Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l23r
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0) 294 5e-80
SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30) 143 1e-34
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 34 0.12
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.37
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 31 0.64
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35415| Best HMM Match : BRF1 (HMM E-Value=4.4) 30 1.5
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 30 1.5
SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1) 30 2.0
SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05) 29 2.6
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 2.6
SB_33613| Best HMM Match : PAS (HMM E-Value=0.0083) 29 2.6
SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_26485| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) 29 3.4
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 29 3.4
SB_45437| Best HMM Match : Ribosomal_L15e (HMM E-Value=0.53) 29 4.5
SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 6.0
SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 6.0
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 28 7.9
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0)
Length = 328
Score = 294 bits (721), Expect = 5e-80
Identities = 140/221 (63%), Positives = 171/221 (77%)
Frame = -3
Query: 670 GDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEY 491
GD ++ +AY+HELP +GVKVGLTNYAAAY TG DEY
Sbjct: 103 GDRVLASAYAHELPNFGVKVGLTNYAAAYCTGLLLARRLLTMLNLHEIYTGTDDVNGDEY 162
Query: 490 NVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKF 311
NVE VD PGAFRC+LDVGLART+TGARVFGA+KGAVDGGL +PHS+KRFPGYD+ESK F
Sbjct: 163 NVESVDGSPGAFRCFLDVGLARTSTGARVFGALKGAVDGGLEIPHSMKRFPGYDSESKDF 222
Query: 310 NAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAD 131
+AEVHR HIFG HVAEYMRSL ++DE+S+KRQFS YIK GV AD+IE IYK AH+AIRAD
Sbjct: 223 SAEVHRNHIFGKHVAEYMRSLAEEDEESYKRQFSAYIKNGVDADSIEGIYKAAHQAIRAD 282
Query: 130 PSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 8
P HKK E KKD V+ KR++++K++ +R +R+KQKKA+F++
Sbjct: 283 PVHKKAE-KKD-VQLKRFHRKKMSRQQRVDRVKQKKAAFLR 321
>SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30)
Length = 113
Score = 143 bits (346), Expect = 1e-34
Identities = 67/105 (63%), Positives = 74/105 (70%)
Frame = -3
Query: 670 GDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEY 491
GD I+CAAY+HELPRYGVKVGLTNYAAAY TG DEY
Sbjct: 8 GDVIICAAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTKLNLHEIYTGTEEVNGDEY 67
Query: 490 NVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 356
NVE +D PGAFRC+LDVGLART+TGARVFGA+KGAVDGGL +PH
Sbjct: 68 NVESIDGSPGAFRCFLDVGLARTSTGARVFGALKGAVDGGLEIPH 112
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 35.5 bits (78), Expect = 0.039
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -3
Query: 259 MRSLEQDDEDSFKRQFSKYI----KLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 92
++ EQ ++ FK++ + Y+ K G T D IE KK H D HK+ K
Sbjct: 345 VKFFEQKQKEEFKKEETDYLDVFKKGGTTKDKIEKKDKKKHHKKHKDKEHKEHHHK---- 400
Query: 91 KQKRWNKRKLTLAERKNRIKQK 26
K++ +K T E K R K +
Sbjct: 401 KKRSHSKTSSTTDEEKERKKSE 422
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = -3
Query: 247 EQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK--KDSVKQKRWN 74
+QD+ F QF K +KLG+ D++ K + +R S EL KD V + + N
Sbjct: 361 DQDNYKKFYEQFGKNLKLGIHEDSVNR--AKLADLLRYHSSSSGDELTSLKDYVTRMKEN 418
Query: 73 KRKLTLAERKNRIKQKKASFIKRL 2
++ + +++ + ++F++R+
Sbjct: 419 QKDIYFITGESKDQVSHSAFVERV 442
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 178 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
A EA+Y +A P+ KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 135 AAEALY----QAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 182
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -3
Query: 184 ADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
A+A+ + + + KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 136 AEALYQAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 189
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 121 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 158 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 190
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -3
Query: 256 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 77
++L Q +E +R +K K + +EA KK E + +KKE K+ K++R
Sbjct: 320 KALRQKEEKEKQRLEAKAAK---EKERLEAKQKKEQERLEKQAEKEKKE-KERLEKKQRE 375
Query: 76 NKRKLTLAERKNRIKQKK 23
K +L E+K K+KK
Sbjct: 376 EKDRLEKKEKKEEEKRKK 393
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = -3
Query: 259 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEA--IYK--KAHEAIRADPSHKKKELKKDSV 92
M+ + +DS KR+ + GV I+ + K +AH+ A P +KKK KK+
Sbjct: 255 MKKGSKQAKDSAKRKTTVVTSAGVIKKPIKLAKVMKMIRAHKLTPAKPVNKKKNDKKEQT 314
Query: 91 KQKRWNKRKLTLAERKNRIKQKKASFIK 8
+QK K K+ + K++ K K +K
Sbjct: 315 QQKE-KKNKIN-NDVKSKSKSKIVKILK 340
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 169 AIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
A +K + R H+ K K++SVK KR KRK +RK++ K K
Sbjct: 204 AKHKHKRKRKRESAKHRLKR-KRESVKHKRKQKRKSAKHKRKHKRKSDK 251
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 139 RADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 5
R + KKK+ KK K+K+ K+K +KN+ K KK +K+
Sbjct: 14 REEKKRKKKKQKKKKKKKKK-KKKKKNKKNKKNKNKNKKKKKMKK 57
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -3
Query: 163 YKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
Y++ + + KKK+ KK K+ + NK+ ++K ++K+KK
Sbjct: 13 YREEKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKK 59
>SB_35415| Best HMM Match : BRF1 (HMM E-Value=4.4)
Length = 408
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 187 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTL 56
T D + + K+ EA + K+ ++D ++K+WNKR+ L
Sbjct: 38 TEDRMNHLMKQKTEAAKKQRISNKQARQEDQEERKKWNKRQAVL 81
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -3
Query: 229 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 50
S ++S + G D E +K + +KKE KK+ K+K+ ++K E
Sbjct: 16 SIDGRWSSKTRKGGKRDEREQEREKKERRKKERKKERKKERKKERKKEKKKERKKERKEE 75
Query: 49 RKNRIKQKKASF 14
RK K+ + F
Sbjct: 76 RKKERKKAEKKF 87
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 121 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 5
+KKE KK+ K+++ K+K ERK K+++ K+
Sbjct: 48 RKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKK 86
>SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1)
Length = 298
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 331 DAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIK 197
D+ K+ NAE+ RA +++ ++S D+E + R+F + K
Sbjct: 157 DSSVKRGNAEIRRARFRATTISQVVQSFRSDEERNSVRKFIAHYK 201
>SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05)
Length = 791
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 366 LRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLST 479
+RP PF+ P +RAP A PT+ P P S+
Sbjct: 356 MRPAHIGPFLYPDSRAPFSPLASPTASSDSGHPSPGSS 393
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = -3
Query: 271 VAEYMRSLEQDDEDSFKRQFSKYIKL------GVTADAIEAIYKKAHEAIRADPSHKKKE 110
VA++ ++ + K++F K +KL +++D I+ + A+ H+ +E
Sbjct: 545 VAQFSCCEVEEAWEELKQKFFKAVKLFGEDPKNLSSDQFFGIFNVFLVSF-AEAKHQNEE 603
Query: 109 LKKDSVKQKRWNKRKLTLAERKNRIKQKKA 20
+KK ++R KR+ LAE+K R +QK A
Sbjct: 604 IKKKKEAEER--KRR-ALAEQKERDRQKSA 630
>SB_33613| Best HMM Match : PAS (HMM E-Value=0.0083)
Length = 624
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 366 LRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLST 479
+RP PF+ P +RAP A PT+ P P S+
Sbjct: 222 MRPAHIGPFLYPDSRAPFSPLASPTASSDSGHPSPGSS 259
>SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 133 DPSHKKKELKKDSVKQKRWNKRK-LTLAERKNRIKQKKA 20
+ S KKELK D+ K+ NKRK + +E K KKA
Sbjct: 129 ETSESKKELKSDTKSVKKANKRKTMNESESTKTKKPKKA 167
>SB_26485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 187 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTL 56
T D + + K+ EA + K+ ++D ++K+WNKR+ L
Sbjct: 712 TEDRMNHLMKQKTEAAKKQRICNKQARQEDQEERKKWNKRQAVL 755
>SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)
Length = 315
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 187 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 50
T DAI+A K+ +E D + K +K K + W + ++ LA+
Sbjct: 232 TCDAIKAYLKQVYEEEFYDDIEQSKPIKDPKSKDQLWTEVEMILAQ 277
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -3
Query: 247 EQDDEDSFKRQFSKYIKLGV--TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 74
E+DD+D F+ Q +K G T + K A E A P+ K+KE KK K+K +
Sbjct: 348 EKDDDDDFELQLAKPEPEGKKGTKRGKKKTSKDATEESEA-PNKKRKEKKKKKKKKKASS 406
Query: 73 K 71
K
Sbjct: 407 K 407
>SB_45437| Best HMM Match : Ribosomal_L15e (HMM E-Value=0.53)
Length = 273
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -3
Query: 211 SKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIK 32
S++I L D + + KKAH + P E ++ K+ KR LAE RI+
Sbjct: 16 SQHITLSNPPDVKKTLQKKAHHSKVVHPKKHHSEENDETDKEHVRRKRHPDLAEMLRRIQ 75
Query: 31 Q 29
+
Sbjct: 76 R 76
>SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 121 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
KKK+ KK K+K+ NK+K+ E K ++++
Sbjct: 115 KKKKKKKKKKKKKKINKKKINKVEEKEEGEEEE 147
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 124 HKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 23
HK K+ K++ K++R + K +ERK ++KK
Sbjct: 191 HKDKKKKREESKERRRHSDKAEKSERKREKEEKK 224
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 106 KKDSVKQKRWNKRKLTLAERKNRIKQK 26
+KD + RW+KR +L + K R+K+K
Sbjct: 709 EKDLSLRSRWSKRVHSLIDEKTRVKEK 735
>SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -3
Query: 340 PGYDAES-KKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLG-VTADAIEA 167
P D++S KK + ++ I + +S ++ D+ S KR K++K + + A
Sbjct: 168 PCCDSKSTKKPSKSSKKSEIAKSEKHKSAKSHDKKDK-SPKRHEEKHVKKSSIPTKKVVA 226
Query: 166 IYKKAHEAIRADPSHKK--KELKKDSVKQKRWNKRKLTLAERKNRIKQKKA 20
+ KKA + D +HK + K K +K K+ + + K K A
Sbjct: 227 VVKKAKSNTKKDSAHKPVISKSPKPKAMSKTKSKHKIAKKGKSGKAKDKAA 277
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 321 DSAS*PGNLLME*GTLRPPSTAPFIAPKTRAPV 419
D+ P +M T+RPP T F+ T+APV
Sbjct: 1653 DTTVAPETTVMPDTTMRPPKTDVFVTEATKAPV 1685
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 166 IYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQ 29
+ ++ EA + KK+E K +KQK ++KL ER+ +Q
Sbjct: 1166 LQREREEAEHQEAERKKEEEAKQKLKQKEDARKKLEEVERRKSQQQ 1211
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 265 EYMRSLEQDDEDSFKRQFSKYIKLG-VTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK 89
EY R Q +E F R+ + + G V A ++ Y + + + K KEL+K+ K
Sbjct: 282 EYAREKAQLEESYF-REKEDFQRSGLVQASEVKESYNREKQELEESYKQKIKELQKNFAK 340
Query: 88 QKR 80
+K+
Sbjct: 341 EKQ 343
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Frame = -3
Query: 181 DAIEAIYKKAHEAI--RADPSHKKKELKKDSVKQKRWNK---RKLT-LAERKNRIKQKK 23
+ IEA+ K+A I R + K +E +K +QKR ++ R+L +AE KNR +Q K
Sbjct: 1209 ERIEALNKEADLLIQRRKEAERKAEEKRKQIERQKRIDEEVERRLQKIAEEKNREEQLK 1267
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Frame = +3
Query: 27 FCLILFFLSAN--------VSLRLFQRFCLTESFFNS 113
FCL +FF+S + S+RLF+ FC+T S F S
Sbjct: 242 FCLSIFFISKDKKEEVLHFFSIRLFKVFCVTLSGFTS 278
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,742,755
Number of Sequences: 59808
Number of extensions: 402159
Number of successful extensions: 1606
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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