Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m11f
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical pr...    33   0.10 
Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical p...    29   1.7  
Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical p...    29   1.7  
Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z48334-3|CAA88310.1|  471|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AL032654-11|CAB63389.2|  529|Caenorhabditis elegans Hypothetical...    27   6.9  

>Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical
           protein C17E4.2 protein.
          Length = 819

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
 Frame = +1

Query: 178 IQALDSVLQQSFHYLKGIVSDFEVLQSESENYKTQFEIQKQKCESESCPSAEALKK---- 345
           I+ L S ++Q   Y++ +  +FE +Q+E+E  KTQ E ++ + E ES    + + K    
Sbjct: 22  IEELRSEIEQLEQYIRNLQINFEKIQTENEILKTQLEEKETEAE-ESQRLLDVIHKDRDE 80

Query: 346 VIDTKNNIIGLVASTLTKLYETKNFDILTEAFKILYKSNTTNPALL--ETEKLSPIAESR 519
            I+ K  +     + + K+ E +N  +  E   +    N  N A +    +KL  +    
Sbjct: 81  CIEEKMKVSRFYRNEIKKVIE-ENEALRKENNNLKDTYNNENIAKIGKNLDKLQEVKTDI 139

Query: 520 ACNE-KLRE-DSLN 555
             N+ KL+E DS+N
Sbjct: 140 CKNKIKLKEVDSMN 153


>Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 205 QSFHYLKGIVSDFEVLQSESENYKTQFEIQKQKCE--SESCPSAEALKK 345
           ++F+     VSD E L+ E + +K + E  + KCE   + C   E  KK
Sbjct: 140 ENFNLNMPSVSDVEKLRRERDQFKKEMEKYRSKCEKLEKRCEQLEMEKK 188


>Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 205 QSFHYLKGIVSDFEVLQSESENYKTQFEIQKQKCE--SESCPSAEALKK 345
           ++F+     VSD E L+ E + +K + E  + KCE   + C   E  KK
Sbjct: 140 ENFNLNMPSVSDVEKLRRERDQFKKEMEKYRSKCEKLEKRCEQLEMEKK 188


>Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical
           protein C11H1.2 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 464 VLDLYSILNASVSMSKFFVSYSFVNVDATNPMILFFVSI--TFFNASAL 324
           V+ + S+    ++M+KFFVS S  NV ++N ++L F  I   +F +S L
Sbjct: 356 VIAITSVRGLLITMAKFFVSIS--NVRSSNIIVLGFAQIMGMYFVSSVL 402


>Z48334-3|CAA88310.1|  471|Caenorhabditis elegans Hypothetical
           protein F10B5.3 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 253 QSESENYKTQFEIQKQKCESESCPSAEALKKVI 351
           QS++EN +TQ E    +  S S P    L+K++
Sbjct: 201 QSDTENSRTQSEGSSPRANSTSTPPTTDLEKIV 233


>AL032654-11|CAB63389.2|  529|Caenorhabditis elegans Hypothetical
           protein Y52B11A.7 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 190 DSVLQQSFHYLKGIVSDFEVLQSESENYKTQFEIQKQKCESESCPSAEALKKV 348
           DSVL  S H+++  VS      S+ E +    E+  +  E+    + E  +K+
Sbjct: 41  DSVLDLSNHWIEQAVSALMATSSDYEAFDDPIEVTNEIVEAPKLSAEELFQKI 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.131    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,896,579
Number of Sequences: 27780
Number of extensions: 165411
Number of successful extensions: 617
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)