Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10m10f
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 25 0.54
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 3.8
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 5.0
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 6.6
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 21 6.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 6.6
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.7
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 25.0 bits (52), Expect = 0.54
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 254 RDDLSRMPGRIEVVGVFRRFF--LGALLT 174
+D+L + P RI G+FRRF+ LG L T
Sbjct: 538 KDELGK-PSRISKQGLFRRFYNLLGKLST 565
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 375 RPPF-VWQLNSPSASHSC 325
RP + W+LN+ ++ H+C
Sbjct: 8 RPSYCTWELNATNSPHTC 25
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 5.0
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 409 IHPNTPRVSAIASSFR 362
IHP PR+ ++ ++++
Sbjct: 160 IHPGDPRIKSVVTAYK 175
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 105 EAFFDEYDYYNFD 143
E + D+YDY N D
Sbjct: 21 ELYSDKYDYVNID 33
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 228 SGHSRKIVTKLMNAEHNKKTSNTKH*MDC 314
+G S+KI+ ++ N N + N + ++C
Sbjct: 37 TGTSQKIIDEVYNGNVNVEDENVQSYVEC 65
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 575 EIRHWNGVTSKIYRLTAWLICGVVPF 498
E+RH V +K Y L G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 105 EAFFDEYDYYNFD 143
E + D+YDY N D
Sbjct: 21 ELYSDKYDYVNID 33
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 575 EIRHWNGVTSKIYRLTAWLICGVVPF 498
E+RH V +K Y L G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 344 GLLSCQTKGGRYCGY 388
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 344 GLLSCQTKGGRYCGY 388
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 344 GLLSCQTKGGRYCGY 388
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 299 TLDGLLINRQLWLAEGLLSCQTKGGRYCG 385
++D I+ + +LAE S +YCG
Sbjct: 60 SIDRSSIHEESYLAESSRSIDPCASKYCG 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,656
Number of Sequences: 438
Number of extensions: 3526
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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