Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11r
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p pro...    30   3.0  
AY071347-1|AAL48969.1|  493|Drosophila melanogaster RE38504p pro...    30   3.0  
AE014296-3366|AAF51600.2|  493|Drosophila melanogaster CG5872-PA...    30   3.0  
AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA...    30   3.0  

>AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -3

Query: 633 DRRMLEAQRTAQPRTTQNPAELLEPEVERTRGHG 532
           D R L AQ   QPR    P E+L PE    RGHG
Sbjct: 15  DWRDLAAQTEEQPRV-YTPGEVLMPEAGFMRGHG 47


>AY071347-1|AAL48969.1|  493|Drosophila melanogaster RE38504p
           protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 698 CEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHNPERPKTPPNYWNP 558
           CE   NF G    D+ +     + +C     RH   R  TPP +WNP
Sbjct: 430 CEKFINFMGSNLTDEKIK--DYLAKC-----RHEDARSSTPPGFWNP 469


>AE014296-3366|AAF51600.2|  493|Drosophila melanogaster CG5872-PA
           protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 698 CEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHNPERPKTPPNYWNP 558
           CE   NF G    D+ +     + +C     RH   R  TPP +WNP
Sbjct: 430 CEKFINFMGSNLTDEKIK--DYLAKC-----RHEDARSSTPPGFWNP 469


>AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -3

Query: 633 DRRMLEAQRTAQPRTTQNPAELLEPEVERTRGHG 532
           D R L AQ   QPR    P E+L PE    RGHG
Sbjct: 15  DWRDLAAQTEEQPRV-YTPGEVLMPEAGFMRGHG 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,548,431
Number of Sequences: 53049
Number of extensions: 810224
Number of successful extensions: 2343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2343
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)