Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11f
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   1.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 200 YSRAFIILRVLCQILKYSKVNRRITKLSLKFKNKSVKV 313
           +S  F+I+R +C  L   KVN   T+  L   + S  V
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADV 361


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 200 YSRAFIILRVLCQILKYSKVNRRITKLSLKFKNKSVKV 313
           +S  F+I+R +C  L   KVN   T+  L   + S  V
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADV 361


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 271 YKTQFEIQKQKCESESCP 324
           Y    E Q+Q+C    CP
Sbjct: 477 YAKDLEKQRQQCNQNKCP 494


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 287 KFKNKSVKVNPVLV 328
           K KNK  KV P+L+
Sbjct: 98  KLKNKERKVKPLLI 111


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 366 IVFCIYYFF 340
           I+ CIYYF+
Sbjct: 234 ILLCIYYFY 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.131    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,739
Number of Sequences: 336
Number of extensions: 1846
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)