BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10l17r (749 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.8 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.8 EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 9.3 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 23.8 bits (49), Expect = 1.8 Identities = 8/25 (32%), Positives = 14/25 (56%) Frame = -2 Query: 571 YNALNNGPFKDIKTIIVINISTNIM 497 YN NN +KD + +N T+++ Sbjct: 304 YNKFNNNVYKDALIVCTVNSCTSML 328 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 23.8 bits (49), Expect = 1.8 Identities = 8/25 (32%), Positives = 14/25 (56%) Frame = -2 Query: 571 YNALNNGPFKDIKTIIVINISTNIM 497 YN NN +KD + +N T+++ Sbjct: 357 YNKFNNNVYKDALIVCTVNSCTSML 381 >EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein protein. Length = 1010 Score = 21.4 bits (43), Expect = 9.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +3 Query: 669 RGINLPYAYGELQFLGDTW 725 +G+N+PY Q G TW Sbjct: 890 QGMNVPYGMQRGQSGGQTW 908 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 159,042 Number of Sequences: 438 Number of extensions: 3222 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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