Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10m11r
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72066-1|AAC14371.1| 897|Homo sapiens CtBP interacting protein ... 49 2e-05
BC030590-1|AAH30590.1| 902|Homo sapiens RBBP8 protein protein. 49 2e-05
AF043431-1|AAC34368.1| 897|Homo sapiens retinoblastoma-interact... 49 2e-05
BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase w... 31 4.5
AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and ... 31 4.5
AF261918-1|AAF89106.1| 1072|Homo sapiens disintegrin metalloprot... 31 4.5
AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein. 31 4.5
BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein... 30 7.9
BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein... 30 7.9
AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related pr... 30 7.9
AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein... 30 7.9
>U72066-1|AAC14371.1| 897|Homo sapiens CtBP interacting protein
CtIP protein.
Length = 897
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = -1
Query: 740 IRKXXEKRALPGWSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHNPERPKTPPNYW 564
+RK E+R L G +C+ C+ +Y ++ ++ KK+ CS+HR R+ P P TP N+W
Sbjct: 799 VRKKEERRKLLGHTCKECEIYYADMPAEE---REKKLASCSRHRFRYIP--PNTPENFW 852
>BC030590-1|AAH30590.1| 902|Homo sapiens RBBP8 protein protein.
Length = 902
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = -1
Query: 740 IRKXXEKRALPGWSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHNPERPKTPPNYW 564
+RK E+R L G +C+ C+ +Y ++ ++ KK+ CS+HR R+ P P TP N+W
Sbjct: 804 VRKKEERRKLLGHTCKECEIYYADMPAEE---REKKLASCSRHRFRYIP--PNTPENFW 857
>AF043431-1|AAC34368.1| 897|Homo sapiens retinoblastoma-interacting
protein protein.
Length = 897
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = -1
Query: 740 IRKXXEKRALPGWSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHNPERPKTPPNYW 564
+RK E+R L G +C+ C+ +Y ++ ++ KK+ CS+HR R+ P P TP N+W
Sbjct: 799 VRKKEERRKLLGHTCKECEIYYADMPAEE---REKKLASCSRHRFRYIP--PNTPENFW 852
>BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 9 protein.
Length = 1935
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 626 ECSKHRGRHNPERPKTPPNYWNPRWNVPEDTEELN 522
+ S+H+ RH+ ++ KT W R N+ D LN
Sbjct: 224 DTSEHKNRHSKDKKKTRARKWGERINLAGDVAALN 258
>AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and
metalloprotease with thrombospondin type 1 motifs 9B
protein.
Length = 1935
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 626 ECSKHRGRHNPERPKTPPNYWNPRWNVPEDTEELN 522
+ S+H+ RH+ ++ KT W R N+ D LN
Sbjct: 224 DTSEHKNRHSKDKKKTRARKWGERINLAGDVAALN 258
>AF261918-1|AAF89106.1| 1072|Homo sapiens disintegrin
metalloproteinase with thrombospondin repeats protein.
Length = 1072
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 626 ECSKHRGRHNPERPKTPPNYWNPRWNVPEDTEELN 522
+ S+H+ RH+ ++ KT W R N+ D LN
Sbjct: 224 DTSEHKNRHSKDKKKTRARKWGERINLAGDVAALN 258
>AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein.
Length = 1471
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 626 ECSKHRGRHNPERPKTPPNYWNPRWNVPEDTEELN 522
+ S+H+ RH+ ++ KT W R N+ D LN
Sbjct: 66 DTSEHKNRHSKDKKKTRARKWGERINLAGDVAALN 100
>BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 347 KCATHLEM*VLRPQYSYNGCPTLQTETHYCFTAEIDGVVVPTRAD 213
+C+ + + +L+ + S PT + CFT EID + V R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271
>BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 347 KCATHLEM*VLRPQYSYNGCPTLQTETHYCFTAEIDGVVVPTRAD 213
+C+ + + +L+ + S PT + CFT EID + V R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271
>AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related protein
6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 347 KCATHLEM*VLRPQYSYNGCPTLQTETHYCFTAEIDGVVVPTRAD 213
+C+ + + +L+ + S PT + CFT EID + V R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271
>AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein
receptor-related protein 6 variant protein.
Length = 1477
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 347 KCATHLEM*VLRPQYSYNGCPTLQTETHYCFTAEIDGVVVPTRAD 213
+C+ + + +L+ + S PT + CFT EID + V R D
Sbjct: 1091 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,198,953
Number of Sequences: 237096
Number of extensions: 2673835
Number of successful extensions: 5939
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5933
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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