGEWGNEEREGKNPFERLTAFDLEIRNEEFAFQIFVNGERFASYAHRVDPHDI 273
Query: 424 KALRVRGDL 398
L+++GD+
Sbjct: 274 AGLQIQGDI 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,191,638
Number of Sequences: 27780
Number of extensions: 326955
Number of successful extensions: 870
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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