Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10n01r
(773 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 392 e-108
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 376 e-103
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 284 2e-75
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 270 3e-71
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 214 2e-54
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 209 5e-53
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 186 7e-46
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 152 1e-35
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 131 2e-29
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 114 3e-24
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 3e-24
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 109 8e-23
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 105 9e-22
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 101 2e-20
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 100 3e-20
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 100 3e-20
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 100 5e-20
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 96 7e-19
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 95 1e-18
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 93 5e-18
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 89 2e-16
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 87 5e-16
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 85 2e-15
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 67 4e-10
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 34 3.4
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ... 33 6.0
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 7.9
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 392 bits (965), Expect = e-108
Identities = 179/246 (72%), Positives = 208/246 (84%)
Frame = -1
Query: 773 RYCSXVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 594
+YC +RVIAHTQM+LL RQKKAH+MEIQ+NGGT+ +K+ WARE LE+ +PV+ VF QD
Sbjct: 155 KYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQD 214
Query: 593 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 414
EMID I TSRWHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGY
Sbjct: 215 EMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGY 274
Query: 413 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 234
HHRTE+NKKIY+IGQG KDGK+IKNNAST+YDLS+KSI P+GGF HYGEV NDFVM+K
Sbjct: 275 HHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLK 334
Query: 233 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKK 54
GC +G KKR++TLRKSL V TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKK
Sbjct: 335 GCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKK 394
Query: 53 DRIREE 36
DRI +E
Sbjct: 395 DRIAKE 400
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 376 bits (926), Expect = e-103
Identities = 172/245 (70%), Positives = 198/245 (80%)
Frame = -1
Query: 773 RYCSXVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 594
+YC +RVI HTQMKLL RQKKAHIMEIQLNGGT+ +KV WA+ LEK +PV SVF+Q
Sbjct: 155 KYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQS 214
Query: 593 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 414
E+ID I TSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGY
Sbjct: 215 EVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGY 274
Query: 413 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 234
HHRTE+NKKI+RIG+G H +DGK++KNNAST YD++ KSITP+GGFPHYGEVNNDFVM+K
Sbjct: 275 HHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLK 334
Query: 233 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKK 54
GC G KKR+ITLRKSL VH R A+E I LKFIDT+SKFGHGRFQT +K AFMG KK
Sbjct: 335 GCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKK 394
Query: 53 DRIRE 39
+E
Sbjct: 395 HLEKE 399
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 284 bits (696), Expect = 2e-75
Identities = 135/244 (55%), Positives = 169/244 (69%), Gaps = 3/244 (1%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQ---KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEM 588
+RV+AHTQ++ L+ + KKAH+ EIQ+NGGTI K++ A+ LEK + +DSVF Q E
Sbjct: 211 IRVVAHTQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEA 270
Query: 587 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHH 408
D RW LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHH
Sbjct: 271 CDVCAVTKGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHH 330
Query: 407 RTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGC 228
RT +NKKIY++G+ + + N A+T YDL+ K+ITPMGGF YG V ND+VM+KG
Sbjct: 331 RTHLNKKIYQLGRAVSME-----PNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGS 385
Query: 227 CMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDR 48
GP++R+ITLR+ + T R EKI LKFIDTSSK GHGRFQT +K+ + G LKKDR
Sbjct: 386 VAGPRRRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLKKDR 445
Query: 47 IREE 36
IR E
Sbjct: 446 IRRE 449
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 270 bits (661), Expect = 3e-71
Identities = 128/190 (67%), Positives = 149/190 (78%)
Frame = -1
Query: 608 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 429
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 428 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 249
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 248 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 69
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 68 GTLKKDRIRE 39
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 214 bits (523), Expect = 2e-54
Identities = 116/232 (50%), Positives = 151/232 (65%)
Frame = -1
Query: 746 AHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXX 567
A TQM LL QKKAH+ E Q+N G + K+ WA + LE+ +PV+ +F + I
Sbjct: 121 ALTQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTT 178
Query: 566 XXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 387
+S W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKK
Sbjct: 179 KGKHYKGISSHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKK 231
Query: 386 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 207
IY+IGQG K+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G KKR
Sbjct: 232 IYKIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTKKR 288
Query: 206 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 51
+++L KSL + TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LKKD
Sbjct: 289 VLSLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLKKD 340
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 209 bits (511), Expect = 5e-53
Identities = 119/246 (48%), Positives = 153/246 (62%)
Frame = -1
Query: 773 RYCSXVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 594
+YC + ++AHTQM LL QKKAH+MEIQ+ G + W RE + QD
Sbjct: 149 KYCQVICIVAHTQMCLLSLHQKKAHLMEIQVMGHC---GLSW-REAVN----------QD 194
Query: 593 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 414
E+ID I T + P + +G K+ C+GAWHP+RV+F+VA+ GQKGY
Sbjct: 195 EIIDVIKETKGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGY 253
Query: 413 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 234
HH + NKKI +IGQG KDGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+ +K
Sbjct: 254 HHNGD-NKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLK 312
Query: 233 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKK 54
GC + KK +T+ K L V T + AL+KI+ K DT+ K GHG FQT K AF+G LKK
Sbjct: 313 GCAVRTKKH-LTICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLKK 371
Query: 53 DRIREE 36
+ EE
Sbjct: 372 ECTAEE 377
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 186 bits (452), Expect = 7e-46
Identities = 95/214 (44%), Positives = 136/214 (63%)
Frame = -1
Query: 710 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 531
KK + E + GG+ + K+++ + K I ++S+F ++++ID I SRW
Sbjct: 158 KKKYFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRW 217
Query: 530 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 351
+LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT NKKIY+IG +++
Sbjct: 218 GITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGS---EEN 274
Query: 350 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 171
N+ S D KS+ MGGF +G +NND+++IKG G KR I LRK+++
Sbjct: 275 FSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSKRPILLRKNIKNKI 331
Query: 170 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 69
EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 332 SSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 152 bits (368), Expect = 1e-35
Identities = 83/214 (38%), Positives = 121/214 (56%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
VR I TQ ++K + KK +ME + G ++E+K + +E L K + V V + E++D
Sbjct: 163 VRAIVATQPWVIKLK-KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDV 221
Query: 578 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 399
I RW K K KG RKV IG WHP+RV +TV AGQ G+HHRTE
Sbjct: 222 IAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTE 281
Query: 398 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 219
+NK++ IG+ +GK +K + +TE + ITP GGFPHYG V +DF+MI G G
Sbjct: 282 LNKRLIAIGE-----NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPG 330
Query: 218 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 117
KRII +R ++R K+ +++ + ++ SK
Sbjct: 331 AIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 131 bits (317), Expect = 2e-29
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
VRV+ HT KL +KK I+EI++ G IE+++ +A+E L K + + VF + E++D
Sbjct: 139 VRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDT 198
Query: 578 IXXXXXXXXXXXTSRWHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHR 405
I RW K + + KG+ R V IG W P V ++V GQ GYH R
Sbjct: 199 IGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQR 258
Query: 404 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 225
TE NK+I +IG NN ITP GGF HYG + N++V++KG
Sbjct: 259 TEYNKRILKIG------------NNGD--------EITPKGGFLHYGVIRNNYVVLKGSV 298
Query: 224 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 111
GP KR+I LR+++R + ++ + +I T+SK G
Sbjct: 299 QGPAKRLIVLRRAIR--PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 114 bits (274), Expect = 3e-24
Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAH-IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMID 582
VR+I TQ L+K K IME+ L GG K++WA E L I +D V+ + +D
Sbjct: 163 VRLIVATQPALVKSVPSKTPVIMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELD 222
Query: 581 CIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRT 402
+ R+ K L K K R++ +G + V T+ +AGQ GYH RT
Sbjct: 223 VVGITKGKGWQGVIKRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRT 282
Query: 401 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 222
E+NK+I RI + E +TP GGF HYGEV N +++++G
Sbjct: 283 ELNKRILRIS-------------------NPGESDVTPAGGFLHYGEVTNPYMVLEGSLP 323
Query: 221 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 111
GP KR++ R +R HT + ++L ++ TSSK G
Sbjct: 324 GPAKRLLRFRDPVRPHTN---VFDVDLTYVSTSSKQG 357
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 3e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -1
Query: 350 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 171
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 170 KRAALEK 150
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 109 bits (262), Expect = 8e-23
Identities = 69/195 (35%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
+RVI TQ K +KK +ME ++ G + ++ ++A E L + I VF + E++D
Sbjct: 145 IRVIVATQPKKAGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDV 204
Query: 578 IXXXXXXXXXXXTSRWHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHR 405
RW RKT + R + IG PSRV +TV AGQ GYH R
Sbjct: 205 SAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQR 264
Query: 404 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 225
TE NK+I +IG+ DG + +TP GGF +YG V D++MI G
Sbjct: 265 TEHNKRILKIGE-----DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTV 304
Query: 224 MGPKKRIITLRKSLR 180
GPKKR+I +R ++R
Sbjct: 305 PGPKKRLIRVRPAVR 319
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 105 bits (253), Expect = 9e-22
Identities = 73/217 (33%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Frame = -1
Query: 758 VRVIAHTQM-KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMID 582
VR+I +Q K+ K IME+ L GG + ++ WA E L + + ++ VF ID
Sbjct: 143 VRLIVSSQPDKVSAVGSKSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDID 202
Query: 581 CIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRT 402
I R+ K L K K R++ +G + V T+ +AGQ GYH RT
Sbjct: 203 VIGVTKGYGNQGVVRRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRT 262
Query: 401 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 222
E NK+I RI A E E ITP GGF HYGEV N +++I+G
Sbjct: 263 EYNKRILRI---------------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLP 303
Query: 221 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 111
GP KR+I R + R R +++ ++ T+SK G
Sbjct: 304 GPAKRLIRFRDAAR---PRREQPPVDITYVSTASKQG 337
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 101 bits (243), Expect = 2e-20
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Frame = -1
Query: 713 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 534
+K +ME ++ GG + + ++A+ + K + + VFA E++D R
Sbjct: 157 KKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVR 216
Query: 533 WHTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 360
W RK + +K V +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 217 WGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG---- 272
Query: 359 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 180
D +E+ ITP GGF HYG + ND++M+KG GP KR++ +R ++R
Sbjct: 273 ---------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAVR 316
Query: 179 VHTKRAALEKINLKFIDTSSKFG 111
K + + ++ T SK G
Sbjct: 317 --PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 100 bits (240), Expect = 3e-20
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQ-RQKKAHIMEIQLNGG-TIEDKVKWAREHLEKPIPVDSVFAQDEMI 585
VR+I T+ K + KK I E+++ GG +++++ ++A HL K I + + +
Sbjct: 133 VRLIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFV 192
Query: 584 DCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHR 405
D + R+ K LPRK K R + +G WHP V TV +AGQ GY R
Sbjct: 193 DVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQR 252
Query: 404 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 225
T N ++ + +G +A T I GGF HYG V ND+V++ G
Sbjct: 253 TISNVRVLKYSKG----------EDADT--------INVRGGFLHYGLVKNDYVLLFGSV 294
Query: 224 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 111
GP KR+I +R R K ++ + L +I SK G
Sbjct: 295 PGPAKRLIKMRDPAR--QKVPDIDNVKLDYISLESKQG 330
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 100 bits (240), Expect = 3e-20
Identities = 64/214 (29%), Positives = 106/214 (49%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
V++I TQ +K + K I +I + G + K+++A L K + ++ VF + + +D
Sbjct: 133 VKIIVSTQPWKIKLK-KTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDV 191
Query: 578 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 399
I R+H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE
Sbjct: 192 IAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTE 251
Query: 398 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 219
NK I +IG+ ++ + GG+ YG+V +++KG G
Sbjct: 252 YNKLIIKIGEPLNVE-----------------------GGWVRYGQVIGPTILLKGSVPG 288
Query: 218 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 117
P+KR+I LR+++R K+ +E +++I S K
Sbjct: 289 PRKRLIILREAIRPPRKQEKVE--GIEYISLSPK 320
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 100 bits (239), Expect = 5e-20
Identities = 59/178 (33%), Positives = 87/178 (48%)
Frame = -1
Query: 713 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 534
QKK +I E ++GG I + +E L K I +D +F +D R
Sbjct: 155 QKKPYIFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKR 214
Query: 533 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 354
W+ KK K+ K +R+V +G P V +TV RAGQ G+H R E +K+I +G
Sbjct: 215 WNVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG------ 268
Query: 353 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 180
+T+ D + I P GGF H+G V DF+++KG G +R+I LR +R
Sbjct: 269 ---------NTDDD--KLKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIKLRSQIR 315
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 96.3 bits (229), Expect = 7e-19
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Frame = -1
Query: 764 SXVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMI 585
S VRV+A TQ +L +KK ++EI + GG E + A E L K + + VF + + I
Sbjct: 136 SEVRVLAATQPRLSGLGKKKPELIEIAV-GGPPEKALSLALEKLGKDLTISDVFKEGDYI 194
Query: 584 DCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 411
D I R+ +++PR K KG ++ +G P+ + F GQ G+H
Sbjct: 195 DVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFH 253
Query: 410 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 231
RTE NK+I ++G D + S K I P GG+PHYG V + F++++G
Sbjct: 254 QRTEYNKRILKVG------DAE------------SLKEINPPGGWPHYGLVRSQFIIVEG 295
Query: 230 CCMGPKKRIITLRKSLR 180
G KR++ LR ++R
Sbjct: 296 SVPGAVKRLVRLRHAIR 312
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 95.5 bits (227), Expect = 1e-18
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
+RVIA T L +KK I+EI++ GGT+ +++ +A + L + VD VF + + ID
Sbjct: 200 IRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDI 259
Query: 578 IXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHH 408
I R+ K+LPR K KG RK IG+ P + + + GQ G+H
Sbjct: 260 IGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHR 316
Query: 407 RTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGC 228
RTE NK+I +IG ++ +TP GGF YG V ++M+ G
Sbjct: 317 RTEYNKRIIKIG--------------------INGWEVTPKGGFLGYGIVYGPYIMLHGS 356
Query: 227 CMGPKKRIITLRKSLR 180
+GP+KR++ LR +R
Sbjct: 357 IIGPRKRLLVLRHPIR 372
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 93.5 bits (222), Expect = 5e-18
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Frame = -1
Query: 758 VRVIAHTQM-KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKP--IPVDSVFAQDEM 588
+RVI HT +K +ME ++ GGT+ D++++A + +E VF E
Sbjct: 138 IRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEF 197
Query: 587 IDCIXXXXXXXXXXXTSRWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGY 414
D RW +K K +G R+ + +G W+PSRV TV + GQ GY
Sbjct: 198 TDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGY 257
Query: 413 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 234
H RTE+NK++ I G TP GGFP+YGEV+ + ++K
Sbjct: 258 HQRTELNKRLIDINDG---------------------DEPTPDGGFPNYGEVDGPYTLVK 296
Query: 233 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 111
G GP++R++ R ++R + + L+ ++++ T+S G
Sbjct: 297 GSVPGPEQRLVRFRPAVRPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 88.6 bits (210), Expect = 2e-16
Identities = 51/189 (26%), Positives = 88/189 (46%)
Frame = -1
Query: 713 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 534
QK+ +I E + GG+++++ + ++ L K + V +D R
Sbjct: 153 QKRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR 212
Query: 533 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 354
K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+I +G
Sbjct: 213 MGAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSA---- 268
Query: 353 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 174
G+ + +I P GG+ H+G V D++++KG G +R++ LR +R
Sbjct: 269 -GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNA 314
Query: 173 TKRAALEKI 147
KR + I
Sbjct: 315 PKRTSKPNI 323
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 87.0 bits (206), Expect = 5e-16
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 755 RVIAHTQMKLLKQRQKKA-HIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 579
R++ TQ + + KKA ++EIQ+ GG + ++ +A L K I + VF + ++ID
Sbjct: 158 RLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDV 217
Query: 578 IXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHR 405
+ R+ +LPR K KG RK+ G S+T + GQ G+H R
Sbjct: 218 VGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRR 275
Query: 404 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 225
TE NK+I +IG K I P GGF YG V N +V+++G
Sbjct: 276 TEYNKRIIKIGD--------------------EPKEINPAGGFVRYGIVRNTYVLLEGSI 315
Query: 224 MGPKKRIITLRKSLR 180
+G KKR I LR+ +R
Sbjct: 316 LGSKKRPIFLREPVR 330
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -1
Query: 224 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 45
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 44 REE 36
+E
Sbjct: 148 AKE 150
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 85.0 bits (201), Expect = 2e-15
Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 7/223 (3%)
Frame = -1
Query: 758 VRVIAHTQMKLLKQ-RQKKAHIMEIQLNGGTIEDKV-KWAREHLEKPIPVDSVFAQDEMI 585
VR+IA +Q KL +KK ++EI++ G + K+ +A++ L I V+ VF + +++
Sbjct: 144 VRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLV 203
Query: 584 DCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSF-TVARAGQKGY 414
D I RW K+LPR K KG R+ IGA R +F +AGQ G+
Sbjct: 204 DVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGF 260
Query: 413 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 234
H RTE NK+I I +K +TP GGF YG V + FVM+
Sbjct: 261 HRRTEYNKRILMIDDDGYK--------------------VTPAGGFLRYGVVRSTFVMLS 300
Query: 233 GCCMGPKKRIITLRKSLRVHT--KRAALEKINLKFIDTSSKFG 111
G G KR I +R ++R + + K + +I +SK G
Sbjct: 301 GSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 77.4 bits (182), Expect = 4e-13
Identities = 40/116 (34%), Positives = 59/116 (50%)
Frame = +3
Query: 408 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVN 587
+++T LTS+ + MPS+N N + P+ DT + GD+N +N
Sbjct: 1 MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60
Query: 588 HFILGKHRIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXXVGNDS 755
HFIL ++R++R+ F ++F GP +FV DGTTV LDF V V DS
Sbjct: 61 HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDS 116
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 67.3 bits (157), Expect = 4e-10
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Frame = -1
Query: 713 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 534
+K I+E+++ G +E +++A+ L + + V+ V + +D I R
Sbjct: 179 KKAPDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKR 237
Query: 533 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 360
+ K+LP+ K KG R+V +W S+ V + GQ GYH RT+ NK++ I
Sbjct: 238 FGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMISDDPS 295
Query: 359 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 180
K I GG+ HYG V + +V++KG GP KR I +R +R
Sbjct: 296 K--------------------INVEGGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLPVR 335
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +3
Query: 195 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHRCNGFLRQVILSRCIVFNNFAILFVDSLS 374
+ N+ + TL H ++ YF + +SH ++I + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 375 NTIDFLVHFSTVMITFLTST 434
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 383 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 204
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 203 ITLRKSLR 180
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 184 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSKRRLTRLHSWVH 62
C C + G +R T +SLTP PS M S+ R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 6.0
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -1
Query: 425 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 246
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 245 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 156
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
Arabidopsis thaliana|Rep: Putative F-box protein
At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
Length = 518
Score = 33.5 bits (73), Expect = 6.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 610 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 735
E TG+ S+C +H +S + PL W+SI+ F + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 7.9
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -1
Query: 263 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 138
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,769,634
Number of Sequences: 1657284
Number of extensions: 16567625
Number of successful extensions: 40279
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 38903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40252
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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