Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10m06f
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.3  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 193 PPQDCHH*FQFHVYNKAAIP 134
           PP   HH  ++H Y    +P
Sbjct: 166 PPVYTHHYARYHPYPNFGVP 185


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 407 QQRSSY*YCWCQLQSW 454
           +Q  S   CW  LQ+W
Sbjct: 186 KQVQSMPQCWIDLQTW 201


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 148 KAAIPGYWL 122
           KA  PGYWL
Sbjct: 593 KATNPGYWL 601


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 411 CCYKLCWNYCVRCRGHCQQY 352
           C  KL W +C R   +C  +
Sbjct: 55  CELKLWWEFCQRNGHNCLDF 74


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 211 DLSLVPLTVHTVT 249
           DLS VP+  H++T
Sbjct: 501 DLSAVPIVTHSLT 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,132
Number of Sequences: 336
Number of extensions: 3393
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)