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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m14r
         (619 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)                 40   0.002
SB_39126| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     36   0.026
SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)                   35   0.061
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)                   34   0.11 
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_18101| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.19 
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)              33   0.25 
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)                       32   0.32 
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.43 
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.43 
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.75 
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)              31   0.75 
SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29)               31   0.99 
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)              31   0.99 
SB_44592| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.3  
SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)                   30   1.3  
SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)                   30   1.3  
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)                   30   1.3  
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)                 30   1.3  
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)                 29   2.3  
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     29   3.0  
SB_6983| Best HMM Match : rve (HMM E-Value=0.011)                      29   3.0  
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.3  
SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081)             28   5.3  
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)               28   5.3  
SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)                 28   7.0  
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)            28   7.0  
SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27)                 28   7.0  
SB_33933| Best HMM Match : T-box (HMM E-Value=0)                       28   7.0  
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)                    28   7.0  
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)                     28   7.0  
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)                     27   9.2  
SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0)              27   9.2  

>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
          Length = 439

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 282 NPEPVIVDEESEIKPDPVIVVDGP-EVTPVIIADPAIVLPEPVIV-APIEPTPVSPVIIG 109
           NP  V+    ++  P P +V + P  V P ++ D    +P PV+  AP    P  PV+  
Sbjct: 52  NPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPP--PVVTD 109

Query: 108 APDLPNPQ*VLDNMTT 61
           AP    P  V D  TT
Sbjct: 110 APTTVPPPVVTDAPTT 125



 Score = 36.3 bits (80), Expect = 0.020
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
 Frame = -2

Query: 300 PSPVEIN-----PEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIV-APIE 139
           PS VE+      P P +V E     P PV+      V P ++ D    +P PV+  AP  
Sbjct: 54  PSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDAPTT 113

Query: 138 PTPVSPVIIGAPDLPNP 88
             P  PV+  AP    P
Sbjct: 114 VPP--PVVTDAPTTVPP 128



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGPE-VTPVIIADPAIVLPEPVIVAPIEPTP 130
           +T +P  + P PV+ D  + + P   +V D P  V P ++ D    +P P  V P EP  
Sbjct: 83  VTDAPTTV-PPPVVTDAPTTVPPP--VVTDAPTTVPPPVVTDAPTTVPPP--VQPTEPPS 137

Query: 129 VSPVIIG 109
             P  IG
Sbjct: 138 TRPPPIG 144



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 22/71 (30%), Positives = 27/71 (38%)
 Frame = -2

Query: 273 PVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDLP 94
           PV+ +  +   P P      P   PV   DP    P  V V   +  P  PV+  AP   
Sbjct: 22  PVLTEAATTQPPAPP---PEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV 78

Query: 93  NPQ*VLDNMTT 61
            P  V D  TT
Sbjct: 79  PPPVVTDAPTT 89


>SB_39126| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 106

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEES-EIKPDPVIVVDGPEVTPVII-ADPAI--VLPEPVIVAPIE 139
           L P P EI+P P  VD  S EI P P      P++ P++   DP +  + P P  + PI+
Sbjct: 13  LEPIPPEIDPIPPEVDTISPEIDPIP------PDINPILPEVDPILPEIDPIPPDITPID 66

Query: 138 PTP--VSPV-IIGAPDLPNPQ*VLDNM 67
           PTP    P+  +  P  PN + + D++
Sbjct: 67  PTPPCADPIPAVADPIPPNMEPIPDSI 93


>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 4303

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
 Frame = -2

Query: 345  SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKP---------DPVIVVDGPEVT 202
            +P V+ IVNV+       V+++    EP++  +   I+P         +P + VDGP V 
Sbjct: 4077 APTVEPIVNVDAPTIEPIVKVDAPAVEPIVTVDVPTIEPTTSVDAPSNEPTVGVDGPTVE 4136

Query: 201  PVIIADPAIVLPEPVIVAP-IEPT 133
            P++  D   + P   + AP +EPT
Sbjct: 4137 PIVSVDALTIEPIVKVDAPAVEPT 4160



 Score = 31.5 bits (68), Expect = 0.57
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = -2

Query: 345  SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175
            +P V+ IV V+       V ++    EP++  +   I  +P++ VD P V P++  D   
Sbjct: 4055 APTVEQIVIVDAHTIEPIVRVDAPTVEPIVNVDAPTI--EPIVKVDAPAVEPIVTVDVPT 4112

Query: 174  VLPEPVIVAPI-EPT 133
            + P   + AP  EPT
Sbjct: 4113 IEPTTSVDAPSNEPT 4127



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = -2

Query: 342  PLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIV 172
            P ++ I  V+       V ++    EP++  + + +  +P+I V  P + P++  D   V
Sbjct: 2925 PTIESIFRVDTPAVKPIVSVDAPTIEPIVRVDATTV--EPIISVHAPTIEPIVRVDAPTV 2982

Query: 171  LPEPVIVAP-IEP 136
             P   + AP IEP
Sbjct: 2983 KPSVSVDAPTIEP 2995



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 345  SPLVQIIVNVNQALTPSPVEINP---EPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175
            +P ++ IV V+       V ++    EP++      +  +P++ VD   + P++  D   
Sbjct: 2968 APTIEPIVRVDAPTVKPSVSVDAPTIEPIV--RVDALTVEPIVSVDAHTIEPIVRVDGPA 3025

Query: 174  VLPEPVIVAPI-EPT 133
            V P   + AP  EPT
Sbjct: 3026 VEPIVSVDAPSNEPT 3040


>SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)
          Length = 1188

 Score = 34.7 bits (76), Expect = 0.061
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
 Frame = -2

Query: 462 DVEPAIINEFEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPSPV-E 286
           +VEP + +  EP+   PA+++                   P++   V    +    PV  
Sbjct: 513 NVEPVLASNVEPVLVSPALLNQCSSAMSNQCSASLASIVEPVLASNVEPVLSSNVEPVLS 572

Query: 285 INPEPVIVDEESEIKPDPVIVVDGPEVTPVI--IADPAIV-LPEPVIVAPIEP 136
            N EPV+V     +    V  V    V PV+  I +P +  + EPV+ + +EP
Sbjct: 573 SNVEPVLVSSVEPVLASNVEPVLASIVEPVLASIVEPVLASIVEPVLASIVEP 625


>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
          Length = 631

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 25/71 (35%), Positives = 28/71 (39%)
 Frame = -2

Query: 300 PSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVSP 121
           PSP    P P    E   + P P  V   PE  P     P    PEPV  AP  P P + 
Sbjct: 143 PSP----PNPTEAPEPETVPPQPETVPPQPETVP---PQPGSEEPEPVSQAPEPPKPKT- 194

Query: 120 VIIGAPDLPNP 88
               AP+ P P
Sbjct: 195 ---SAPEPPKP 202


>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2388

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -2

Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPV--IIADPAIVL 169
           P++    N+  +  P P+   P P +    +   P P+I   GP   P   +I  P   +
Sbjct: 349 PVIVPPPNLLFSFPPPPIIPIPPPAMPAMFNPHVPPPMI---GPVTVPPPPLIPPPQASI 405

Query: 168 PEPVIVAPIEPTPVSPVIIGAPDLPN 91
           P P ++  + P  V P  IG P+ P+
Sbjct: 406 PPPTMIQTLPPPSVPPPPIGVPNRPS 431


>SB_18101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
 Frame = -2

Query: 336 VQIIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIAD-PAIV 172
           +++I +  + +  SP  I+  P ++D+  E+  D P ++ D PEV   +P +I D P ++
Sbjct: 10  LEVIDDSPEVIDDSPEVIDGSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVI 69

Query: 171 LPEPVIV 151
              P ++
Sbjct: 70  DDSPEVI 76



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = -2

Query: 471 EPIDVEPAIINEF-EPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPS 295
           E ID  P +I++  E ID  P ++D                  SP  ++I +  + +  S
Sbjct: 11  EVIDDSPEVIDDSPEVIDGSPEVID----------DSPEVIDDSP--EVIDDSPEVIDDS 58

Query: 294 PVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIADPAIVLPE 163
           P  I+  P ++D+  E+  D P ++ D  EV   +P +I D + V+ +
Sbjct: 59  PEVIDDSPEVIDDSPEVIDDSPKVIDDSREVFDDSPEVIDDSSEVIDD 106



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = -2

Query: 453 PAIINE-FEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALTPSPVEINP 277
           P +I++  E ID+ P ++D                  SP  ++I +  + +  SP  I+ 
Sbjct: 3   PEVIDDSLEVIDDSPEVID---DSPEVIDGSPEVIDDSP--EVIDDSPEVIDDSPEVIDD 57

Query: 276 EPVIVDEESEIKPD-PVIVVDGPEV 205
            P ++D+  E+  D P ++ D P+V
Sbjct: 58  SPEVIDDSPEVIDDSPEVIDDSPKV 82


>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
          Length = 2735

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = -2

Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEV----TPVIIADPAIVLPEPVIV--APIEPT 133
           P+   P P +      I P P ++V  P V     P+++  P IV   P +V  API   
Sbjct: 435 PLVYTPSPDVFANPPVIVPQPAVIVQRPPVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHM 494

Query: 132 PV 127
           PV
Sbjct: 495 PV 496



 Score = 32.3 bits (70), Expect = 0.32
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = -2

Query: 303 TPSP-VEINPEPVIVDEESEI-KPDPVIVVDGPEVT---PVIIADPAIVLPEPVIVAPI 142
           TPSP V  NP PVIV + + I +  PV+    P V    P++   P +V+P P+   P+
Sbjct: 439 TPSPDVFANP-PVIVPQPAVIVQRPPVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHMPV 496



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -2

Query: 294  PVEINPEPVIVDEESEIKPDPVIVVDGPEVT----PVIIADPAIVLPEPVIVAPIEPTPV 127
            P+  +P P +      +   P IV+  P V     PV++  PA+V  +P +V    P  V
Sbjct: 1359 PIIYHPPPEVYHRPDVVLHRPDIVIHRPSVVLHQAPVVVHRPAVVYHQPPVVVHQPPPLV 1418

Query: 126  SPVIIGAPD 100
               II + D
Sbjct: 1419 HQPIIHSHD 1427



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = -2

Query: 351  QASPLVQIIVNVNQALTPSPVEINPEP-VIVDEESEIKPDPVIVVDGPEVTPVIIADPAI 175
            +AS    I+VN    +   P E+   P ++V     +   P I+   P   PVI+  PA+
Sbjct: 1508 KASKKNDIVVNRPPIIYHPPPEVYHRPDIVVHRAPIVLHRPPIIYHQP---PVIVHRPAV 1564

Query: 174  VLPEPVIVAPIEPTPVSPVIIGAPD 100
            V  +P IV    P  V   ++ + D
Sbjct: 1565 VYHQPPIVFHQPPPAVHQPVLHSHD 1589



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -2

Query: 330 IIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEVTPVIIADPAIVLPEPVI 154
           ++VN    +   P E+   P IV   + I    P IV   P   PV++  PA+V  +P I
Sbjct: 19  VVVNRPPIIYHPPPEVYHRPEIVVHRAPILIHRPPIVYHQP---PVVVHRPAVVYHQPPI 75

Query: 153 VAPIEPTPVSPVIIGAPD 100
           V    P  V+  ++ + D
Sbjct: 76  VFHQPPPAVNQPMLYSHD 93


>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
          Length = 315

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
 Frame = -2

Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIA--DPAIVLPEPVIVAPIEPTPVSP 121
           P    P P+   +    +P P+  +D P   P  I   DP    P P+   P  P P   
Sbjct: 176 PPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIFPQPTTPAPTKC 235

Query: 120 VIIGAPD 100
            +I   +
Sbjct: 236 QVINTKE 242



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
 Frame = -2

Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVII--ADPAIVLPEPVIVAPIEPTPVS- 124
           P    P P+   +    +P P+  +D P   P  I   DP    P P  + PI+P     
Sbjct: 163 PPRTQPPPIFPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPP--IPPIDPPRTQP 220

Query: 123 PVIIGAPDLPNP 88
           P I   P  P P
Sbjct: 221 PPIFPQPTTPAP 232


>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2332

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 23/79 (29%), Positives = 36/79 (45%)
 Frame = -2

Query: 324  VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAP 145
            V++ ++ TP+P   +P P         KP PV  +   +     I+ P    P PV+   
Sbjct: 934  VDIMRSPTPTPPP-SPPPKEPTPPPSSKPSPVKEIKPKKPIEKFISRPKPPTPPPVVSPH 992

Query: 144  IEPTPVSPVIIGAPDLPNP 88
             +  P+SPV  GA +L  P
Sbjct: 993  KQTRPISPV--GASNLYKP 1009


>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1268

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
 Frame = -2

Query: 300 PSPVEI-NPEPVIVDEESEIKPDPVIV------VDGPEVTPVIIADPAIVLPEPVIVAPI 142
           P P+++ +P PV   + +   PDP+ V      +D P  TPV      I +P+P  V  +
Sbjct: 391 PGPIDMPDPTPVPKVQTTIDMPDPIPVPKVQTTIDMPGPTPVPKVQTTIDMPDPTPVPKV 450

Query: 141 EPTPVSPVIIGAPDLPNPQ*VLDNMTTDIV 52
           + T   P   G   +P  Q  +D  T+ ++
Sbjct: 451 QTTIDMP---GPTPVPKVQTTIDISTSTLL 477



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -2

Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVS 124
           P P+ +      +D    I  P     VD P  TPV      I +P P+ V  ++ T   
Sbjct: 331 PDPIPVPKVQTNIDMPDPIPVPKVQTTVDMPGPTPVPKVQTTIDMPGPIPVPKVQTTIDM 390

Query: 123 PVIIGAPDLPNP 88
           P  I  PD P P
Sbjct: 391 PGPIDMPD-PTP 401



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
 Frame = -2

Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIE----- 139
           P P+ +      +D    I  P     +D P  TPV      I +P+P+ V  ++     
Sbjct: 286 PDPIPVPKVQTTIDMPDPIPVPKVQATIDMPGPTPVPKVQTTIDMPDPIPVPKVQTNIDM 345

Query: 138 PTPVS-PVIIGAPDLPNPQ*VLDNMTT 61
           P P+  P +    D+P P  V    TT
Sbjct: 346 PDPIPVPKVQTTVDMPGPTPVPKVQTT 372



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
 Frame = -2

Query: 300 PSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPVS 124
           P P+ +      +D    I  P     +D P  TPV      I +P+P+ V  ++ T   
Sbjct: 226 PGPIPVPKVQTTIDMPGPIPVPKVQTNIDMPGPTPVPKVQATIDMPDPIPVPKVQTTIDM 285

Query: 123 PVIIGAP------DLPNP 88
           P  I  P      D+P+P
Sbjct: 286 PDPIPVPKVQTTIDMPDP 303



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -2

Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIK-PDPVIVVDGPEVTPVIIADPAIVLP 166
           P+ ++  N++    P P+ +      VD       P     +D P   PV      I +P
Sbjct: 335 PVPKVQTNIDM---PDPIPVPKVQTTVDMPGPTPVPKVQTTIDMPGPIPVPKVQTTIDMP 391

Query: 165 EPVIVAPIEPTPVSPVIIGAPDLPNP 88
            P+ +   +PTPV P +    D+P+P
Sbjct: 392 GPIDMP--DPTPV-PKVQTTIDMPDP 414


>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 682

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -2

Query: 327 IVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVA 148
           I  + + L   P E + EP+ V  ESE + +       P++ P     PA +   P + +
Sbjct: 415 IEEIRKRLVDMPAEDDNEPMQVSRESEREEEDSSDGFKPKLQPTFQPAPAHIETAPKVRS 474

Query: 147 PI-EPTPVSPV 118
           P  + TPV PV
Sbjct: 475 PSPDLTPVQPV 485


>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
          Length = 391

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGP---EVTPVIIADPAIVLPEPVIVAPIEP 136
           + P PV+I P PV      +I+P PV +   P   +  PV I  P + + +P +   I+P
Sbjct: 290 IQPPPVDIQPPPV------DIQPPPVDIQQPPVDIQPPPVDIQPPPVDIQQPPV--DIQP 341

Query: 135 TPV 127
            PV
Sbjct: 342 PPV 344



 Score = 30.7 bits (66), Expect = 0.99
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEES-EIKPDPVIVVDGP---EVTPVIIADPAIVLPEP 160
           + P PV+I P PV + +   +I+P PV +   P   +  PV I  P + + +P
Sbjct: 297 IQPPPVDIQPPPVDIQQPPVDIQPPPVDIQPPPVDIQQPPVDIQPPPVDIQQP 349


>SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
          Length = 1841

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -2

Query: 291  VEINPEPVI--VDEESEIKPDPVIVVDGPEVTPVIIADPAIVLP-EPV-IVAPIEPTPVS 124
            V + P PV+     +  +  +P+ VV    V PV+  +P  V+P  PV +V  +EP PV 
Sbjct: 1757 VGMEPNPVVPYAPVQPMVGMEPLPVVPYAPVQPVVGMEPRTVVPYAPVQLVVGMEPRPVV 1816

Query: 123  P 121
            P
Sbjct: 1817 P 1817


>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
          Length = 1099

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -2

Query: 294 PVEINPEPVIVDEESEIKPDPVIVVDGPEVT----PVIIADPAIVLPEPVIVAPIEPTPV 127
           P+  +P P I      +   P +V+  P +     PVI+  PA+V  +P I+    P  V
Sbjct: 148 PIIYHPPPEIYHRPDIVVHRPPLVIHRPPIIYHQPPVIVHRPAVVYHQPPIIFHQPPPAV 207

Query: 126 SPVIIGAPD 100
           S  ++ + D
Sbjct: 208 SQPLLFSHD 216


>SB_44592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 185

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = -2

Query: 333 QIIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV---TPVIIAD 184
           ++I +  + +  SP  I+  P ++D+  E+  D P ++ D PEV   +P +I D
Sbjct: 78  EVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPEVIDDSPKVIDD 131



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = -2

Query: 480 ILHEPIDVEPAIINEFEPIDNGPAIVDFXXXXXXXXXXXXXXGQASPLVQIIVNVNQALT 301
           I+H  +D      +  E ID+ P ++D                  SP  ++I +  + + 
Sbjct: 62  IIHSFLDSPEVTYDSPEVIDDSPEVID---DSPEVIDDSPEVIDDSP--EVIDDSPEVID 116

Query: 300 PSPVEINPEPVIVDEESEIKPD-PVIVVDGPEV 205
            SP  I+  P ++D+  E+  D P ++ D  EV
Sbjct: 117 DSPEVIDDSPKVIDDSREVFDDSPEVIDDSSEV 149


>SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = -2

Query: 348  ASPLVQIIVNVNQALTPSPVEINPEPVIVDEE----SEIKPDPVIVVDGPEVTPVIIADP 181
            A P V++I +   A  P P    P P I  ++    S +   P    D P+  P++ A P
Sbjct: 817  APPFVKLIASAMAAAFPFPFNPAPAPPITPDDTITRSAVHNLPPCPPDPPQRLPLVEACP 876

Query: 180  AIVLPEPVIVAPIEPTP 130
                 +P I  P  P P
Sbjct: 877  GSPSVKPAIDWPPPPPP 893


>SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)
          Length = 331

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -2

Query: 324 VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVT--PVIIADPAIVLPEPVIV 151
           V+   A    P E++ +PV   E SE+   PV  V+  EV+  P    +P  V  +P  V
Sbjct: 35  VSAKPACNVEPGEVSAKPVGDVEPSEVFAKPVGDVEPGEVSAKPAGDVEPGEVSAKP--V 92

Query: 150 APIEPTPVSPVIIG 109
             +EP+ VS  + G
Sbjct: 93  GDVEPSEVSAKLAG 106


>SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)
          Length = 300

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -2

Query: 324 VNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVT--PVIIADPAIVLPEPVIV 151
           V+   A    P E++ +PV   E SE+   PV  V+  EV+  P    +P  V  +P  V
Sbjct: 73  VSAKPACNVEPGEVSAKPVGDVEPSEVFAKPVGDVEPGEVSAKPAGDVEPGEVSAKP--V 130

Query: 150 APIEPTPVSPVIIG 109
             +EP+ VS  + G
Sbjct: 131 GDVEPSEVSAKLAG 144


>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
          Length = 1197

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPV 127
           L P   +   EP+ ++ +S   P+P   V+      + +  P      P  ++P  P P+
Sbjct: 802 LDPDSTKKPTEPIYINRKSLSSPEPESAVELSRPDSLTMEAPTTKTDRP--LSPSAPPPL 859

Query: 126 SPVIIGAP 103
            P  +GAP
Sbjct: 860 PPRPVGAP 867


>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
          Length = 305

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
 Frame = -2

Query: 345 SPLVQIIVNVNQALTPSPVEI-NPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVL 169
           +P  Q   +    L P+ VE   P P++    +   P P    + P   P     P    
Sbjct: 75  APTPQTQASTAPPLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPT--- 131

Query: 168 PEPVIVAPIEPTPVSPVIIGAPDLP 94
             P   AP  P P++P   G P  P
Sbjct: 132 -SPATRAPPPPPPIAPATGGPPPPP 155


>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 548

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = -1

Query: 592 SRSKDEIPDHCRYHSRHGFRRACQPRPGDAWLGRPCSHPTRAYRRRTCNHQRIRANRQRT 413
           SR +       R  SR  +R     +     L R     +R+Y R + +  R R +R RT
Sbjct: 155 SRPRSRYRGRSRSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPSPYRSRRSRSRT 214

Query: 412 RYRRLPRSSFPSRHWSHRPR 353
           R  R       SR    RPR
Sbjct: 215 RRSRSRSRRSRSRSRDRRPR 234


>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
          Length = 1258

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 186 DPAIVLPEPVIVAPIEPTPVSP 121
           +PA + P P+   PI PTP++P
Sbjct: 200 NPAAINPTPINPTPINPTPINP 221


>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 928

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 306 LTPSPVEINPEPVIVDEESEIKPDPVIV--VDGPEVTPVIIADPAIVLPEPVIVAPIEPT 133
           L  S + I  EP+  +E S   P+P ++  ++   +   ++  P I + +  +  PI+  
Sbjct: 38  LADSILNIKAEPIDAEESSGCMPNPSLIANINKESIEDELLDTPTINIKQEPLEEPIDEC 97

Query: 132 PV 127
           PV
Sbjct: 98  PV 99


>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
          Length = 251

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 234 PVIVVDGPEVTPVIIADPAIVLPEPVIVAPIE-PTP 130
           P  VVD PE   V+   P +V+P P+    +E PTP
Sbjct: 198 PPQVVDIPETPAVVPPIPTLVVPSPLTQPEVESPTP 233


>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1597

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 175 NGGISNDYGRNFRTINNDYGIRFDFAFLINDHWLGIYFDGRGS*CLVYINNNLN*GRSLA 354
           N  ISND   N    NN+     ++   IN++    Y  G  +       NN N G S  
Sbjct: 339 NDDISNDGNLNGGGANNNNNKNNNYNSGINNNNNNNYNSGSSNGRNTNNGNNNNAGTSNV 398

Query: 355 GGDG-TNDDWGRRNGEVDDSGS 417
           G +G TN+     NG  ++ G+
Sbjct: 399 GNNGFTNNGVNNNNGNSNNGGN 420


>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = -2

Query: 300 PSPVEINPEPVIVDEESE-IKPD----PVIVVDGPEVTP 199
           P P  + P PV+V EE E  +P     P  V DG E TP
Sbjct: 229 PPPPRVVPLPVVVQEEQEQPRPRKSVLPARVADGTEATP 267


>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1199

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 210 EVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDL 97
           E TPV+   P  V PEP    P  P P SP  +  P L
Sbjct: 530 ETTPVLPL-PEKVTPEPGSTTPPSPPPDSPKSVAPPAL 566


>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 587

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
 Frame = -2

Query: 303 TPSPVEINPEPVIVDEESEIK----PDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEP 136
           TP  VE  P P+ V    +I+    P P  V   P++ P+    P  V   P+I     P
Sbjct: 450 TPPRVEHVPFPIPVHSPPQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQRFYYP 509

Query: 135 TPVS 124
            PVS
Sbjct: 510 VPVS 513


>SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081)
          Length = 185

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 340 GRSLAGGDGTNDDWGRRNGEVDDSGSVVD 426
           G    GGDG +DD G  +G+ DD G V D
Sbjct: 137 GSDGGGGDGEDDDGG--DGDDDDGGDVED 163


>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
          Length = 1079

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = -2

Query: 342 PLVQIIVNVNQALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPA--IVL 169
           P   + V+VN      P+ I   P      S IKP          V P I+  P+  +V 
Sbjct: 89  PSKNLKVSVNPNNLSLPINITHVPNGTAGISVIKPVT-------RVQPQILRGPSQSVVN 141

Query: 168 PEPVIVAPIEPTPV 127
           P P++ AP+EP+ V
Sbjct: 142 PSPIVSAPVEPSSV 155


>SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)
          Length = 1130

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -2

Query: 213 PEVTPVIIADPAIVLPEPVIVAPIEPTPVSPVIIGAPDLPNPQ*VLDNMTTD 58
           PE  P  +ADP  +L + V V P EP P   V   AP     Q  + NM  D
Sbjct: 563 PEEDP--LADPIAMLTDEVQVPPAEPHPAPAVNHQAPG----QATIQNMVAD 608


>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
          Length = 1439

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/75 (21%), Positives = 27/75 (36%)
 Frame = -2

Query: 312 QALTPSPVEINPEPVIVDEESEIKPDPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPT 133
           Q + PS     P        S + P P +        PV+   P++      +  P++  
Sbjct: 322 QMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTPVKAP 381

Query: 132 PVSPVIIGAPDLPNP 88
           P S V   +  +P P
Sbjct: 382 PPS-VFASSSGVPTP 395


>SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27)
          Length = 1154

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -2

Query: 237  DPVIVVDGPEVTPVIIADPAIVLPEPVIVAPIEPTPV 127
            +P+++++ P+ +  +I       P+   V P+ PTPV
Sbjct: 1098 EPILLLEEPDSSAAVITQQDTGQPKQSEVEPVSPTPV 1134


>SB_33933| Best HMM Match : T-box (HMM E-Value=0)
          Length = 402

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 496 GRPCSHPTRAYRRRTCNHQRIRANRQRTRYR 404
           G  C+   + Y RR CN  ++   R+  RY+
Sbjct: 349 GTDCASREKRYERRRCNQNKMAVARECARYQ 379


>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
          Length = 2565

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 472  RAYRRRTCNHQRIRANRQRTRYRRLPRSSFPSRHWSHRPR 353
            R  RRR    +R R  R+R R R+  R     R + HR R
Sbjct: 1470 RRIRRRRRRKRRRRRRRRRRRRRQQKRQRRKQRRYQHRRR 1509


>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
          Length = 356

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -2

Query: 330 IIVNVNQALTPSPVEINPEPVIVDEESEIKPD-PVIVVDGPEVTPVIIADPAIVLPEPVI 154
           I+++    +   P E+   P IV   + I    P I+   P   PV++  PAI+  +P I
Sbjct: 150 IVIHRPPIIYHPPPEVYHRPDIVVHRAPIMLHRPAIIYHQP---PVVVHRPAIIYHQPPI 206

Query: 153 VAPIEPTPVSPVIIGAPD 100
           V    P  V+  I+ + D
Sbjct: 207 VFHQPPPVVNQPILHSHD 224


>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
          Length = 1249

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -2

Query: 276  EPVIVDEESEIKPDP----VIVVDGPEVTPVIIADPAI 175
            +P+I+D E E+KP P    V+  D P   P  I+D ++
Sbjct: 1117 KPIILDPEMELKPLPGKPLVLPSDDPSQPPSYISDTSL 1154


>SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0)
          Length = 374

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -2

Query: 264 VDEESEIKPDPVIVVDGPEVTPVII-ADPAIVLPEPVIVAPIEPTPVSPVIIGAPD 100
           +DEE  +  +  I+    E    I  A PA    EP    P+EPTP  P     PD
Sbjct: 301 LDEELRLSMEKEIMARAAEQKKKIEEATPAPPPEEPKQETPVEPTPEVPAETPKPD 356


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,721,113
Number of Sequences: 59808
Number of extensions: 361527
Number of successful extensions: 1514
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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