Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l19f
(622 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g14410.1 68416.m01823 transporter-related low similarity to S... 33 0.15
At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate transloca... 31 0.81
At5g55950.1 68418.m06978 transporter-related low similarity to U... 30 1.1
At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate transloca... 30 1.1
At4g32390.1 68417.m04612 phosphate translocator-related low simi... 30 1.4
At3g21250.1 68416.m02685 ABC transporter family protein similar ... 30 1.4
At1g52880.1 68414.m05979 no apical meristem (NAM) family protein... 30 1.4
At3g29033.1 68416.m03629 glycine-rich protein 29 3.3
At3g56480.1 68416.m06281 myosin heavy chain-related contains wea... 28 4.3
At1g64530.1 68414.m07315 RWP-RK domain-containing protein simila... 28 5.7
At5g25400.1 68418.m03013 phosphate translocator-related low siim... 27 7.6
At2g25520.1 68415.m03055 phosphate translocator-related low simi... 27 7.6
>At3g14410.1 68416.m01823 transporter-related low similarity to
SP|Q96A29 GDP-fucose transporter 1 {Homo sapiens},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275; contains 10
predicted transmembrane domains;
Length = 340
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +1
Query: 319 FYQRWLLR----DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVA 486
F+ +W+L +F YPL + + H++ +L L+ VL + + L + + SV
Sbjct: 31 FFNKWVLSSKEINFPYPLGLTLLHMIFSSVLCFLLTKVLKIVKVEEGMTLEI--YVTSVI 88
Query: 487 PTGLSSGIDVGFSNWGLELVTISLYTMTKS 576
P G + + N ++++ M K+
Sbjct: 89 PIGAMFAMTLWLGNTAYLYISVAFAQMLKA 118
>At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate
translocator-related similar to glucose 6
phosphate/phosphate translocators from Pisum sativum]
GI:2997591, [Mesembryanthemum crystallinum] GI:9295277,
[Solanum tuberosum] GI:2997593; contains Pfam profile
PF00892: Integral membrane protein
Length = 341
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 328 RWLLR--DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLS 501
+W+ + DFK+PL+V H + + + +V VL P +V+ R + P
Sbjct: 34 KWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVL---KLKPLIVVDPEDRWRRIFPMSFV 90
Query: 502 SGIDVGFSNWGLELVTISLYTMTKSTT 582
I++ N L + +S KS T
Sbjct: 91 FCINIVLGNISLRYIPVSFMQTIKSLT 117
>At5g55950.1 68418.m06978 transporter-related low similarity to
UDP-sugar transporter [Drosophila melanogaster]
GI:14971008, UDP-glucuronic acid transporter [Homo
sapiens] GI:11463949
Length = 398
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/76 (22%), Positives = 31/76 (40%)
Frame = +1
Query: 346 FKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGFS 525
F +P+ + + H V W+L +S+ P P + A +SG+ +
Sbjct: 84 FNFPIFLTLIHYTVAWILLAFFKSLSLLPMSPPSKTTPFSSLFSLGAVMAFASGL----A 139
Query: 526 NWGLELVTISLYTMTK 573
N L+ ++ Y M K
Sbjct: 140 NTSLKHNSVGFYQMAK 155
>At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate
translocator-related similar to
glucose-6-phosphate/phosphate-translocators from
[Mesembryanthemum crystallinum] GI:9295277, [Solanum
tuberosum] GI:2997593, [Pisum sativum] GI:2997591;
contains Pfam profile PF00892: Integral membrane protein
Length = 336
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 328 RWLLR--DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLS 501
+W+ + DFK+PL+V H + + + +V VL P +V+ R + P
Sbjct: 28 KWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVL---KLKPLIVVDPEDRWRRIFPMSFV 84
Query: 502 SGIDVGFSNWGLELVTISLYTMTKSTT 582
I++ N L + +S KS T
Sbjct: 85 FCINIVLGNVSLRYIPVSFMQTIKSFT 111
>At4g32390.1 68417.m04612 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
SP|P52178 Triose phosphate/phosphate translocator,
non-green plastid, chloroplast precursor (CTPT)
{Brassica oleracea}
Length = 350
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +1
Query: 343 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 522
++ +P+T+ M H+ L+V++ V + + T IRSV P G + +
Sbjct: 46 NWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVS---MSRDTYIRSVVPIGALYSLSLWL 102
Query: 523 SNWGLELVTISLYTMTKS 576
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
>At3g21250.1 68416.m02685 ABC transporter family protein similar to
MRP-like ABC transporter GB:AAC49791 from [Arabidopsis
thaliana]
Length = 1294
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 473 MLVPRGNTS*GVFVMQYSTERTSTDSNHFTTKWYITTVNGYL 348
+L+P+G + G+ + S T T + F T+WY T N +
Sbjct: 970 ILIPKGYIAPGLVGLSLSYALTLTQTQVFLTRWYCTLSNSII 1011
>At1g52880.1 68414.m05979 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM (no apical meristem) GB:CAA63101 from
[Petunia x hybrida]; identical to cDNA NAC domain
protein GI:4325285
Length = 320
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 540 ARHHIAVHNDEIDNDHF-HSRLRDNSRF 620
+RHH +H+ +DNDH H + D+ RF
Sbjct: 183 SRHHHHLHHIHLDNDHHRHDMMIDDDRF 210
>At3g29033.1 68416.m03629 glycine-rich protein
Length = 167
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 535 GPNSRSPRRCRWTGRSEPRTGC*SREATPAEGSS 434
G N SP R TG++ P GC + TP +GS+
Sbjct: 59 GRNYDSPNHGRGTGQNSPNPGC-YDQVTPYQGSA 91
>At3g56480.1 68416.m06281 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, cardiac muscle alpha
isoform (MyHC-alpha) (Alpha isomyosin) (Fragment)
(Swiss-Prot:P04460) [Oryctolagus cuniculus]
Length = 490
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 606 REAENENDRCRFRHCVQRYGDELQAPIREAHVDAAGQAGRSHGPDASPERQHQLRGLRDA 427
R E ++ R + G +++ + E V A Q R H P QH+L GLR+
Sbjct: 197 RLGEAFEEQERISEASRAQGPDVEKLVEE--VQEARQIKRMHHPTKVMGMQHELHGLRNR 254
Query: 426 VQ 421
+Q
Sbjct: 255 IQ 256
>At1g64530.1 68414.m07315 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 841
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 384 CEVVAVCASAFRAVLHHEDPSAGVASRD 467
C+V +C + FR H+++PS VA D
Sbjct: 684 CKVNPICETRFRLPTHNQEPSRQVALDD 711
>At5g25400.1 68418.m03013 phosphate translocator-related low
siimilarity to phosphoenolpyruvate/phosphate
translocator precursor [Mesembryanthemum crystallinum]
GI:9295275, SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea}
Length = 349
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 343 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 522
D+ +P+++ M H+ L+ L+ V + + T +RSV P G + +
Sbjct: 46 DWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVS---MSRDTYLRSVVPIGALYSLSLWL 102
Query: 523 SNWGLELVTISLYTMTKS 576
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
>At2g25520.1 68415.m03055 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 347
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 343 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 522
++ +P+T+ M H+ L+V++ V + + T +RSV P G + +
Sbjct: 46 NWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVS---MSRETYLRSVVPIGALYSLSLWL 102
Query: 523 SNWGLELVTISLYTMTKS 576
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,679,033
Number of Sequences: 28952
Number of extensions: 281652
Number of successful extensions: 815
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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