Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11r
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical pr...    29   4.7  
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF016447-2|AAG24012.1|  339|Caenorhabditis elegans Hypothetical ...    28   6.3  

>Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical
           protein T07D10.1 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 395 PTWC*VVTGAHRHLQRKCATHLEM*VLRPQYSYNGCPTLQTETHYCF 255
           PTWC  VTGA  H + +C          P   Y  CPT+ +E HY +
Sbjct: 113 PTWC-SVTGARFH-EFQCT---------PPAPYCPCPTILSEFHYTY 148


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
            ZK688.5a protein.
          Length = 1620

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 636  EDRRMLE--AQRTAQPRTTQNPAELLEPEVERTRGHGGTQSNEQCCVD 499
            E R++L   A  ++QP T+ +    +     R R H G++ +   CVD
Sbjct: 1529 ESRQLLPTIASTSSQPSTSSSSLNTVSTNNPRKRNHDGSREDNDDCVD 1576


>AF016447-2|AAG24012.1|  339|Caenorhabditis elegans Hypothetical
           protein C54F6.9 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 701 SCEGCKNFYGELYKDDPVMLAKKIEEC 621
           SCE CK F+     ++P    KK+  C
Sbjct: 23  SCEACKMFFRRAIVENPFFNCKKLNNC 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,360,743
Number of Sequences: 27780
Number of extensions: 399050
Number of successful extensions: 1015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)