Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l16f
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4756 Cluster: PREDICTED: similar to Rab GTPase... 97 2e-19
UniRef50_Q1HQT3 Cluster: Rab GTPase-interacting factor golgi mem... 86 8e-16
UniRef50_UPI0000D55581 Cluster: PREDICTED: similar to CG12404-PA... 83 5e-15
UniRef50_Q4P3S8 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q9VK46 Cluster: CG12404-PA; n=3; Eumetazoa|Rep: CG12404... 52 1e-05
UniRef50_Q7S6S5 Cluster: Putative uncharacterized protein NCU055... 49 8e-05
UniRef50_Q54QY3 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_O94348 Cluster: Protein transport protein yip1; n=1; Sc... 46 8e-04
UniRef50_Q5DHQ9 Cluster: SJCHGC05720 protein; n=1; Schistosoma j... 44 0.003
UniRef50_Q5KED8 Cluster: Vesicle-mediated transport-related prot... 44 0.004
UniRef50_A6NKD5 Cluster: Uncharacterized protein YIPF7; n=34; Eu... 43 0.007
UniRef50_A3LNS5 Cluster: Predicted protein; n=4; Saccharomycetal... 42 0.012
UniRef50_Q969M3 Cluster: Protein YIPF5; n=18; Euteleostomi|Rep: ... 42 0.016
UniRef50_Q4Q8X2 Cluster: Putative uncharacterized protein; n=3; ... 41 0.022
UniRef50_Q4DQ58 Cluster: Putative uncharacterized protein; n=2; ... 41 0.022
UniRef50_P53039 Cluster: Protein transport protein YIP1; n=8; Sa... 39 0.12
UniRef50_Q8SW52 Cluster: Similarity to HYPOTHETICAL INTEGRAL MEM... 38 0.15
UniRef50_A1D9G0 Cluster: Golgi membrane protein, putative; n=7; ... 38 0.20
UniRef50_A4RUK7 Cluster: Predicted protein; n=2; Ostreococcus|Re... 37 0.35
UniRef50_Q5CQG6 Cluster: Yip1p like integral membrane protein; n... 36 1.1
UniRef50_A0EHJ1 Cluster: Chromosome undetermined scaffold_97, wh... 36 1.1
UniRef50_Q9BHB2 Cluster: Voltage-gated chloride channel CLH-6; n... 33 4.4
UniRef50_O18118 Cluster: Putative uncharacterized protein pqn-71... 28 8.6
>UniRef50_UPI00015B4756 Cluster: PREDICTED: similar to Rab
GTPase-interacting factor golgi membrane protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to Rab
GTPase-interacting factor golgi membrane protein -
Nasonia vitripennis
Length = 260
Score = 97.5 bits (232), Expect = 2e-19
Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +2
Query: 200 FGTTAQTLDFQTFPTDQQNYSFDQTQGTIPANNNQY-YNPNFFTPAPIPGEATSXXXXXX 376
FG Q DF+ + TDQQ+ + N NQ Y +TP + +
Sbjct: 26 FGQPNQQFDFRNY-TDQQSGEYAPYSQQEYLNPNQTAYTGELYTPDNYNQGSNTFTDEED 84
Query: 377 XXXXXXXXXXXXXRILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXX 556
RIL+KTLAVLNPFH + + DDAN+LL+D+D+AGP+
Sbjct: 85 EPPLLEELGIDPDRILQKTLAVLNPFHRRGQTDDANYLLQDSDLAGPLAFCLLLAAFLLL 144
Query: 557 SGNKAHFGFVYGLSMMSVILMYFLLS 634
+G+KAHFG+VYGL+ S ILMY L S
Sbjct: 145 AGSKAHFGYVYGLAFTSCILMYILQS 170
>UniRef50_Q1HQT3 Cluster: Rab GTPase-interacting factor golgi
membrane protein; n=3; Culicidae|Rep: Rab
GTPase-interacting factor golgi membrane protein - Aedes
aegypti (Yellowfever mosquito)
Length = 271
Score = 85.8 bits (203), Expect = 8e-16
Identities = 45/146 (30%), Positives = 70/146 (47%)
Frame = +2
Query: 197 TFGTTAQTLDFQTFPTDQQNYSFDQTQGTIPANNNQYYNPNFFTPAPIPGEATSXXXXXX 376
+F A +P+ QQ ++ Q P + + F P IPG A
Sbjct: 34 SFDQNASFFPPNAYPSPQQQQAYGQPSIFTPEIPSAGMSQAFGVPGDIPGAAGVEPSEFD 93
Query: 377 XXXXXXXXXXXXXRILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXX 556
RI++K++AVLNPFH Q D+ + ++TD+AGPI
Sbjct: 94 EPPLLDELEIYPQRIMDKSMAVLNPFHKQGLVDNPEYFFKETDLAGPIAFCLTLAACLFV 153
Query: 557 SGNKAHFGFVYGLSMMSVILMYFLLS 634
SG+KA FG++YGL ++SV++MY L++
Sbjct: 154 SGSKAQFGYIYGLCIISVVVMYVLIT 179
>UniRef50_UPI0000D55581 Cluster: PREDICTED: similar to CG12404-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12404-PA - Tribolium castaneum
Length = 251
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 416 RILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGL 595
RI++K LAVLNPF DDA++L +D D+AGPI SGNKAHFG++YG+
Sbjct: 89 RIVQKMLAVLNPFRSHGLTDDADYLNKDPDLAGPIFFYLILAVCLFLSGNKAHFGYIYGI 148
Query: 596 SMMSVILMYFLLS 634
S++S ++MY LLS
Sbjct: 149 SVLSCLMMYSLLS 161
>UniRef50_Q4P3S8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 292
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSK--ADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYG 592
I++KTL VLNP H S A DA+ ++ D D+AGP+ +G K+ FG+VYG
Sbjct: 122 IVDKTLTVLNPLHSYSASHAKDAH-MMDDADLAGPLLFCFLFGMTLLLAG-KSQFGYVYG 179
Query: 593 LSMMSVILMYFLLS 634
+++ I +Y LL+
Sbjct: 180 VALFGAISIYTLLN 193
>UniRef50_Q9VK46 Cluster: CG12404-PA; n=3; Eumetazoa|Rep: CG12404-PA
- Drosophila melanogaster (Fruit fly)
Length = 264
Score = 52.0 bits (119), Expect = 1e-05
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Frame = +2
Query: 116 MANYNNPNEYAWQTXXXXXXXXXXXXNTFGTTAQTLDFQTFPTDQQNY--SFDQTQGTIP 289
M+ + PN++ + + FG Q L+FQTF Q + ++D + P
Sbjct: 1 MSQFGGPNDF-YGSAPSADASYNFDMPEFG---QELNFQTFDNTQASVPPNYDASYAQPP 56
Query: 290 ANN-NQYYNPNFFTPAPIPGEATSXXXXXXXXXXXXXXX--------XXXXRILEKTLAV 442
+ +Y+P +T + + I +KTLAV
Sbjct: 57 SQGLGGFYDPTAYTDTSYGQDKSGKSAAGGGAGNEFDDEPPLLEELGINPNHIFQKTLAV 116
Query: 443 LNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLSMMSVILMY 622
LNP G + +L+DTD+AGP+ SG K F ++YG+ +M I Y
Sbjct: 117 LNPLRGTDQQ-----ILQDTDMAGPLVFCLTLGGFLLLSG-KVTFSYIYGIGVMGCIFFY 170
Query: 623 FLLS 634
LLS
Sbjct: 171 CLLS 174
>UniRef50_Q7S6S5 Cluster: Putative uncharacterized protein
NCU05514.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU05514.1 - Neurospora crassa
Length = 338
Score = 49.2 bits (112), Expect = 8e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I KTLAVLNPF + D L+ D+D+AGP+ SG + HFG++YGL+
Sbjct: 114 IRSKTLAVLNPF---GRIDQ--HLMDDSDMAGPVLFFFLMGTFLLLSG-RVHFGYIYGLA 167
Query: 599 MMSVILMYFLLS 634
+ I ++ +LS
Sbjct: 168 LFGSISLHVILS 179
>UniRef50_Q54QY3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 212
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I KTL+VLNP K D + ++ DTD+ GPI SG K FG++YGL
Sbjct: 58 IRSKTLSVLNPL---KKID--SHIMDDTDLGGPILFGLLLGFSLLMSG-KIQFGYIYGLG 111
Query: 599 MMSVILMYFLLS 634
++ + MY +L+
Sbjct: 112 LIGCVSMYIVLN 123
>UniRef50_O94348 Cluster: Protein transport protein yip1; n=1;
Schizosaccharomyces pombe|Rep: Protein transport protein
yip1 - Schizosaccharomyces pombe (Fission yeast)
Length = 227
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I +KT VLNPF K D + ++ DTD+AGPI G ++HFG++YG++
Sbjct: 71 IKQKTTHVLNPF----KHVDVH-IMDDTDMAGPILFCLLFSTFLSLHG-RSHFGYIYGIA 124
Query: 599 MMSVILMYFLL 631
++ + ++F+L
Sbjct: 125 LLGSLSLHFVL 135
>UniRef50_Q5DHQ9 Cluster: SJCHGC05720 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05720 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I++KT +VL PF S+ +L DTD+AGP+ +G K HF ++YGL
Sbjct: 82 IVQKTSSVLVPFKESSQE-----VLDDTDLAGPLVFCLLFGCTLMFAG-KIHFNYIYGLG 135
Query: 599 MMSVILMYFLLS 634
+ + +Y LLS
Sbjct: 136 VFGCLGIYLLLS 147
>UniRef50_Q5KED8 Cluster: Vesicle-mediated transport-related
protein, putative; n=1; Filobasidiella neoformans|Rep:
Vesicle-mediated transport-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 243
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
IL+K+LAVLNP S+ D + ++ D D+AGP SG K F ++YG+
Sbjct: 85 ILQKSLAVLNP---ASRVD--SHIMDDADLAGPFVFCFAFAFFLLLSG-KPQFSYIYGVG 138
Query: 599 MMSVILMYFLLS 634
++ +Y LL+
Sbjct: 139 LLGTTAIYLLLN 150
>UniRef50_A6NKD5 Cluster: Uncharacterized protein YIPF7; n=34;
Eumetazoa|Rep: Uncharacterized protein YIPF7 - Homo
sapiens (Human)
Length = 256
Score = 42.7 bits (96), Expect = 0.007
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I +KTL VLNP K D + ++ +TD+ GPI +G K FG+VYG+S
Sbjct: 102 IWQKTLTVLNPM----KPVDGS-IMNETDLTGPILFCVALGATLLLAG-KVQFGYVYGMS 155
Query: 599 MMSVILMYFLLS 634
+ ++++ LL+
Sbjct: 156 AIGCLVIHALLN 167
>UniRef50_A3LNS5 Cluster: Predicted protein; n=4;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 243
Score = 41.9 bits (94), Expect = 0.012
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I +KT AVLNP K D ++ D+D+AGPI SG K FG++YG+
Sbjct: 76 IKDKTRAVLNPL----KHDIDPEIMNDSDLAGPILFVLLFGTLLLLSG-KVQFGYIYGVG 130
Query: 599 MMSVILMYFL 628
+ + +++L
Sbjct: 131 VCGTVGLHYL 140
>UniRef50_Q969M3 Cluster: Protein YIPF5; n=18; Euteleostomi|Rep:
Protein YIPF5 - Homo sapiens (Human)
Length = 257
Score = 41.5 bits (93), Expect = 0.016
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I +KTL VL+P K D + ++ +TD+AGP+ +G K FG+VYG+S
Sbjct: 103 IWQKTLTVLHPL----KVADGS-IMNETDLAGPMVFCLAFGATLLLAG-KIQFGYVYGIS 156
Query: 599 MMSVILMYFLLS 634
+ + M+ LL+
Sbjct: 157 AIGCLGMFCLLN 168
>UniRef50_Q4Q8X2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 531
Score = 41.1 bits (92), Expect = 0.022
Identities = 29/72 (40%), Positives = 35/72 (48%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
IL+K AVLNPF S D A +DTD+AGP+ G K F +YGL
Sbjct: 374 ILDKARAVLNPFKPIS-VDAA----KDTDLAGPVLFALSLAVLLSLRG-KIQFSAIYGLF 427
Query: 599 MMSVILMYFLLS 634
M+ V LLS
Sbjct: 428 MLGVGFFKMLLS 439
>UniRef50_Q4DQ58 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 430
Score = 41.1 bits (92), Expect = 0.022
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +2
Query: 428 KTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLSMMS 607
K LAVLNPF ++ A +A + D D+AGPI G K F +YG S++
Sbjct: 275 KALAVLNPF--RAMALEA---VEDMDLAGPIVFAITLAFLLSLQG-KLEFSTIYGHSVLG 328
Query: 608 VILMYFLLS 634
++ + FLLS
Sbjct: 329 IVFVKFLLS 337
>UniRef50_P53039 Cluster: Protein transport protein YIP1; n=8;
Saccharomycetales|Rep: Protein transport protein YIP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 248
Score = 38.7 bits (86), Expect = 0.12
Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Frame = +2
Query: 236 FPTDQQNYSFDQTQGTIPANNNQYYNPNFFTPAPIPG---EATSXXXXXXXXXXXXXXXX 406
F Q + SF T G+ N+ N P P+P A S
Sbjct: 23 FAVPQGSMSFQNTVGSSNTGND---NNLGVAPDPLPVGILHALSTKGYPHEPPLLEEIGI 79
Query: 407 XXXRILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFV 586
I+ KT VL P S +L D+D+AGP+ +G K HFG++
Sbjct: 80 NFDHIITKTKMVLIPIRFGSGVPQE--ILNDSDLAGPLIFFLLFGLFLLMAG-KVHFGYI 136
Query: 587 YGLSMMSVILMYFL 628
YG+++ I ++ L
Sbjct: 137 YGVALFGTISLHNL 150
>UniRef50_Q8SW52 Cluster: Similarity to HYPOTHETICAL INTEGRAL
MEMBRANE PROTEIN YIPA_yeast; n=2; Apansporoblastina|Rep:
Similarity to HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN
YIPA_yeast - Encephalitozoon cuniculi
Length = 198
Score = 38.3 bits (85), Expect = 0.15
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +2
Query: 461 QSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLSMMSVILMYFLLS 634
Q KA D +F+ ++ D++GPI + K HFG++Y +S+++ + +YFLL+
Sbjct: 53 QRKAVDFSFV-KNADLSGPIVFVGLYTLGLILN-YKIHFGYIYFISLLTTLSIYFLLN 108
>UniRef50_A1D9G0 Cluster: Golgi membrane protein, putative; n=7;
Pezizomycotina|Rep: Golgi membrane protein, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 317
Score = 37.9 bits (84), Expect = 0.20
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
I KTL VLNPF ++ D L+ D+D+ G + SG K +G++YG++
Sbjct: 114 IRTKTLTVLNPF---ARIDQ--HLMDDSDLYGALLYIVLYGTFLLLSG-KVFYGYIYGVA 167
Query: 599 MMSVILMYFLLS 634
+ + ++ +LS
Sbjct: 168 VFGTVALHLILS 179
>UniRef50_A4RUK7 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 173
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +2
Query: 416 RILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGL 595
+I +T+ V++PF + D+ D+AGP+ +G K HFG++ G
Sbjct: 23 QIYRRTMGVMHPFRVEDSTDE--------DLAGPLLFCLVMGACNLLAG-KLHFGYILGW 73
Query: 596 SMMSVILMYFLLS 634
S ++ + MY+LL+
Sbjct: 74 STLASLGMYWLLN 86
>UniRef50_Q5CQG6 Cluster: Yip1p like integral membrane protein; n=2;
Cryptosporidium|Rep: Yip1p like integral membrane
protein - Cryptosporidium parvum Iowa II
Length = 481
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 503 DIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLSMMSVILMYFLLS 634
D+AGPI +G K HFG++YG+ ++S I Y LL+
Sbjct: 349 DMAGPILLIACLGFFLLLAG-KIHFGYIYGIGILSCIGTYILLN 391
>UniRef50_A0EHJ1 Cluster: Chromosome undetermined scaffold_97, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_97,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 280
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 491 LRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLSMMSVILMYFLLS 634
L D D++GP+ +G K HF ++YG+ + +L+Y L++
Sbjct: 134 LEDPDLSGPVLIVAALGLLPLLTG-KVHFNYIYGIGLWGWMLLYLLMN 180
>UniRef50_Q9BHB2 Cluster: Voltage-gated chloride channel CLH-6; n=2;
Caenorhabditis|Rep: Voltage-gated chloride channel CLH-6
- Caenorhabditis elegans
Length = 796
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = -2
Query: 406 YFKFVQEGWLIKLIRLTCSFSRYGSRCKKIWIVVLVVVCWNCALRLIKGIVLL 248
Y K ++ W++K + C + G+ +W V++ + +NC L I I+++
Sbjct: 126 YSKDIKFNWILKYLLSKCGEEQRGTTAGCMWTVMIAWIGYNCVLVTIAAILVI 178
>UniRef50_O18118 Cluster: Putative uncharacterized protein pqn-71;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein pqn-71 - Caenorhabditis elegans
Length = 330
Score = 28.3 bits (60), Expect(2) = 8.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 203 GTTAQTLDFQTFPTDQQNYSFDQTQGTIPANNNQYYNPN 319
G+T + P +Q Y QG N NQY NPN
Sbjct: 153 GSTGNMMYNNQDPYNQMQYGGYNQQGNQYQNQNQYQNPN 191
Score = 23.0 bits (47), Expect(2) = 8.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 293 NNNQYYNPNFFTP 331
N NQY N N++ P
Sbjct: 198 NQNQYQNQNYYNP 210
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,643,198
Number of Sequences: 1657284
Number of extensions: 11610334
Number of successful extensions: 27497
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27480
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -