Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10m24f
(529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 34 0.083
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 32 0.25
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 32 0.34
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 31 0.59
SB_39624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_3463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_24455| Best HMM Match : Chromadorea_ALT (HMM E-Value=3.8) 29 3.1
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 4.1
SB_38466| Best HMM Match : DUF59 (HMM E-Value=8.2) 28 5.5
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 28 5.5
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 28 5.5
SB_1008| Best HMM Match : DUF59 (HMM E-Value=8.2) 28 5.5
SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3) 27 7.2
SB_37541| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_31552| Best HMM Match : Fz (HMM E-Value=0.018) 27 7.2
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_35721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 27 7.2
SB_5399| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_46187| Best HMM Match : Phage_integrase (HMM E-Value=1) 27 9.6
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 141 CIGQENFLRIASIEDCFHYFQCYAGRSYLMRCPEETWFNEAEQVCDWSD 287
C+G++N + A +C + C G Y M CP ++ A+ C+W+D
Sbjct: 518 CVGKQNG-KYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWAD 565
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 132 ETLCIGQENFLRIASIEDCFHYFQCYAGRSYLMRCPEETWFNEAEQVCD 278
E C G+ + A +DC Y+QC GRS+ CP+ FN + CD
Sbjct: 225 EKFCAGKTDGT-YADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCD 272
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 33.9 bits (74), Expect = 0.083
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 171 ASIEDCFHYFQCYAGRSYLMRCPEETWFNEAEQVCDWS 284
A E+C+ + C G ++ CP FN VCDWS
Sbjct: 467 AEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWS 504
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 TLCIGQENFLRIASIEDCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
T C + N A DC ++QC A R++L RCP ++ + CDW
Sbjct: 886 TFCKDKPNG-HYADPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDW 934
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 171 ASIEDCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
A DC ++QC A R++L RCP ++ + CDW
Sbjct: 1247 ADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDW 1284
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 183 DCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
DC ++QC A R++L RCP ++ + CDW
Sbjct: 1006 DCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDW 1039
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 TLCIGQENFLRIASIEDCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
T C + N A DC ++QC A +++L RCP ++ + CDW
Sbjct: 1136 TFCKDKPNG-HYADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDW 1184
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 ASIEDCFHYFQCY-AGRSYLMRCPEETWFNEAEQVCDWSDLPERCAK 308
A +DC ++ CY + S L RCP ++ ++ CD+ L + C++
Sbjct: 577 ADPKDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVD-CSR 622
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 171 ASIEDCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
A DC ++QC A R++L RC ++ + CDW
Sbjct: 792 ADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDW 829
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 225 DMSGQHSTGSSGNNLQCWLSSGSSPGQCTASPGS 124
D S GS+G+ Q W++ GS P CT SPGS
Sbjct: 443 DNSCNKPDGSTGD-YQPWVNPGSKPRNCTNSPGS 475
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 186 CFHYFQCYAGRSYLMRCPEETWFNEAEQVCDW 281
C Y C G +Y M CP +N+ ++ CDW
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDW 131
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 180 EDCFHYFQCYAGRSYLMRCPEETWFNEAEQVCDW 281
E+C Y C +Y +CP +N+A++ CDW
Sbjct: 74 ENCKMYITCSNKITYERQCPAGLNWNDAKKWCDW 107
>SB_39624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 152 GELPEDSQH*RLFPLLPVLCWP 217
G +PED +H L PL+P WP
Sbjct: 20 GGIPEDVKHKLLKPLIPAKAWP 41
>SB_3463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 152 GELPEDSQH*RLFPLLPVLCWP 217
G +PED +H L PL+P WP
Sbjct: 92 GGIPEDVKHKLLKPLIPAKAWP 113
>SB_24455| Best HMM Match : Chromadorea_ALT (HMM E-Value=3.8)
Length = 362
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 450 IDSEENQVEEPAQPSDEVAEND 515
+D E+ QVEEPA +DE + D
Sbjct: 79 LDDEDEQVEEPASDTDESGKTD 100
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 459 EENQVEEPAQPSDEVAENDEG 521
EE+ EEP P EV++ND G
Sbjct: 65 EEDDSEEPLTPQSEVSKNDNG 85
>SB_38466| Best HMM Match : DUF59 (HMM E-Value=8.2)
Length = 360
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 155 ELPEDSQH*RLFPLLPVLCWP 217
++PED +H L PL+P WP
Sbjct: 155 DIPEDVKHKLLKPLVPAKAWP 175
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 183 DCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
+C ++QC A +++L CP ++ + CDW
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDW 161
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 183 DCFHYFQCYA-GRSYLMRCPEETWFNEAEQVCDW 281
+C ++QC A +++L CP ++ + CDW
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDW 68
>SB_1008| Best HMM Match : DUF59 (HMM E-Value=8.2)
Length = 145
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 155 ELPEDSQH*RLFPLLPVLCWP 217
++PED +H L PL+P WP
Sbjct: 102 DIPEDVKHKLLKPLVPAKAWP 122
>SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)
Length = 513
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 92 DQRRRATQEPQGFVHVDRYQK 30
D R+ATQEP G++ +D +QK
Sbjct: 109 DAYRQATQEPHGYLLMDFHQK 129
>SB_37541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 92 DQRRRATQEPQGFVHVDRYQK 30
D R+ATQEP G++ +D +QK
Sbjct: 166 DAYRQATQEPHGYLLMDFHQK 186
>SB_31552| Best HMM Match : Fz (HMM E-Value=0.018)
Length = 195
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 130 GFCLKFIENAEAPTSAAAQHRSHKALFMLTATKNASDAIYSE 5
G+C I NA S A Q ++ KA+ K+ + +Y E
Sbjct: 53 GYCSSIIGNAYVYGSTAYQQQTEKAMERFAFVKSVMENLYGE 94
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 453 DSEENQVEEPAQPSDEVAENDE 518
D+EE ++EE DEV E DE
Sbjct: 202 DNEEEEIEEREDDDDEVEERDE 223
>SB_35721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 92 DQRRRATQEPQGFVHVDRYQK 30
D R+ATQEP G++ +D +QK
Sbjct: 47 DAYRQATQEPHGYLLMDFHQK 67
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 92 DQRRRATQEPQGFVHVDRYQK 30
D R+ATQEP G++ +D +QK
Sbjct: 391 DAYRQATQEPHGYLLMDFHQK 411
>SB_5399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 92 DQRRRATQEPQGFVHVDRYQK 30
D R+ATQEP G++ +D +QK
Sbjct: 25 DAYRQATQEPHGYLLMDFHQK 45
>SB_46187| Best HMM Match : Phage_integrase (HMM E-Value=1)
Length = 348
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 142 HSVSGFCLKFIENAEAPTSAAAQHRSHKALFMLTATK 32
HSV C+ + +AE P + AQ HK L L ++K
Sbjct: 167 HSVRKTCISRLMDAEIPENYVAQLIGHKNLKSLDSSK 203
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 93 GASAFSINLRQNPETLCIGQENFLRIA--SIEDCFHYFQCYAGRSYLMRCPEET 248
G S ++LR + + ++ LR+ ++E C YF C G Y + P E+
Sbjct: 1298 GTSFLPVDLRWDSKQGQSASDHILRVCLDNVERCAPYFICLLGDRYGVHRPSES 1351
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,744,464
Number of Sequences: 59808
Number of extensions: 203803
Number of successful extensions: 740
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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