Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m24f
         (529 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AY029183-1|AAK31796.1|  798|Homo sapiens SLIT1 isoform B protein.      30   4.4  
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL512424-3|CAI14257.1|  409|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL512424-2|CAI14256.1|  380|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL512424-1|CAI14255.1|  782|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph...    30   4.4  
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.       30   4.4  
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.                30   4.4  
BC063462-1|AAH63462.1|  521|Homo sapiens FUT10 protein protein.        29   7.6  
AJ582015-1|CAE46499.1|  479|Homo sapiens alpha3-fucosyltransfera...    29   7.6  
AJ535839-1|CAD59772.1|  357|Homo sapiens putative alpha3-fucosyl...    29   7.6  
AJ535838-1|CAD59771.1|  391|Homo sapiens putative alpha3-fucosyl...    29   7.6  
AJ512465-1|CAD54669.1|  419|Homo sapiens putative alpha 1,3-fuco...    29   7.6  
AJ431184-1|CAD24023.1|  428|Homo sapiens putative alpha 1,3-fuco...    29   7.6  

>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 1534

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AY029183-1|AAK31796.1|  798|Homo sapiens SLIT1 isoform B protein.
          Length = 798

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 250 GEAGRVPTCTLSSGSCPAMCTCSNGIV 276


>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 1534

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 1461

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AL512424-3|CAI14257.1|  409|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AL512424-2|CAI14256.1|  380|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 243 GEAGRVPTCTLSSGSCPAMCTCSNGIV 269


>AL512424-1|CAI14255.1|  782|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 782

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 250 GEAGRVPTCTLSSGSCPAMCTCSNGIV 276


>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 1534

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1
           (Drosophila) protein.
          Length = 1461

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
          Length = 1534

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 267 GEAGRVPTCTLSSGSCPAMCTCSNGIV 293


>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
          Length = 1618

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 201 GSSGNNLQCWLSSGSSPGQCTASPGSV 121
           G +G    C LSSGS P  CT S G V
Sbjct: 351 GEAGRVPTCTLSSGSCPAMCTCSNGIV 377


>BC063462-1|AAH63462.1|  521|Homo sapiens FUT10 protein protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 228 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 287

Query: 29  CVR 21
           C+R
Sbjct: 288 CLR 290


>AJ582015-1|CAE46499.1|  479|Homo sapiens alpha3-fucosyltransferase
           protein.
          Length = 479

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 186 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 245

Query: 29  CVR 21
           C+R
Sbjct: 246 CLR 248


>AJ535839-1|CAD59772.1|  357|Homo sapiens putative
           alpha3-fucosyltransferase protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 124 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 183

Query: 29  CVR 21
           C+R
Sbjct: 184 CLR 186


>AJ535838-1|CAD59771.1|  391|Homo sapiens putative
           alpha3-fucosyltransferase protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 158 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 217

Query: 29  CVR 21
           C+R
Sbjct: 218 CLR 220


>AJ512465-1|CAD54669.1|  419|Homo sapiens putative alpha 1,3-fucosyl
           transferase protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 186 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 245

Query: 29  CVR 21
           C+R
Sbjct: 246 CLR 248


>AJ431184-1|CAD24023.1|  428|Homo sapiens putative alpha 1,3-fucosyl
           transferase protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 203 LEVVETIFNAGYPQEVLLANAQRLRVLSQVY*E--CGGPDQRRRATQEPQGFVHVDRYQK 30
           LE +E + +  Y   +   N  R R+   VY +  C  P  R    +E   ++ VD Y +
Sbjct: 135 LESIEVLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGE 194

Query: 29  CVR 21
           C+R
Sbjct: 195 CLR 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,738,569
Number of Sequences: 237096
Number of extensions: 969428
Number of successful extensions: 2714
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2714
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)