Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10n02r
         (568 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    48   2e-04
UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6; Anaplasmata...    37   0.38 
UniRef50_A5CB09 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_Q89Q99 Cluster: ABC transporter permease protein; n=33;...    33   6.2  
UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21...    32   8.1  
UniRef50_A4J310 Cluster: Putative uncharacterized protein precur...    32   8.1  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
 Frame = -2

Query: 504 LFVLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFVVSRAATINS-RVVNVRF 328
           +F+   ++A        PRS      +S+G+I +SDRLL +   SR    N  + VNVR+
Sbjct: 55  VFITKVLLADEEMPFVAPRS-----GMSLGNIGASDRLLSASTHSRNPIANQVQTVNVRY 109

Query: 327 TAPXXXXXXXXXXXGSTQFAXXXXXXXXXXXXXVNLQFVNAPRRGFRFTVQIWGR 163
           T             GS Q A             + +Q  +A  RGF + ++IWGR
Sbjct: 110 TGSSSIIILAVRAYGSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIWGR 164


>UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6;
           Anaplasmataceae|Rep: Magnesium transporter - Anaplasma
           marginale (strain St. Maries)
          Length = 483

 Score = 36.7 bits (81), Expect = 0.38
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = +2

Query: 296 TALTRLPAGAVNLTLTTRELIVAARLTTKLRKSLSLEVILPILKALALSVDLGSATSLVD 475
           T + RLP   VNL  ++   IV    +  +R  ++L +I+P++ +++ +  L + T  + 
Sbjct: 315 TVVKRLPWLLVNLLTSSASSIVIGWFSETIRSFIALSIIMPMIASMSGNSGLQALTVTIR 374

Query: 476 T-ATIAVNTNNRANFILQETCTGTQN 550
             AT  +   N    + +E C G  N
Sbjct: 375 ALATKQLTYRNSRRLLFKELCVGFVN 400


>UniRef50_A5CB09 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 835

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = +2

Query: 227 TKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVNLTLTTRELIVA-ARLTTKLRKSLSL 403
           T + P  PP + T+ +   P T    T LP+   +L  TT   + + + L + L +    
Sbjct: 683 TLLSPVFPPTKATILDVTTPETTPLFTNLPSPLPSLEETTTPHVTSPSSLISPLLEPTIS 742

Query: 404 EVILPILKALALSVDLGSATSLVDTATIA 490
           +VI P    + + V L S  S +  ATI+
Sbjct: 743 DVIAP--ATITIDVILPSPISPILNATIS 769


>UniRef50_Q89Q99 Cluster: ABC transporter permease protein; n=33;
           Bacteria|Rep: ABC transporter permease protein -
           Bradyrhizobium japonicum
          Length = 297

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +2

Query: 302 LTRLPAGAVNLTLTTRELIVAARLTTKLRKSLSLEVILP-ILKALALSVDLGSATSLVDT 478
           LTRL  G+ N  +  RE ++AAR + K +  +++E +LP IL  L +   +  A +++  
Sbjct: 171 LTRLTRGSAN-AIWAREFVLAARASGKGKFRITIEHVLPNILSILIVQATIQFALAILAE 229

Query: 479 ATIA 490
           A ++
Sbjct: 230 AALS 233


>UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21;
           Pseudomonadaceae|Rep: Cation-transporting P-type ATPase
           - Pseudomonas putida (strain KT2440)
          Length = 882

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 413 LPILKALALSVDLGSATSLVDTATIAVNTNNRANFILQ 526
           +P+L A  +S+ +GSAT L  T+  AV  +NR   ++Q
Sbjct: 759 VPVLAAADISIAMGSATDLAKTSADAVLLSNRLQALVQ 796


>UniRef50_A4J310 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 118

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = -2

Query: 522 KMKFALLFVLTAIVAVSTNEVADPRSTDRANAL-SIGSITSSDRLLRSFV 376
           K K  +LF + AI+A++T   ADP + D    L ++ + T +D++L+ F+
Sbjct: 6   KDKILILFSIMAILALATPCFADPANPDITTGLGNVDAKTLADKILKIFI 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,709,371
Number of Sequences: 1657284
Number of extensions: 8378508
Number of successful extensions: 23987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23974
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)