Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11r
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358...    30   2.3  
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157...    30   2.3  
08_02_0955 + 22994266-22995630                                         29   3.0  
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847...    29   4.0  
08_02_0796 - 21300251-21300373,21300846-21301721                       28   7.0  
12_02_0132 - 14054331-14054969                                         28   9.3  

>06_03_0749 +
           24133302-24134274,24134585-24135272,24135751-24135857,
           24137565-24137815
          Length = 672

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 755 YKEPTIRKXXEKRALPGWSCEGCKNFYGELYKD 657
           Y EP +RK  ++  L G  C+ CK FY  +  D
Sbjct: 496 YTEP-VRKKADRENLKGVECKQCKKFYDAVLPD 527


>01_07_0197 + 41912207-41912652,41913226-41913800,41913828-41915748,
            41915836-41916049,41916143-41916394,41916469-41916528,
            41916646-41916776,41916898-41917012,41917084-41917239
          Length = 1289

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 623  CSKHRGRHNPERPKTPPNYWNPRWNVPEDTEEL 525
            C  H     PE    P N  NP+W VP+D  EL
Sbjct: 1015 CGNHYEMQTPETRARPENP-NPKWPVPKDLIEL 1046


>08_02_0955 + 22994266-22995630
          Length = 454

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 605 RHNPERPKTPPNYWNPR 555
           +H+PE+ K PP  WNP+
Sbjct: 180 QHSPEQHKRPPRVWNPQ 196


>06_03_1011 -
           26882011-26882157,26882576-26884248,26884607-26884783,
           26885313-26885416,26885896-26886032
          Length = 745

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 587 PKTPPNYWNPRWNVPEDTEE 528
           P  PPNYW   W + + +EE
Sbjct: 434 PLNPPNYWEETWKILQMSEE 453


>08_02_0796 - 21300251-21300373,21300846-21301721
          Length = 332

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = -1

Query: 716 ALPGWSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHN--PERPKTPP 573
           +L G + +GC  F      D     + K   C  HR  H   PE P +PP
Sbjct: 49  SLGGHAVDGCGEFMPSPAADAADPASLKCAACGCHRNFHRRLPEAPPSPP 98


>12_02_0132 - 14054331-14054969
          Length = 212

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 585 QNPAELLEPEVERTRGHGGTQSNEQC--CVDYCIRGEGV 475
           Q   E   P  E ++G GG    EQC  C+    RGE V
Sbjct: 130 QEDVEAAIPAFEYSKGSGGAAEAEQCAVCIGVVRRGETV 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,685,057
Number of Sequences: 37544
Number of extensions: 470521
Number of successful extensions: 1177
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)