Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m18r
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   7.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   7.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   7.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 98  STVTQCCRPLNFRSMLVQQRLCFLP 172
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 34  RSRIGPFLFYW 2
           R R+ P+LFY+
Sbjct: 115 RDRVNPYLFYY 125


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 150 SSGCASCRYSR*AETEH 200
           S GC +C Y    E+ H
Sbjct: 33  SQGCKACGYHSPLESNH 49


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 77  PTP*GDAKHHPFSTSLQ 27
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 77  PTP*GDAKHHPFSTSLQ 27
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,025
Number of Sequences: 336
Number of extensions: 1709
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)