Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11r
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    27   0.25 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    27   0.25 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.1  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   5.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 704 WSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHN 597
           +SCEGCK F+    + D     ++ + C   + + N
Sbjct: 125 YSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRN 160


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 704 WSCEGCKNFYGELYKDDPVMLAKKIEECSKHRGRHN 597
           +SCEGCK F+    + D     ++ + C   + + N
Sbjct: 125 YSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRN 160


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 701 SCEGCKNFY 675
           SCEGCK F+
Sbjct: 83  SCEGCKGFF 91


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 584 WVVRGCAVLCASSILRSSLPTSQDRPYTAHRRNFYIL 694
           W+ RG      ++ + S LP +   P  ++ R+F+ L
Sbjct: 516 WIERGTTKSMEAANIMSKLPKTVRTPTDSYIRSFFEL 552


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 701 SCEGCKNFYGELYKDDPVMLAKKIEEC 621
           +CEGCK F+      + V   K    C
Sbjct: 203 TCEGCKGFFRRSITKNAVYQCKYGNNC 229


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -1

Query: 698 CEGCKNFYGELYKDDPVMLAKKIEEC 621
           CEGCK F+      + V   K    C
Sbjct: 1   CEGCKGFFRRSITKNAVYQCKYGNNC 26


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 597 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 511
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 597 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 511
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 597 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 511
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,372
Number of Sequences: 438
Number of extensions: 5264
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)