BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10m06f (546 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_05_0671 - 24164490-24164544,24164920-24165086,24165787-241659... 30 1.0 01_05_0302 + 20637139-20637291,20637390-20637476,20637609-206378... 29 1.8 06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024,957... 29 2.4 01_05_0612 - 23652121-23652400,23653031-23654427 29 3.2 06_03_0739 + 24004629-24005219 28 4.2 05_04_0069 - 17639386-17641380 28 4.2 10_08_0032 - 14288522-14290465 28 5.6 03_02_0892 - 12218803-12218864,12219395-12219740 27 7.4 03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 27 7.4 01_06_1564 - 38276207-38276434,38276571-38276707,38277214-382776... 27 7.4 07_01_0384 + 2861819-2862169 27 9.8 05_05_0172 + 22944351-22944388,22947342-22947446,22947532-229475... 27 9.8 >01_05_0671 - 24164490-24164544,24164920-24165086,24165787-24165941, 24166291-24166458,24167471-24167552 Length = 208 Score = 30.3 bits (65), Expect = 1.0 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Frame = +2 Query: 23 YAVYHYFVGPW-AC---CCGGCSYQPTKDYWWLHD---QH*PVSRYSC 145 + +YH+ GPW C C GG Y+ Y L D +H PV SC Sbjct: 83 HEIYHWVAGPWMKCSSPCDGGVRYRDVACYGNLSDATIKHYPVDDASC 130 >01_05_0302 + 20637139-20637291,20637390-20637476,20637609-20637836, 20638014-20638184,20638843-20638896,20639028-20639174, 20639326-20639706 Length = 406 Score = 29.5 bits (63), Expect = 1.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGN 197 TNPQ +IGGS + ++ Y + Y +++ W GGN Sbjct: 251 TNPQFVIGGSLSPVSIY---GSTQYEYDYLVWKDPAGGN 286 >06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024, 9576692-9576862,9577004-9577231,9577392-9577478, 9577600-9577761 Length = 409 Score = 29.1 bits (62), Expect = 2.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +3 Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGN 197 TNPQ +IGGS + ++ Y Y +++ W GGN Sbjct: 254 TNPQFVIGGSISPVSTY---GDTQYEYDYLVWKDPAGGN 289 >01_05_0612 - 23652121-23652400,23653031-23654427 Length = 558 Score = 28.7 bits (61), Expect = 3.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +3 Query: 276 GSTFANSGGVVHNVNRII--IHPNYNRRTADSD 368 G T A S ++R++ +HPN NR+T DSD Sbjct: 64 GITVAFSAAAPPAISRLLFALHPNKNRQTTDSD 96 >06_03_0739 + 24004629-24005219 Length = 196 Score = 28.3 bits (60), Expect = 4.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 225 AAHCPYGDATGRWRIRVGSTFANSGGVVHNVNRIIIH 335 AAH PY + R+ + G +GG + RII H Sbjct: 160 AAHTPYSECPSRFAVADGEGRVYAGGYAWSPRRIIRH 196 >05_04_0069 - 17639386-17641380 Length = 664 Score = 28.3 bits (60), Expect = 4.2 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +3 Query: 213 SILSAAHCPYGDATGRWRIRVGSTFANSGGVVHNV---NRIIIHPNYNRRTADSDLCILR 383 S L AAH +GDA G W + S GV NV N ++ N + R D+ L ++R Sbjct: 90 SALIAAHASHGDAEGAWGL---LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVR 146 >10_08_0032 - 14288522-14290465 Length = 647 Score = 27.9 bits (59), Expect = 5.6 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 270 RVGSTFANSGGVVH-NVNRIIIHPNYNRRTADSDLCILRSNSNIAY 404 R+G A++ ++ +VN+++IHP R+ + + + +AY Sbjct: 465 RIGELVASNFSIIGVDVNQVVIHPRLGRKGYEMIIAFMNPEGMLAY 510 >03_02_0892 - 12218803-12218864,12219395-12219740 Length = 135 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +3 Query: 192 GNILNQRSILSAAHCPYGDATGRWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADSDL 371 GN+ + R ++AA +A R R R + G+VH+ ++ P Y + D L Sbjct: 59 GNLADMREAVAAARHQLAEARRRRRARDSGDGGSGAGIVHDYRPAVL-PFYEKWRKDYGL 117 >03_02_0741 - 10857656-10857844,10858315-10858848,10859516-10859824, 10860521-10860622,10861446-10861613,10862734-10862847, 10863003-10863107,10863206-10863336,10863680-10863804, 10863890-10864061,10864411-10864505,10864771-10864841, 10864923-10865009,10865119-10865184,10865401-10865499, 10866631-10866672,10866757-10866822,10866910-10867101, 10867224-10867289,10868473-10868811 Length = 1023 Score = 27.5 bits (58), Expect = 7.4 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = -3 Query: 190 PQDCHH*FQFHVYNKAAIPGYWLMLVVEPPIILCGLV 80 P+DCH + ++ PG+++ + V+ P +L LV Sbjct: 108 PEDCHTVIALPLPHQPLFPGFFMAMSVKDPKLLKALV 144 >01_06_1564 - 38276207-38276434,38276571-38276707,38277214-38277621, 38277895-38278256,38278427-38278524,38278727-38278863, 38279346-38279444,38279753-38280053 Length = 589 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = -2 Query: 377 DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKD 198 D ++ +S + S H MH T +V + TP+ ++++ T+ GT S K Sbjct: 276 DTHSVLTKSSPVSYFASLSYHEMHETSSVVGSSMSYLTPSMSAMSLTTIDGTDSLSNGKG 335 Query: 197 V 195 V Sbjct: 336 V 336 >07_01_0384 + 2861819-2862169 Length = 116 Score = 27.1 bits (57), Expect = 9.8 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 3/26 (11%) Frame = +3 Query: 135 GIAALLYTWNWNQWWQ---SCGGNIL 203 G+ + W W +WWQ CG N++ Sbjct: 31 GLEVEVAKWWWQRWWQRRWRCGSNVV 56 >05_05_0172 + 22944351-22944388,22947342-22947446,22947532-22947585, 22948705-22949052,22949163-22949228,22950047-22950440 Length = 334 Score = 27.1 bits (57), Expect = 9.8 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 351 RTADSDLCILRSNSNIAYNNNV 416 RTA SDL +L SN A NN+V Sbjct: 165 RTASSDLKVLISNRTAAVNNDV 186 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,037,480 Number of Sequences: 37544 Number of extensions: 368561 Number of successful extensions: 1056 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1056 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1222086348 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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