BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10m14r (619 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 40 0.002 SB_39126| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015 SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 36 0.026 SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08) 35 0.061 SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 34 0.11 SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_18101| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19 SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 33 0.25 SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 32 0.32 SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43 SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43 SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75 SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 31 0.75 SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 31 0.99 SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 31 0.99 SB_44592| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) 30 1.3 SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) 30 1.3 SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 30 1.3 SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 1.3 SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 29 2.3 SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0 SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 3.0 SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081) 28 5.3 SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 28 5.3 SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17) 28 7.0 SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 7.0 SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27) 28 7.0 SB_33933| Best HMM Match : T-box (HMM E-Value=0) 28 7.0 SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 28 7.0 SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 28 7.0 SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 27 9.2 SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0) 27 9.2 >SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) Length = 439 Score = 39.5 bits (88), Expect = 0.002 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = -2 Query: 282 NPEPVIVDEESEIKPDPVIVVDGP-EVTPVIIADPAIVLPEPVIV-APIEPTPVSPVIIG 109 NP V+ ++ P P +V + P V P ++ D +P PV+ AP P PV+ Sbjct: 52 NPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPP--PVVTD 109 Query: 108 APDLPNPQ*VLDNMTT 61 AP P V D TT Sbjct: 110 APTTVPPPVVTDAPTT 125 Score = 36.3 bits (80), Expect = 0.020 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Frame = -2 Query: 300 PSPVEIN-----PEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIV-APIE 139 PS VE+ P P +V E P PV+ V P ++ D +P PV+ AP Sbjct: 54 PSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDAPTT 113 Query: 138 PTPVSPVIIGAPDLPNP 88 P PV+ AP P Sbjct: 114 VPP--PVVTDAPTTVPP 128 Score = 35.9 bits (79), Expect = 0.026 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGPE-VTPVIIADPAIVLPEPVIVAPIEPTP 130 +T +P + P PV+ D + + P +V D P V P ++ D +P P V P EP Sbjct: 83 VTDAPTTV-PPPVVTDAPTTVPPP--VVTDAPTTVPPPVVTDAPTTVPPP--VQPTEPPS 137 Query: 129 VSPVIIG 109 P IG Sbjct: 138 TRPPPIG 144 Score = 29.1 bits (62), Expect = 3.0 Identities = 22/71 (30%), Positives = 27/71 (38%) Frame = -2 Query: 273 PVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDLP 94 PV+ + + P P P PV DP P V V + P PV+ AP Sbjct: 22 PVLTEAATTQPPAPP---PEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV 78 Query: 93 NPQ*VLDNMTT 61 P V D TT Sbjct: 79 PPPVVTDAPTT 89 >SB_39126| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 106 Score = 36.7 bits (81), Expect = 0.015 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEES-EIKPDPVIVVDGPEVTPVII-ADPAI--VLPEPVIVAPIE 139 L P P EI+P P VD S EI P P P++ P++ DP + + P P + PI+ Sbjct: 13 LEPIPPEIDPIPPEVDTISPEIDPIP------PDINPILPEVDPILPEIDPIPPDITPID 66 Query: 138 PTP--VSPV-IIGAPDLPNPQ*VLDNM 67 PTP P+ + P PN + + D++ Sbjct: 67 PTPPCADPIPAVADPIPPNMEPIPDSI 93 >SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) Length = 4303 Score = 35.9 bits (79), Expect = 0.026 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 13/84 (15%) Frame = -2 Query: 345 SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKP---------DPVIVVDGPEVT 202 +P V+ IVNV+ V+++ EP++ + I+P +P + VDGP V Sbjct: 4077 APTVEPIVNVDAPTIEPIVKVDAPAVEPIVTVDVPTIEPTTSVDAPSNEPTVGVDGPTVE 4136 Query: 201 PVIIADPAIVLPEPVIVAP-IEPT 133 P++ D + P + AP +EPT Sbjct: 4137 PIVSVDALTIEPIVKVDAPAVEPT 4160 Score = 31.5 bits (68), Expect = 0.57 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = -2 Query: 345 SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175 +P V+ IV V+ V ++ EP++ + I +P++ VD P V P++ D Sbjct: 4055 APTVEQIVIVDAHTIEPIVRVDAPTVEPIVNVDAPTI--EPIVKVDAPAVEPIVTVDVPT 4112 Query: 174 VLPEPVIVAPI-EPT 133 + P + AP EPT Sbjct: 4113 IEPTTSVDAPSNEPT 4127 Score = 29.5 bits (63), Expect = 2.3 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = -2 Query: 342 PLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIV 172 P ++ I V+ V ++ EP++ + + + +P+I V P + P++ D V Sbjct: 2925 PTIESIFRVDTPAVKPIVSVDAPTIEPIVRVDATTV--EPIISVHAPTIEPIVRVDAPTV 2982 Query: 171 LPEPVIVAP-IEP 136 P + AP IEP Sbjct: 2983 KPSVSVDAPTIEP 2995 Score = 27.9 bits (59), Expect = 7.0 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -2 Query: 345 SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175 +P ++ IV V+ V ++ EP++ + +P++ VD + P++ D Sbjct: 2968 APTIEPIVRVDAPTVKPSVSVDAPTIEPIV--RVDALTVEPIVSVDAHTIEPIVRVDGPA 3025 Query: 174 VLPEPVIVAPI-EPT 133 V P + AP EPT Sbjct: 3026 VEPIVSVDAPSNEPT 3040 >SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08) Length = 1188 Score = 34.7 bits (76), Expect = 0.061 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 4/113 (3%) Frame = -2 Query: 462 DVEPAIINEFEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPSPV-E 286 +VEP + + EP+ PA+++ P++ V + PV Sbjct: 513 NVEPVLASNVEPVLVSPALLNQCSSAMSNQCSASLASIVEPVLASNVEPVLSSNVEPVLS 572 Query: 285 INPEPVIVDEESEIKPDPVIVVDGPEVTPVI--IADPAIV-LPEPVIVAPIEP 136 N EPV+V + V V V PV+ I +P + + EPV+ + +EP Sbjct: 573 SNVEPVLVSSVEPVLASNVEPVLASIVEPVLASIVEPVLASIVEPVLASIVEP 625 >SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) Length = 631 Score = 33.9 bits (74), Expect = 0.11 Identities = 25/71 (35%), Positives = 28/71 (39%) Frame = -2 Query: 300 PSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVSP 121 PSP P P E + P P V PE P P PEPV AP P P + Sbjct: 143 PSP----PNPTEAPEPETVPPQPETVPPQPETVP---PQPGSEEPEPVSQAPEPPKPKT- 194 Query: 120 VIIGAPDLPNP 88 AP+ P P Sbjct: 195 ---SAPEPPKP 202 >SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2388 Score = 33.9 bits (74), Expect = 0.11 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Frame = -2 Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPV--IIADPAIVL 169 P++ N+ + P P+ P P + + P P+I GP P +I P + Sbjct: 349 PVIVPPPNLLFSFPPPPIIPIPPPAMPAMFNPHVPPPMI---GPVTVPPPPLIPPPQASI 405 Query: 168 PEPVIVAPIEPTPVSPVIIGAPDLPN 91 P P ++ + P V P IG P+ P+ Sbjct: 406 PPPTMIQTLPPPSVPPPPIGVPNRPS 431 >SB_18101| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 113 Score = 33.1 bits (72), Expect = 0.19 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Frame = -2 Query: 336 VQIIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIAD-PAIV 172 +++I + + + SP I+ P ++D+ E+ D P ++ D PEV +P +I D P ++ Sbjct: 10 LEVIDDSPEVIDDSPEVIDGSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVI 69 Query: 171 LPEPVIV 151 P ++ Sbjct: 70 DDSPEVI 76 Score = 30.3 bits (65), Expect = 1.3 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Frame = -2 Query: 471 EPIDVEPAIINEF-EPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPS 295 E ID P +I++ E ID P ++D SP ++I + + + S Sbjct: 11 EVIDDSPEVIDDSPEVIDGSPEVID----------DSPEVIDDSP--EVIDDSPEVIDDS 58 Query: 294 PVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIADPAIVLPE 163 P I+ P ++D+ E+ D P ++ D EV +P +I D + V+ + Sbjct: 59 PEVIDDSPEVIDDSPEVIDDSPKVIDDSREVFDDSPEVIDDSSEVIDD 106 Score = 29.9 bits (64), Expect = 1.7 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = -2 Query: 453 PAIINE-FEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPSPVEINP 277 P +I++ E ID+ P ++D SP ++I + + + SP I+ Sbjct: 3 PEVIDDSLEVIDDSPEVID---DSPEVIDGSPEVIDDSP--EVIDDSPEVIDDSPEVIDD 57 Query: 276 EPVIVDEESEIKPD-PVIVVDGPEV 205 P ++D+ E+ D P ++ D P+V Sbjct: 58 SPEVIDDSPEVIDDSPEVIDDSPKV 82 >SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) Length = 2735 Score = 32.7 bits (71), Expect = 0.25 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = -2 Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEV----TPVIIADPAIVLPEPVIV--APIEPT 133 P+ P P + I P P ++V P V P+++ P IV P +V API Sbjct: 435 PLVYTPSPDVFANPPVIVPQPAVIVQRPPVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHM 494 Query: 132 PV 127 PV Sbjct: 495 PV 496 Score = 32.3 bits (70), Expect = 0.32 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Frame = -2 Query: 303 TPSP-VEINPEPVIVDEESEI-KPDPVIVVDGPEVT---PVIIADPAIVLPEPVIVAPI 142 TPSP V NP PVIV + + I + PV+ P V P++ P +V+P P+ P+ Sbjct: 439 TPSPDVFANP-PVIVPQPAVIVQRPPVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHMPV 496 Score = 31.9 bits (69), Expect = 0.43 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = -2 Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVT----PVIIADPAIVLPEPVIVAPIEPTPV 127 P+ +P P + + P IV+ P V PV++ PA+V +P +V P V Sbjct: 1359 PIIYHPPPEVYHRPDVVLHRPDIVIHRPSVVLHQAPVVVHRPAVVYHQPPVVVHQPPPLV 1418 Query: 126 SPVIIGAPD 100 II + D Sbjct: 1419 HQPIIHSHD 1427 Score = 30.3 bits (65), Expect = 1.3 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = -2 Query: 351 QASPLVQIIVNVNQALTPSPVEINPEP-VIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175 +AS I+VN + P E+ P ++V + P I+ P PVI+ PA+ Sbjct: 1508 KASKKNDIVVNRPPIIYHPPPEVYHRPDIVVHRAPIVLHRPPIIYHQP---PVIVHRPAV 1564 Query: 174 VLPEPVIVAPIEPTPVSPVIIGAPD 100 V +P IV P V ++ + D Sbjct: 1565 VYHQPPIVFHQPPPAVHQPVLHSHD 1589 Score = 28.3 bits (60), Expect = 5.3 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = -2 Query: 330 IIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEVTPVIIADPAIVLPEPVI 154 ++VN + P E+ P IV + I P IV P PV++ PA+V +P I Sbjct: 19 VVVNRPPIIYHPPPEVYHRPEIVVHRAPILIHRPPIVYHQP---PVVVHRPAVVYHQPPI 75 Query: 153 VAPIEPTPVSPVIIGAPD 100 V P V+ ++ + D Sbjct: 76 VFHQPPPAVNQPMLYSHD 93 >SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) Length = 315 Score = 32.3 bits (70), Expect = 0.32 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Frame = -2 Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIA--DPAIVLPEPVIVAPIEPTPVSP 121 P P P+ + +P P+ +D P P I DP P P+ P P P Sbjct: 176 PPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIFPQPTTPAPTKC 235 Query: 120 VIIGAPD 100 +I + Sbjct: 236 QVINTKE 242 Score = 31.9 bits (69), Expect = 0.43 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Frame = -2 Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVII--ADPAIVLPEPVIVAPIEPTPVS- 124 P P P+ + +P P+ +D P P I DP P P + PI+P Sbjct: 163 PPRTQPPPIFPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPP--IPPIDPPRTQP 220 Query: 123 PVIIGAPDLPNP 88 P I P P P Sbjct: 221 PPIFPQPTTPAP 232 >SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2332 Score = 31.9 bits (69), Expect = 0.43 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = -2 Query: 324 VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAP 145 V++ ++ TP+P +P P KP PV + + I+ P P PV+ Sbjct: 934 VDIMRSPTPTPPP-SPPPKEPTPPPSSKPSPVKEIKPKKPIEKFISRPKPPTPPPVVSPH 992 Query: 144 IEPTPVSPVIIGAPDLPNP 88 + P+SPV GA +L P Sbjct: 993 KQTRPISPV--GASNLYKP 1009 >SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1268 Score = 31.9 bits (69), Expect = 0.43 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Frame = -2 Query: 300 PSPVEI-NPEPVIVDEESEIKPDPVIV------VDGPEVTPVIIADPAIVLPEPVIVAPI 142 P P+++ +P PV + + PDP+ V +D P TPV I +P+P V + Sbjct: 391 PGPIDMPDPTPVPKVQTTIDMPDPIPVPKVQTTIDMPGPTPVPKVQTTIDMPDPTPVPKV 450 Query: 141 EPTPVSPVIIGAPDLPNPQ*VLDNMTTDIV 52 + T P G +P Q +D T+ ++ Sbjct: 451 QTTIDMP---GPTPVPKVQTTIDISTSTLL 477 Score = 30.3 bits (65), Expect = 1.3 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Frame = -2 Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVS 124 P P+ + +D I P VD P TPV I +P P+ V ++ T Sbjct: 331 PDPIPVPKVQTNIDMPDPIPVPKVQTTVDMPGPTPVPKVQTTIDMPGPIPVPKVQTTIDM 390 Query: 123 PVIIGAPDLPNP 88 P I PD P P Sbjct: 391 PGPIDMPD-PTP 401 Score = 29.9 bits (64), Expect = 1.7 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 7/87 (8%) Frame = -2 Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIE----- 139 P P+ + +D I P +D P TPV I +P+P+ V ++ Sbjct: 286 PDPIPVPKVQTTIDMPDPIPVPKVQATIDMPGPTPVPKVQTTIDMPDPIPVPKVQTNIDM 345 Query: 138 PTPVS-PVIIGAPDLPNPQ*VLDNMTT 61 P P+ P + D+P P V TT Sbjct: 346 PDPIPVPKVQTTVDMPGPTPVPKVQTT 372 Score = 28.3 bits (60), Expect = 5.3 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 7/78 (8%) Frame = -2 Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVS 124 P P+ + +D I P +D P TPV I +P+P+ V ++ T Sbjct: 226 PGPIPVPKVQTTIDMPGPIPVPKVQTNIDMPGPTPVPKVQATIDMPDPIPVPKVQTTIDM 285 Query: 123 PVIIGAP------DLPNP 88 P I P D+P+P Sbjct: 286 PDPIPVPKVQTTIDMPDP 303 Score = 27.9 bits (59), Expect = 7.0 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = -2 Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLP 166 P+ ++ N++ P P+ + VD P +D P PV I +P Sbjct: 335 PVPKVQTNIDM---PDPIPVPKVQTTVDMPGPTPVPKVQTTIDMPGPIPVPKVQTTIDMP 391 Query: 165 EPVIVAPIEPTPVSPVIIGAPDLPNP 88 P+ + +PTPV P + D+P+P Sbjct: 392 GPIDMP--DPTPV-PKVQTTIDMPDP 414 >SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 682 Score = 31.1 bits (67), Expect = 0.75 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = -2 Query: 327 IVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVA 148 I + + L P E + EP+ V ESE + + P++ P PA + P + + Sbjct: 415 IEEIRKRLVDMPAEDDNEPMQVSRESEREEEDSSDGFKPKLQPTFQPAPAHIETAPKVRS 474 Query: 147 PI-EPTPVSPV 118 P + TPV PV Sbjct: 475 PSPDLTPVQPV 485 >SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) Length = 391 Score = 31.1 bits (67), Expect = 0.75 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGP---EVTPVIIADPAIVLPEPVIVAPIEP 136 + P PV+I P PV +I+P PV + P + PV I P + + +P + I+P Sbjct: 290 IQPPPVDIQPPPV------DIQPPPVDIQQPPVDIQPPPVDIQPPPVDIQQPPV--DIQP 341 Query: 135 TPV 127 PV Sbjct: 342 PPV 344 Score = 30.7 bits (66), Expect = 0.99 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEES-EIKPDPVIVVDGP---EVTPVIIADPAIVLPEP 160 + P PV+I P PV + + +I+P PV + P + PV I P + + +P Sbjct: 297 IQPPPVDIQPPPVDIQQPPVDIQPPPVDIQPPPVDIQQPPVDIQPPPVDIQQP 349 >SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29) Length = 1841 Score = 30.7 bits (66), Expect = 0.99 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -2 Query: 291 VEINPEPVI--VDEESEIKPDPVIVVDGPEVTPVIIADPAIVLP-EPV-IVAPIEPTPVS 124 V + P PV+ + + +P+ VV V PV+ +P V+P PV +V +EP PV Sbjct: 1757 VGMEPNPVVPYAPVQPMVGMEPLPVVPYAPVQPVVGMEPRTVVPYAPVQLVVGMEPRPVV 1816 Query: 123 P 121 P Sbjct: 1817 P 1817 >SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) Length = 1099 Score = 30.7 bits (66), Expect = 0.99 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Frame = -2 Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVT----PVIIADPAIVLPEPVIVAPIEPTPV 127 P+ +P P I + P +V+ P + PVI+ PA+V +P I+ P V Sbjct: 148 PIIYHPPPEIYHRPDIVVHRPPLVIHRPPIIYHQPPVIVHRPAVVYHQPPIIFHQPPPAV 207 Query: 126 SPVIIGAPD 100 S ++ + D Sbjct: 208 SQPLLFSHD 216 >SB_44592| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 185 Score = 30.3 bits (65), Expect = 1.3 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Frame = -2 Query: 333 QIIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIAD 184 ++I + + + SP I+ P ++D+ E+ D P ++ D PEV +P +I D Sbjct: 78 EVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPKVIDD 131 Score = 29.9 bits (64), Expect = 1.7 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%) Frame = -2 Query: 480 ILHEPIDVEPAIINEFEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALT 301 I+H +D + E ID+ P ++D SP ++I + + + Sbjct: 62 IIHSFLDSPEVTYDSPEVIDDSPEVID---DSPEVIDDSPEVIDDSP--EVIDDSPEVID 116 Query: 300 PSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV 205 SP I+ P ++D+ E+ D P ++ D EV Sbjct: 117 DSPEVIDDSPKVIDDSREVFDDSPEVIDDSSEV 149 >SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 924 Score = 30.3 bits (65), Expect = 1.3 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Frame = -2 Query: 348 ASPLVQIIVNVNQALTPSPVEINPEPVIVDEE----SEIKPDPVIVVDGPEVTPVIIADP 181 A P V++I + A P P P P I ++ S + P D P+ P++ A P Sbjct: 817 APPFVKLIASAMAAAFPFPFNPAPAPPITPDDTITRSAVHNLPPCPPDPPQRLPLVEACP 876 Query: 180 AIVLPEPVIVAPIEPTP 130 +P I P P P Sbjct: 877 GSPSVKPAIDWPPPPPP 893 >SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) Length = 331 Score = 30.3 bits (65), Expect = 1.3 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -2 Query: 324 VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVT--PVIIADPAIVLPEPVIV 151 V+ A P E++ +PV E SE+ PV V+ EV+ P +P V +P V Sbjct: 35 VSAKPACNVEPGEVSAKPVGDVEPSEVFAKPVGDVEPGEVSAKPAGDVEPGEVSAKP--V 92 Query: 150 APIEPTPVSPVIIG 109 +EP+ VS + G Sbjct: 93 GDVEPSEVSAKLAG 106 >SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) Length = 300 Score = 30.3 bits (65), Expect = 1.3 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -2 Query: 324 VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVT--PVIIADPAIVLPEPVIV 151 V+ A P E++ +PV E SE+ PV V+ EV+ P +P V +P V Sbjct: 73 VSAKPACNVEPGEVSAKPVGDVEPSEVFAKPVGDVEPGEVSAKPAGDVEPGEVSAKP--V 130 Query: 150 APIEPTPVSPVIIG 109 +EP+ VS + G Sbjct: 131 GDVEPSEVSAKLAG 144 >SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) Length = 1197 Score = 30.3 bits (65), Expect = 1.3 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPV 127 L P + EP+ ++ +S P+P V+ + + P P ++P P P+ Sbjct: 802 LDPDSTKKPTEPIYINRKSLSSPEPESAVELSRPDSLTMEAPTTKTDRP--LSPSAPPPL 859 Query: 126 SPVIIGAP 103 P +GAP Sbjct: 860 PPRPVGAP 867 >SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) Length = 305 Score = 30.3 bits (65), Expect = 1.3 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Frame = -2 Query: 345 SPLVQIIVNVNQALTPSPVEI-NPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVL 169 +P Q + L P+ VE P P++ + P P + P P P Sbjct: 75 APTPQTQASTAPPLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPT--- 131 Query: 168 PEPVIVAPIEPTPVSPVIIGAPDLP 94 P AP P P++P G P P Sbjct: 132 -SPATRAPPPPPPIAPATGGPPPPP 155 >SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 548 Score = 29.5 bits (63), Expect = 2.3 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = -1 Query: 592 SRSKDEIPDHCRYHSRHGFRRACQPRPGDAWLGRPCSHPTRAYRRRTCNHQRIRANRQRT 413 SR + R SR +R + L R +R+Y R + + R R +R RT Sbjct: 155 SRPRSRYRGRSRSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPSPYRSRRSRSRT 214 Query: 412 RYRRLPRSSFPSRHWSHRPR 353 R R SR RPR Sbjct: 215 RRSRSRSRRSRSRSRDRRPR 234 >SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) Length = 1258 Score = 29.5 bits (63), Expect = 2.3 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -2 Query: 186 DPAIVLPEPVIVAPIEPTPVSP 121 +PA + P P+ PI PTP++P Sbjct: 200 NPAAINPTPINPTPINPTPINP 221 >SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) Length = 928 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -2 Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIV--VDGPEVTPVIIADPAIVLPEPVIVAPIEPT 133 L S + I EP+ +E S P+P ++ ++ + ++ P I + + + PI+ Sbjct: 38 LADSILNIKAEPIDAEESSGCMPNPSLIANINKESIEDELLDTPTINIKQEPLEEPIDEC 97 Query: 132 PV 127 PV Sbjct: 98 PV 99 >SB_6983| Best HMM Match : rve (HMM E-Value=0.011) Length = 251 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 234 PVIVVDGPEVTPVIIADPAIVLPEPVIVAPIE-PTP 130 P VVD PE V+ P +V+P P+ +E PTP Sbjct: 198 PPQVVDIPETPAVVPPIPTLVVPSPLTQPEVESPTP 233 >SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1597 Score = 28.7 bits (61), Expect = 4.0 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = +1 Query: 175 NGGISNDYGRNFRTINNDYGIRFDFAFLINDHWLGIYFDGRGS*CLVYINNNLN*GRSLA 354 N ISND N NN+ ++ IN++ Y G + NN N G S Sbjct: 339 NDDISNDGNLNGGGANNNNNKNNNYNSGINNNNNNNYNSGSSNGRNTNNGNNNNAGTSNV 398 Query: 355 GGDG-TNDDWGRRNGEVDDSGS 417 G +G TN+ NG ++ G+ Sbjct: 399 GNNGFTNNGVNNNNGNSNNGGN 420 >SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 308 Score = 28.3 bits (60), Expect = 5.3 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -2 Query: 300 PSPVEINPEPVIVDEESE-IKPD----PVIVVDGPEVTP 199 P P + P PV+V EE E +P P V DG E TP Sbjct: 229 PPPPRVVPLPVVVQEEQEQPRPRKSVLPARVADGTEATP 267 >SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1199 Score = 28.3 bits (60), Expect = 5.3 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -2 Query: 210 EVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDL 97 E TPV+ P V PEP P P P SP + P L Sbjct: 530 ETTPVLPL-PEKVTPEPGSTTPPSPPPDSPKSVAPPAL 566 >SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 587 Score = 28.3 bits (60), Expect = 5.3 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -2 Query: 303 TPSPVEINPEPVIVDEESEIK----PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEP 136 TP VE P P+ V +I+ P P V P++ P+ P V P+I P Sbjct: 450 TPPRVEHVPFPIPVHSPPQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQRFYYP 509 Query: 135 TPVS 124 PVS Sbjct: 510 VPVS 513 >SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081) Length = 185 Score = 28.3 bits (60), Expect = 5.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 340 GRSLAGGDGTNDDWGRRNGEVDDSGSVVD 426 G GGDG +DD G +G+ DD G V D Sbjct: 137 GSDGGGGDGEDDDGG--DGDDDDGGDVED 163 >SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) Length = 1079 Score = 28.3 bits (60), Expect = 5.3 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = -2 Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPA--IVL 169 P + V+VN P+ I P S IKP V P I+ P+ +V Sbjct: 89 PSKNLKVSVNPNNLSLPINITHVPNGTAGISVIKPVT-------RVQPQILRGPSQSVVN 141 Query: 168 PEPVIVAPIEPTPV 127 P P++ AP+EP+ V Sbjct: 142 PSPIVSAPVEPSSV 155 >SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17) Length = 1130 Score = 27.9 bits (59), Expect = 7.0 Identities = 20/52 (38%), Positives = 24/52 (46%) Frame = -2 Query: 213 PEVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDLPNPQ*VLDNMTTD 58 PE P +ADP +L + V V P EP P V AP Q + NM D Sbjct: 563 PEEDP--LADPIAMLTDEVQVPPAEPHPAPAVNHQAPG----QATIQNMVAD 608 >SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) Length = 1439 Score = 27.9 bits (59), Expect = 7.0 Identities = 16/75 (21%), Positives = 27/75 (36%) Frame = -2 Query: 312 QALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPT 133 Q + PS P S + P P + PV+ P++ + P++ Sbjct: 322 QMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTPVKAP 381 Query: 132 PVSPVIIGAPDLPNP 88 P S V + +P P Sbjct: 382 PPS-VFASSSGVPTP 395 >SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27) Length = 1154 Score = 27.9 bits (59), Expect = 7.0 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = -2 Query: 237 DPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPV 127 +P+++++ P+ + +I P+ V P+ PTPV Sbjct: 1098 EPILLLEEPDSSAAVITQQDTGQPKQSEVEPVSPTPV 1134 >SB_33933| Best HMM Match : T-box (HMM E-Value=0) Length = 402 Score = 27.9 bits (59), Expect = 7.0 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = -1 Query: 496 GRPCSHPTRAYRRRTCNHQRIRANRQRTRYR 404 G C+ + Y RR CN ++ R+ RY+ Sbjct: 349 GTDCASREKRYERRRCNQNKMAVARECARYQ 379 >SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) Length = 2565 Score = 27.9 bits (59), Expect = 7.0 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 472 RAYRRRTCNHQRIRANRQRTRYRRLPRSSFPSRHWSHRPR 353 R RRR +R R R+R R R+ R R + HR R Sbjct: 1470 RRIRRRRRRKRRRRRRRRRRRRRQQKRQRRKQRRYQHRRR 1509 >SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) Length = 356 Score = 27.9 bits (59), Expect = 7.0 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = -2 Query: 330 IIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEVTPVIIADPAIVLPEPVI 154 I+++ + P E+ P IV + I P I+ P PV++ PAI+ +P I Sbjct: 150 IVIHRPPIIYHPPPEVYHRPDIVVHRAPIMLHRPAIIYHQP---PVVVHRPAIIYHQPPI 206 Query: 153 VAPIEPTPVSPVIIGAPD 100 V P V+ I+ + D Sbjct: 207 VFHQPPPVVNQPILHSHD 224 >SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) Length = 1249 Score = 27.5 bits (58), Expect = 9.2 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = -2 Query: 276 EPVIVDEESEIKPDP----VIVVDGPEVTPVIIADPAI 175 +P+I+D E E+KP P V+ D P P I+D ++ Sbjct: 1117 KPIILDPEMELKPLPGKPLVLPSDDPSQPPSYISDTSL 1154 >SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0) Length = 374 Score = 27.5 bits (58), Expect = 9.2 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = -2 Query: 264 VDEESEIKPDPVIVVDGPEVTPVII-ADPAIVLPEPVIVAPIEPTPVSPVIIGAPD 100 +DEE + + I+ E I A PA EP P+EPTP P PD Sbjct: 301 LDEELRLSMEKEIMARAAEQKKKIEEATPAPPPEEPKQETPVEPTPEVPAETPKPD 356 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,721,113 Number of Sequences: 59808 Number of extensions: 361527 Number of successful extensions: 1514 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 1217 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1464 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1524174750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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