Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m13r
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +1

Query: 349 AIFQFDKHRVVLRCP*QR*RQHFDVMINFVLKFIIYLY*KFIFLLSRCLVYCQLL 513
           A   F+ H + L C       +F + + F L  I Y Y  FI      L YC L+
Sbjct: 185 AFIFFNMHLLFLLC-----LDYFTLHLLF-LPCIYYFYSAFIIFTIHLLFYCVLI 233


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -2

Query: 324  SCDNWMNINLREVICTSR 271
            +CD   N+N+ +++ T++
Sbjct: 1327 TCDGTSNVNVVDIVTTAK 1344


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 394 TDSAEPPYACRIEK 353
           T S E PY CR+ K
Sbjct: 71  THSGERPYRCRLCK 84


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 394 TDSAEPPYACRIEK 353
           T S E PY CR+ K
Sbjct: 327 THSGERPYRCRLCK 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,025
Number of Sequences: 336
Number of extensions: 2203
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)